RNA–Protein interactions for RNA: ENST00000500728.2

LRPAP1-202, Transcript of LDL receptor related protein associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRPAP1, Length 7,819 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPAP1-202ENST00000500728 ATRQ13535 2644 aa7.78□□□□□ -1.16
LRPAP1-202ENST00000500728 CELSR3Q9NYQ7 3312 aa7.77□□□□□ -1.17
LRPAP1-202ENST00000500728 MMP24-AS1A0A0U1RRL7 71 aa7.75□□□□□ -1.17
LRPAP1-202ENST00000500728 R4GN34 69 aa7.73□□□□□ -1.17
LRPAP1-202ENST00000500728 OXTP01178 125 aa7.71□□□□□ -1.17
LRPAP1-202ENST00000500728 SEC61BP60468 96 aaKnown RBP7.71□□□□□ -1.17
LRPAP1-202ENST00000500728 ZCCHC13Q8WW36 166 aaKnown RBP7.71□□□□□ -1.17
LRPAP1-202ENST00000500728 ROMO1P60602 79 aa7.71□□□□□ -1.18
LRPAP1-202ENST00000500728 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
LRPAP1-202ENST00000500728 MAST4O15021 2626 aa7.7□□□□□ -1.18
LRPAP1-202ENST00000500728 CFAP46Q8IYW2 2715 aa7.7□□□□□ -1.18
LRPAP1-202ENST00000500728 Q5W150 140 aa7.7□□□□□ -1.18
LRPAP1-202ENST00000500728 FLNAP21333 2647 aaKnown RBP7.69□□□□□ -1.18
LRPAP1-202ENST00000500728 ITPR3Q14573 2671 aa7.69□□□□□ -1.18
LRPAP1-202ENST00000500728 FLNBO75369 2602 aaKnown RBP7.68□□□□□ -1.18
LRPAP1-202ENST00000500728 TRIOO75962 3097 aa7.67□□□□□ -1.18
LRPAP1-202ENST00000500728 REV3LO60673 3130 aa7.66□□□□□ -1.18
LRPAP1-202ENST00000500728 CHD6Q8TD26 2715 aa7.66□□□□□ -1.18
LRPAP1-202ENST00000500728 KRTAP1-3Q8IUG1 177 aa7.65□□□□□ -1.19
LRPAP1-202ENST00000500728 Q8NDZ9 215 aa7.64□□□□□ -1.19
LRPAP1-202ENST00000500728 RPL37P61927 97 aaKnown RBP7.63□□□□□ -1.19
LRPAP1-202ENST00000500728 RANBP2P49792 3224 aaKnown RBP7.61□□□□□ -1.19
LRPAP1-202ENST00000500728 H1FX-AS1Q4G0G2 97 aa7.61□□□□□ -1.19
LRPAP1-202ENST00000500728 KRTAP16-1A8MUX0 517 aa7.61□□□□□ -1.19
LRPAP1-202ENST00000500728 LINC00472Q9H8W2 130 aa7.61□□□□□ -1.19
LRPAP1-202ENST00000500728 BRCA2P51587 3418 aa7.59□□□□□ -1.19
LRPAP1-202ENST00000500728 CENPEQ02224 2701 aa7.58□□□□□ -1.2
LRPAP1-202ENST00000500728 DNAH14Q0VDD8 3507 aa7.58□□□□□ -1.2
LRPAP1-202ENST00000500728 KRTAP1-1Q07627 177 aa7.58□□□□□ -1.2
LRPAP1-202ENST00000500728 NBEAL1Q6ZS30 2694 aa7.58□□□□□ -1.2
LRPAP1-202ENST00000500728 VPS13AQ96RL7 3174 aa7.57□□□□□ -1.2
LRPAP1-202ENST00000500728 M0QZ58 72 aa7.56□□□□□ -1.2
LRPAP1-202ENST00000500728 DMBT1Q9UGM3 2413 aaPredicted RBP7.55□□□□□ -1.2
LRPAP1-202ENST00000500728 LAMA3Q16787 3333 aa7.55□□□□□ -1.2
LRPAP1-202ENST00000500728 PRUNE2Q8WUY3 3088 aa7.55□□□□□ -1.2
LRPAP1-202ENST00000500728 TEX15Q9BXT5 2789 aa7.55□□□□□ -1.2
LRPAP1-202ENST00000500728 SPATA8Q6RVD6 105 aa7.55□□□□□ -1.2
LRPAP1-202ENST00000500728 SPRR1AP35321 89 aa7.54□□□□□ -1.2
LRPAP1-202ENST00000500728 PLAC8Q9NZF1 115 aa7.54□□□□□ -1.2
LRPAP1-202ENST00000500728 CHD7Q9P2D1 2997 aa7.5□□□□□ -1.21
LRPAP1-202ENST00000500728 LCE6AA0A183 80 aa7.5□□□□□ -1.21
LRPAP1-202ENST00000500728 KRTAP26-1Q6PEX3 210 aa7.5□□□□□ -1.21
LRPAP1-202ENST00000500728 UNC80Q8N2C7 3258 aa7.5□□□□□ -1.21
LRPAP1-202ENST00000500728 MGAQ8IWI9 3026 aa7.5□□□□□ -1.21
LRPAP1-202ENST00000500728 ADM2Q7Z4H4 148 aa7.49□□□□□ -1.21
LRPAP1-202ENST00000500728 ASB16-AS1Q495Z4 193 aa7.49□□□□□ -1.21
LRPAP1-202ENST00000500728 STAB1Q9NY15 2570 aa7.48□□□□□ -1.21
LRPAP1-202ENST00000500728 HELZ2Q9BYK8 2649 aaKnown RBP7.47□□□□□ -1.21
LRPAP1-202ENST00000500728 WDFY4Q6ZS81 3184 aa7.46□□□□□ -1.22
LRPAP1-202ENST00000500728 CDH23Q9H251 3354 aa7.45□□□□□ -1.22
LRPAP1-202ENST00000500728 SPRR1BP22528 89 aa7.43□□□□□ -1.22
LRPAP1-202ENST00000500728 Q6ZR54 194 aa7.43□□□□□ -1.22
LRPAP1-202ENST00000500728 KRTAP10-1P60331 282 aa7.42□□□□□ -1.22
LRPAP1-202ENST00000500728 KRTAP1-5Q9BYS1 174 aa7.42□□□□□ -1.22
LRPAP1-202ENST00000500728 KRTAP25-1Q3LHN0 102 aa7.41□□□□□ -1.22
LRPAP1-202ENST00000500728 KRTAP10-2P60368 255 aa7.4□□□□□ -1.22
LRPAP1-202ENST00000500728 COL6A5A8TX70 2615 aa7.39□□□□□ -1.23
LRPAP1-202ENST00000500728 FRYQ5TBA9 3013 aa7.38□□□□□ -1.23
LRPAP1-202ENST00000500728 UNC79Q9P2D8 2635 aa7.37□□□□□ -1.23
LRPAP1-202ENST00000500728 A6NN06 94 aa7.37□□□□□ -1.23
LRPAP1-202ENST00000500728 NDUFAF8A1L188 74 aa7.37□□□□□ -1.23
LRPAP1-202ENST00000500728 GCN1Q92616 2671 aaKnown RBP7.36□□□□□ -1.23
LRPAP1-202ENST00000500728 SZT2Q5T011 3432 aa7.36□□□□□ -1.23
LRPAP1-202ENST00000500728 C20orf166-AS1Q96NR2 134 aa7.35□□□□□ -1.23
LRPAP1-202ENST00000500728 MAP1AP78559 2803 aaPredicted RBP7.35□□□□□ -1.23
LRPAP1-202ENST00000500728 STAB2Q8WWQ8 2551 aa7.33□□□□□ -1.24
LRPAP1-202ENST00000500728 NOTCH1P46531 2555 aa7.32□□□□□ -1.24
LRPAP1-202ENST00000500728 A8MU10 97 aa7.32□□□□□ -1.24
LRPAP1-202ENST00000500728 KRTAP29-1A8MX34 341 aaPredicted RBP7.31□□□□□ -1.24
LRPAP1-202ENST00000500728 TEP1Q99973 2627 aaKnown RBP7.31□□□□□ -1.24
LRPAP1-202ENST00000500728 NBEAL2Q6ZNJ1 2754 aa7.3□□□□□ -1.24
LRPAP1-202ENST00000500728 KALRNO60229 2985 aa7.3□□□□□ -1.24
LRPAP1-202ENST00000500728 PANO1I0J062 215 aa7.29□□□□□ -1.24
LRPAP1-202ENST00000500728 COL6A3P12111 3177 aa7.29□□□□□ -1.24
LRPAP1-202ENST00000500728 A0A087X002 238 aa7.28□□□□□ -1.24
LRPAP1-202ENST00000500728 CFAP47Q6ZTR5 3102 aa7.28□□□□□ -1.24
LRPAP1-202ENST00000500728 VCANP13611 3396 aa7.25□□□□□ -1.25
LRPAP1-202ENST00000500728 NOTCH2NLQ7Z3S9 236 aa7.25□□□□□ -1.25
LRPAP1-202ENST00000500728 SPEGQ15772 3267 aa7.24□□□□□ -1.25
LRPAP1-202ENST00000500728 TRANK1O15050 2925 aa7.23□□□□□ -1.25
LRPAP1-202ENST00000500728 KRTAP4-16G5E9R7 235 aaPredicted RBP7.22□□□□□ -1.25
LRPAP1-202ENST00000500728 CRYBG3Q68DQ2 2970 aa7.22□□□□□ -1.25
LRPAP1-202ENST00000500728 DSPP15924 2871 aaKnown RBP7.21□□□□□ -1.25
LRPAP1-202ENST00000500728 SETXQ7Z333 2677 aaKnown RBP7.2□□□□□ -1.26
LRPAP1-202ENST00000500728 DMXL2Q8TDJ6 3036 aa7.2□□□□□ -1.26
LRPAP1-202ENST00000500728 A8MUU9 505 aa7.2□□□□□ -1.26
LRPAP1-202ENST00000500728 BAHCC1Q9P281 2608 aa7.19□□□□□ -1.26
LRPAP1-202ENST00000500728 HTTP42858 3142 aa7.19□□□□□ -1.26
LRPAP1-202ENST00000500728 LAMA1P25391 3075 aa7.19□□□□□ -1.26
LRPAP1-202ENST00000500728 APCP25054 2843 aa7.17□□□□□ -1.26
LRPAP1-202ENST00000500728 ASH1LQ9NR48 2969 aaKnown RBP7.15□□□□□ -1.27
LRPAP1-202ENST00000500728 C10orf95Q9H7T3 257 aa7.13□□□□□ -1.27
LRPAP1-202ENST00000500728 LRBAP50851 2863 aa7.12□□□□□ -1.27
LRPAP1-202ENST00000500728 ITPR2Q14571 2701 aa7.11□□□□□ -1.27
LRPAP1-202ENST00000500728 KRTAP11-1Q8IUC1 163 aa7.1□□□□□ -1.27
LRPAP1-202ENST00000500728 ZNF292O60281 2723 aa7.08□□□□□ -1.28
LRPAP1-202ENST00000500728 COL12A1Q99715 3063 aa7.06□□□□□ -1.28
LRPAP1-202ENST00000500728 CHD9Q3L8U1 2897 aa7.04□□□□□ -1.28
LRPAP1-202ENST00000500728 BOD1L1Q8NFC6 3051 aa7.03□□□□□ -1.28
LRPAP1-202ENST00000500728 USP34Q70CQ2 3546 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms