RNA–Protein interactions for RNA: ENST00000503509.1

SERF1A-203, Transcript of small EDRK-rich factor 1A, humanhuman

TSL 2

Gene SERF1A, Length 632 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1A-203ENST00000503509 HRNRQ86YZ3 2850 aaPredicted RBP0.16□□□□□ -2.38
SERF1A-203ENST00000503509 HIVEP3Q5T1R4 2406 aa0.16□□□□□ -2.38
SERF1A-203ENST00000503509 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
SERF1A-203ENST00000503509 PRXQ9BXM0 1461 aa0.16□□□□□ -2.38
SERF1A-203ENST00000503509 KIF1AQ12756 1690 aa0.15□□□□□ -2.39
SERF1A-203ENST00000503509 ALS2Q96Q42 1657 aa0.15□□□□□ -2.39
SERF1A-203ENST00000503509 DEFB130BP0DP73 79 aa0.15□□□□□ -2.39
SERF1A-203ENST00000503509 DEFB130AP0DP74 79 aa0.15□□□□□ -2.39
SERF1A-203ENST00000503509 SPRR2BP35325 72 aa0.15□□□□□ -2.39
SERF1A-203ENST00000503509 AKAP6Q13023 2319 aa0.15□□□□□ -2.39
SERF1A-203ENST00000503509 HSPG2P98160 4391 aa0.15□□□□□ -2.39
SERF1A-203ENST00000503509 SYNE2Q8WXH0 6885 aaKnown RBP0.14□□□□□ -2.39
SERF1A-203ENST00000503509 NCOR2Q9Y618 2525 aa0.14□□□□□ -2.39
SERF1A-203ENST00000503509 PKDREJQ9NTG1 2253 aa0.13□□□□□ -2.39
SERF1A-203ENST00000503509 CPS1P31327 1500 aa0.13□□□□□ -2.39
SERF1A-203ENST00000503509 CLASP1Q7Z460 1538 aa0.13□□□□□ -2.39
SERF1A-203ENST00000503509 H0YGG7 62 aa0.13□□□□□ -2.39
SERF1A-203ENST00000503509 UGGT1Q9NYU2 1555 aa0.13□□□□□ -2.39
SERF1A-203ENST00000503509 PREX2Q70Z35 1606 aa0.13□□□□□ -2.39
SERF1A-203ENST00000503509 SYCP2Q9BX26 1530 aa0.13□□□□□ -2.39
SERF1A-203ENST00000503509 PTPN13Q12923 2485 aa0.12□□□□□ -2.39
SERF1A-203ENST00000503509 DOPEY2Q9Y3R5 2298 aa0.12□□□□□ -2.39
SERF1A-203ENST00000503509 LRP1BQ9NZR2 4599 aa0.12□□□□□ -2.39
SERF1A-203ENST00000503509 SMIM5Q71RC9 77 aa0.12□□□□□ -2.39
SERF1A-203ENST00000503509 BSNQ9UPA5 3926 aa0.12□□□□□ -2.39
SERF1A-203ENST00000503509 EP300Q09472 2414 aaPredicted RBP0.12□□□□□ -2.39
SERF1A-203ENST00000503509 IGF2RP11717 2491 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 HMCN2Q8NDA2 5059 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 FSIP2Q5CZC0 6907 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 ATRQ13535 2644 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 IGSF10Q6WRI0 2623 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 NCOR1O75376 2440 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 MINOS1Q5TGZ0 78 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 EEA1Q15075 1411 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 MACF1Q9UPN3 7388 aaKnown RBP0.11□□□□□ -2.39
SERF1A-203ENST00000503509 CROCC2H7BZ55 1655 aa0.11□□□□□ -2.39
SERF1A-203ENST00000503509 AKAP13Q12802 2813 aa0.1□□□□□ -2.39
SERF1A-203ENST00000503509 CNOT1A5YKK6 2376 aaKnown RBP0.1□□□□□ -2.39
SERF1A-203ENST00000503509 CELSR1Q9NYQ6 3014 aa0.1□□□□□ -2.39
SERF1A-203ENST00000503509 K7EMI3 77 aa0.1□□□□□ -2.39
SERF1A-203ENST00000503509 M0R1W7 72 aa0.1□□□□□ -2.39
SERF1A-203ENST00000503509 RPS27P42677 84 aaKnown RBP0.1□□□□□ -2.39
SERF1A-203ENST00000503509 RPS27LQ71UM5 84 aaKnown RBP0.1□□□□□ -2.39
SERF1A-203ENST00000503509 DEFB106AQ8N104 65 aa0.1□□□□□ -2.39
SERF1A-203ENST00000503509 TRANK1O15050 2925 aa0.1□□□□□ -2.39
SERF1A-203ENST00000503509 PKD1L1Q8TDX9 2849 aa0.09□□□□□ -2.39
SERF1A-203ENST00000503509 NCBP2-AS2Q69YL0 99 aa0.09□□□□□ -2.4
SERF1A-203ENST00000503509 C6orf48Q9UBA6 75 aa0.09□□□□□ -2.4
SERF1A-203ENST00000503509 HECTD4Q9Y4D8 3996 aa0.09□□□□□ -2.4
SERF1A-203ENST00000503509 ABCA2Q9BZC7 2435 aa0.08□□□□□ -2.4
SERF1A-203ENST00000503509 PRLHP81277 87 aa0.08□□□□□ -2.4
SERF1A-203ENST00000503509 S4R3F8 94 aa0.08□□□□□ -2.4
SERF1A-203ENST00000503509 CDC42BPAQ5VT25 1732 aa0.07□□□□□ -2.4
SERF1A-203ENST00000503509 TOGARAM1Q9Y4F4 1720 aa0.07□□□□□ -2.4
SERF1A-203ENST00000503509 LRP2P98164 4655 aa0.07□□□□□ -2.4
SERF1A-203ENST00000503509 DMBT1Q9UGM3 2413 aaPredicted RBP0.07□□□□□ -2.4
SERF1A-203ENST00000503509 PKD1P98161 4303 aa0.07□□□□□ -2.4
SERF1A-203ENST00000503509 FCER1GP30273 86 aa0.07□□□□□ -2.4
SERF1A-203ENST00000503509 SERF2P84101 59 aa0.07□□□□□ -2.4
SERF1A-203ENST00000503509 NMES1Q9C002 83 aa0.07□□□□□ -2.4
SERF1A-203ENST00000503509 PKHD1P08F94 4074 aa0.07□□□□□ -2.4
SERF1A-203ENST00000503509 MROH2AA6NES4 1674 aa0.06□□□□□ -2.4
SERF1A-203ENST00000503509 IGIPA6NJ69 53 aa0.06□□□□□ -2.4
SERF1A-203ENST00000503509 WT1-ASQ06250 92 aa0.06□□□□□ -2.4
SERF1A-203ENST00000503509 ANKRD36CQ5JPF3 1778 aa0.06□□□□□ -2.4
SERF1A-203ENST00000503509 FLNCQ14315 2725 aa0.05□□□□□ -2.4
SERF1A-203ENST00000503509 SPRR2GQ9BYE4 73 aa0.05□□□□□ -2.4
SERF1A-203ENST00000503509 NSD1Q96L73 2696 aaPredicted RBP0.05□□□□□ -2.4
SERF1A-203ENST00000503509 UBR5O95071 2799 aaPredicted RBP0.05□□□□□ -2.4
SERF1A-203ENST00000503509 SPRR2AP35326 72 aa0.04□□□□□ -2.4
SERF1A-203ENST00000503509 KRTAP6-2Q3LI66 62 aa0.04□□□□□ -2.4
SERF1A-203ENST00000503509 NRXN3Q9Y4C0 1643 aa0.04□□□□□ -2.4
SERF1A-203ENST00000503509 CSPG4Q6UVK1 2322 aa0.04□□□□□ -2.4
SERF1A-203ENST00000503509 SPTA1P02549 2419 aa0.04□□□□□ -2.4
SERF1A-203ENST00000503509 COL7A1Q02388 2944 aa0.03□□□□□ -2.4
SERF1A-203ENST00000503509 AGLP35573 1532 aa0.03□□□□□ -2.4
SERF1A-203ENST00000503509 SETXQ7Z333 2677 aaKnown RBP0.03□□□□□ -2.4
SERF1A-203ENST00000503509 COL6A3P12111 3177 aa0.03□□□□□ -2.4
SERF1A-203ENST00000503509 ADCY10Q96PN6 1610 aa0.03□□□□□ -2.4
SERF1A-203ENST00000503509 FAT3Q8TDW7 4589 aa0.03□□□□□ -2.4
SERF1A-203ENST00000503509 SSPOA2VEC9 5147 aa0.03□□□□□ -2.41
SERF1A-203ENST00000503509 FANCD2Q9BXW9 1451 aa0.03□□□□□ -2.41
SERF1A-203ENST00000503509 ABCA5Q8WWZ7 1642 aa0.02□□□□□ -2.41
SERF1A-203ENST00000503509 C9orf92A6NGG3 77 aa0.02□□□□□ -2.41
SERF1A-203ENST00000503509 BPTFQ12830 3046 aa0.01□□□□□ -2.41
SERF1A-203ENST00000503509 H3BNG1 76 aa0.01□□□□□ -2.41
SERF1A-203ENST00000503509 TMEM167BQ9NRX6 74 aa0.01□□□□□ -2.41
SERF1A-203ENST00000503509 EFCAB6Q5THR3 1501 aa0.01□□□□□ -2.41
SERF1A-203ENST00000503509 KNL1Q8NG31 2342 aa0.01□□□□□ -2.41
SERF1A-203ENST00000503509 TNRC18O15417 2968 aaPredicted RBP0□□□□□ -2.41
SERF1A-203ENST00000503509 H3BUA1 57 aa0□□□□□ -2.41
SERF1A-203ENST00000503509 ABCC8Q09428 1581 aa0□□□□□ -2.41
SERF1A-203ENST00000503509 ANK3Q12955 4377 aaKnown RBP0□□□□□ -2.41
SERF1A-203ENST00000503509 CREBBPQ92793 2442 aa0□□□□□ -2.41
SERF1A-203ENST00000503509 PCNX1Q96RV3 2341 aa0□□□□□ -2.41
SERF1A-203ENST00000503509 CHD8Q9HCK8 2581 aa0□□□□□ -2.41
SERF1A-203ENST00000503509 PRRC2CQ9Y520 2896 aaKnown RBP0□□□□□ -2.41
SERF1A-203ENST00000503509 TIMM8BQ9Y5J9 83 aaPredicted RBP0□□□□□ -2.41
SERF1A-203ENST00000503509 DSPP15924 2871 aaKnown RBP-0□□□□□ -2.41
SERF1A-203ENST00000503509 ACANP16112 2415 aa-0.01□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms