RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 KRTAP29-1A8MX34 341 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 C16orf90A8MZG2 172 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 H0Y9P7 68 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 SPRR1BP22528 89 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 WFDC13Q8IUB5 93 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 LINC00208Q96KT6 92 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 UBR5O95071 2799 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 CCDC168Q8NDH2 2452 aa3.14□□□□□ -1.91
HMGB3P16-201ENST00000508037 CNBPP62633 177 aaKnown RBP3.13□□□□□ -1.91
HMGB3P16-201ENST00000508037 TP53AIP1Q9HCN2 124 aa3.13□□□□□ -1.91
HMGB3P16-201ENST00000508037 ZFYVE26Q68DK2 2539 aa3.13□□□□□ -1.91
HMGB3P16-201ENST00000508037 FLNAP21333 2647 aaKnown RBP3.12□□□□□ -1.91
HMGB3P16-201ENST00000508037 LRCOL1A6NCL2 159 aa3.12□□□□□ -1.91
HMGB3P16-201ENST00000508037 PSPHP1O15172 72 aa3.12□□□□□ -1.91
HMGB3P16-201ENST00000508037 SEC61GP60059 68 aa3.12□□□□□ -1.91
HMGB3P16-201ENST00000508037 KRTAP10-11P60412 298 aa3.12□□□□□ -1.91
HMGB3P16-201ENST00000508037 KRTAP7-1Q8IUC3 87 aa3.12□□□□□ -1.91
HMGB3P16-201ENST00000508037 CRYBG3Q68DQ2 2970 aa3.12□□□□□ -1.91
HMGB3P16-201ENST00000508037 CELSR2Q9HCU4 2923 aa3.11□□□□□ -1.91
HMGB3P16-201ENST00000508037 VPS13CQ709C8 3753 aa3.11□□□□□ -1.91
HMGB3P16-201ENST00000508037 RPL37AP61513 92 aaKnown RBP3.11□□□□□ -1.91
HMGB3P16-201ENST00000508037 PRLHP81277 87 aa3.11□□□□□ -1.91
HMGB3P16-201ENST00000508037 MOBPQ13875 183 aa3.11□□□□□ -1.91
HMGB3P16-201ENST00000508037 AKAP9Q99996 3911 aa3.11□□□□□ -1.91
HMGB3P16-201ENST00000508037 A0A096LNI7 61 aa3.1□□□□□ -1.91
HMGB3P16-201ENST00000508037 A8MUN3 132 aa3.1□□□□□ -1.91
HMGB3P16-201ENST00000508037 CHKB-CPT1BH3BT56 60 aa3.1□□□□□ -1.91
HMGB3P16-201ENST00000508037 PRR4Q16378 134 aa3.1□□□□□ -1.91
HMGB3P16-201ENST00000508037 CASC10Q5T4H9 136 aa3.1□□□□□ -1.91
HMGB3P16-201ENST00000508037 LINC00472Q9H8W2 130 aa3.1□□□□□ -1.91
HMGB3P16-201ENST00000508037 SETD2Q9BYW2 2564 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 MTORP42345 2549 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 IGLV7-46A0A075B6I9 117 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 LOC101927531A0A1B0GV80 90 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 DEFB116Q30KQ4 102 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 Q5VV11 94 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 ATP11AUNQ6ZP68 121 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 Q75L30 129 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 Q8N9P0 234 aaPredicted RBP3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 C9orf163Q8N9P6 203 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 PRR15LQ9BU68 103 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 USP24Q9UPU5 2620 aa3.09□□□□□ -1.91
HMGB3P16-201ENST00000508037 APCP25054 2843 aa3.09□□□□□ -1.92
HMGB3P16-201ENST00000508037 IGKV2-24A0A0C4DH68 120 aa3.08□□□□□ -1.92
HMGB3P16-201ENST00000508037 NDUFS5O43920 106 aa3.08□□□□□ -1.92
HMGB3P16-201ENST00000508037 CDK2AP2O75956 126 aa3.08□□□□□ -1.92
HMGB3P16-201ENST00000508037 COA5Q86WW8 74 aa3.08□□□□□ -1.92
HMGB3P16-201ENST00000508037 ZNF706Q9Y5V0 76 aaPredicted RBP3.08□□□□□ -1.92
HMGB3P16-201ENST00000508037 GCN1Q92616 2671 aaKnown RBP3.08□□□□□ -1.92
HMGB3P16-201ENST00000508037 ACANP16112 2415 aa3.08□□□□□ -1.92
HMGB3P16-201ENST00000508037 MMP24-AS1A0A0U1RRL7 71 aa3.07□□□□□ -1.92
HMGB3P16-201ENST00000508037 A0A1W2PNN7 141 aa3.07□□□□□ -1.92
HMGB3P16-201ENST00000508037 CD164Q04900 197 aa3.07□□□□□ -1.92
HMGB3P16-201ENST00000508037 UBE2DNLQ8IWF7 75 aa3.07□□□□□ -1.92
HMGB3P16-201ENST00000508037 NOTCH2Q04721 2471 aa3.07□□□□□ -1.92
HMGB3P16-201ENST00000508037 A6NED7 52 aa3.06□□□□□ -1.92
HMGB3P16-201ENST00000508037 Q6ZR54 194 aa3.06□□□□□ -1.92
HMGB3P16-201ENST00000508037 A0A0G2JQZ4 141 aa3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 PRB2P02812 416 aaPredicted RBP3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 ASB16-AS1Q495Z4 193 aa3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 PHF5AQ7RTV0 110 aaKnown RBP3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 KTN1-AS1Q86SY8 53 aa3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 C8orf17Q9NRJ1 99 aa3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 LINC01558Q9Y6Z2 57 aa3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 CENPEQ02224 2701 aa3.05□□□□□ -1.92
HMGB3P16-201ENST00000508037 A0A1B0GVX0 72 aa3.04□□□□□ -1.92
HMGB3P16-201ENST00000508037 CDC42SE1Q9NRR8 79 aa3.04□□□□□ -1.92
HMGB3P16-201ENST00000508037 NBEAL2Q6ZNJ1 2754 aa3.04□□□□□ -1.92
HMGB3P16-201ENST00000508037 PDZD2O15018 2839 aa3.03□□□□□ -1.92
HMGB3P16-201ENST00000508037 NF1P21359 2839 aa3.03□□□□□ -1.92
HMGB3P16-201ENST00000508037 LINC00483Q53H64 154 aa3.03□□□□□ -1.92
HMGB3P16-201ENST00000508037 KRTAP13-1Q8IUC0 172 aa3.03□□□□□ -1.92
HMGB3P16-201ENST00000508037 SPTSSBQ8NFR3 76 aa3.03□□□□□ -1.92
HMGB3P16-201ENST00000508037 MRPL34Q9BQ48 92 aaKnown RBP3.03□□□□□ -1.92
HMGB3P16-201ENST00000508037 KMT2BQ9UMN6 2715 aaPredicted RBP3.02□□□□□ -1.93
HMGB3P16-201ENST00000508037 NBPF19A0A087WUL8 3843 aa3.02□□□□□ -1.93
HMGB3P16-201ENST00000508037 KRTAP24-1Q3LI83 254 aa3.02□□□□□ -1.93
HMGB3P16-201ENST00000508037 PLAC8Q9NZF1 115 aa3.02□□□□□ -1.93
HMGB3P16-201ENST00000508037 CSMD2Q7Z408 3487 aa3.02□□□□□ -1.93
HMGB3P16-201ENST00000508037 IGHV6-1A0A0B4J1U7 121 aa3.01□□□□□ -1.93
HMGB3P16-201ENST00000508037 IGLV9-49A0A0B4J1Y8 123 aa3.01□□□□□ -1.93
HMGB3P16-201ENST00000508037 CHTF8P0CG12 524 aa3.01□□□□□ -1.93
HMGB3P16-201ENST00000508037 PCOTHQ58A44 107 aa3.01□□□□□ -1.93
HMGB3P16-201ENST00000508037 Q96NJ1 140 aa3.01□□□□□ -1.93
HMGB3P16-201ENST00000508037 KRTAP1-5Q9BYS1 174 aa3.01□□□□□ -1.93
HMGB3P16-201ENST00000508037 C8orf87E5RJ46 101 aa3□□□□□ -1.93
HMGB3P16-201ENST00000508037 K7EIL1 84 aa3□□□□□ -1.93
HMGB3P16-201ENST00000508037 SPAG11AQ6PDA7 123 aa3□□□□□ -1.93
HMGB3P16-201ENST00000508037 C7orf65Q6ZTY9 151 aa3□□□□□ -1.93
HMGB3P16-201ENST00000508037 LCA10Q71F78 164 aa3□□□□□ -1.93
HMGB3P16-201ENST00000508037 KRTAP11-1Q8IUC1 163 aa3□□□□□ -1.93
HMGB3P16-201ENST00000508037 APLNQ9ULZ1 77 aa3□□□□□ -1.93
HMGB3P16-201ENST00000508037 ANK3Q12955 4377 aaKnown RBP3□□□□□ -1.93
HMGB3P16-201ENST00000508037 NBDYA0A0U1RRE5 68 aa2.99□□□□□ -1.93
HMGB3P16-201ENST00000508037 A6NN06 94 aa2.99□□□□□ -1.93
HMGB3P16-201ENST00000508037 HRES1P13985 223 aa2.99□□□□□ -1.93
HMGB3P16-201ENST00000508037 ACYP2P14621 99 aa2.99□□□□□ -1.93
HMGB3P16-201ENST00000508037 SPACA4Q8TDM5 124 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms