RNA–Protein interactions for RNA: ENST00000496843.1

PALMD-202, Transcript of palmdelphin, humanhuman

TSL 1 (best)

Gene PALMD, Length 5,294 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALMD-202ENST00000496843 SETD2Q9BYW2 2564 aaPredicted RBP3.08□□□□□ -1.92
PALMD-202ENST00000496843 ANKRD17O75179 2603 aaKnown RBP3.08□□□□□ -1.92
PALMD-202ENST00000496843 INE1O15225 51 aa3.07□□□□□ -1.92
PALMD-202ENST00000496843 COL4A5P29400 1685 aa3.07□□□□□ -1.92
PALMD-202ENST00000496843 PLAC8Q9NZF1 115 aa3.07□□□□□ -1.92
PALMD-202ENST00000496843 USP9YO00507 2555 aaPredicted RBP3.07□□□□□ -1.92
PALMD-202ENST00000496843 BDP1A6H8Y1 2624 aa3.06□□□□□ -1.92
PALMD-202ENST00000496843 STAB2Q8WWQ8 2551 aa3.04□□□□□ -1.92
PALMD-202ENST00000496843 H0YAA0 97 aa3.03□□□□□ -1.92
PALMD-202ENST00000496843 PRO2289Q9P1D8 64 aa3.03□□□□□ -1.92
PALMD-202ENST00000496843 ZFHX2Q9C0A1 2572 aaPredicted RBP3.03□□□□□ -1.92
PALMD-202ENST00000496843 PCSK5Q92824 1860 aa3.02□□□□□ -1.93
PALMD-202ENST00000496843 CHD8Q9HCK8 2581 aa3.02□□□□□ -1.93
PALMD-202ENST00000496843 HECTD1Q9ULT8 2610 aa3.01□□□□□ -1.93
PALMD-202ENST00000496843 FASNP49327 2511 aaKnown RBP3.01□□□□□ -1.93
PALMD-202ENST00000496843 KRTAP10-11P60412 298 aa2.97□□□□□ -1.93
PALMD-202ENST00000496843 LTBP2Q14767 1821 aa2.96□□□□□ -1.94
PALMD-202ENST00000496843 Q6ZRN7 208 aaPredicted RBP2.95□□□□□ -1.94
PALMD-202ENST00000496843 COL27A1Q8IZC6 1860 aaPredicted RBP2.95□□□□□ -1.94
PALMD-202ENST00000496843 PIEZO2Q9H5I5 2752 aa2.95□□□□□ -1.94
PALMD-202ENST00000496843 Q5VSD8 79 aa2.95□□□□□ -1.94
PALMD-202ENST00000496843 IGF2RP11717 2491 aa2.94□□□□□ -1.94
PALMD-202ENST00000496843 RPS29P62273 56 aaKnown RBP2.92□□□□□ -1.94
PALMD-202ENST00000496843 USP24Q9UPU5 2620 aa2.89□□□□□ -1.95
PALMD-202ENST00000496843 KRTAP12-2P59991 146 aa2.88□□□□□ -1.95
PALMD-202ENST00000496843 TPRXLQ17RH7 258 aa2.88□□□□□ -1.95
PALMD-202ENST00000496843 HELZ2Q9BYK8 2649 aaKnown RBP2.86□□□□□ -1.95
PALMD-202ENST00000496843 BAHCC1Q9P281 2608 aa2.86□□□□□ -1.95
PALMD-202ENST00000496843 MUC22E2RYF6 1773 aaPredicted RBP2.86□□□□□ -1.95
PALMD-202ENST00000496843 KRTAP13-2Q52LG2 175 aa2.85□□□□□ -1.95
PALMD-202ENST00000496843 MGAM2Q2M2H8 2515 aa2.84□□□□□ -1.95
PALMD-202ENST00000496843 COL4A4P53420 1690 aaPredicted RBP2.84□□□□□ -1.95
PALMD-202ENST00000496843 KRTAP15-1Q3LI76 137 aa2.84□□□□□ -1.96
PALMD-202ENST00000496843 KRTAP10-3P60369 221 aa2.84□□□□□ -1.96
PALMD-202ENST00000496843 IGSF10Q6WRI0 2623 aa2.83□□□□□ -1.96
PALMD-202ENST00000496843 NBEAL1Q6ZS30 2694 aa2.82□□□□□ -1.96
PALMD-202ENST00000496843 STAB1Q9NY15 2570 aa2.82□□□□□ -1.96
PALMD-202ENST00000496843 KRTAP13-4Q3LI77 160 aa2.81□□□□□ -1.96
PALMD-202ENST00000496843 EP400Q96L91 3159 aa2.81□□□□□ -1.96
PALMD-202ENST00000496843 KRTAP10-1P60331 282 aa2.8□□□□□ -1.96
PALMD-202ENST00000496843 KRTAP1-5Q9BYS1 174 aa2.79□□□□□ -1.96
PALMD-202ENST00000496843 CHD6Q8TD26 2715 aa2.79□□□□□ -1.96
PALMD-202ENST00000496843 CENPEQ02224 2701 aa2.79□□□□□ -1.96
PALMD-202ENST00000496843 NSD1Q96L73 2696 aaPredicted RBP2.77□□□□□ -1.97
PALMD-202ENST00000496843 COL4A2P08572 1712 aa2.77□□□□□ -1.97
PALMD-202ENST00000496843 TEP1Q99973 2627 aaKnown RBP2.76□□□□□ -1.97
PALMD-202ENST00000496843 SRCAPQ6ZRS2 3230 aa2.75□□□□□ -1.97
PALMD-202ENST00000496843 KRTAP13-1Q8IUC0 172 aa2.75□□□□□ -1.97
PALMD-202ENST00000496843 CEP295Q9C0D2 2601 aa2.74□□□□□ -1.97
PALMD-202ENST00000496843 KRTAP10-2P60368 255 aa2.74□□□□□ -1.97
PALMD-202ENST00000496843 ATRQ13535 2644 aa2.74□□□□□ -1.97
PALMD-202ENST00000496843 NOTCH1P46531 2555 aa2.73□□□□□ -1.97
PALMD-202ENST00000496843 KRTAP12-1P59990 96 aa2.71□□□□□ -1.98
PALMD-202ENST00000496843 KRTAP7-1Q8IUC3 87 aa2.71□□□□□ -1.98
PALMD-202ENST00000496843 UNC79Q9P2D8 2635 aa2.69□□□□□ -1.98
PALMD-202ENST00000496843 MAST4O15021 2626 aa2.68□□□□□ -1.98
PALMD-202ENST00000496843 A0A1B0GVY2 172 aa2.68□□□□□ -1.98
PALMD-202ENST00000496843 KRTAP10-10P60014 251 aa2.66□□□□□ -1.98
PALMD-202ENST00000496843 BPTFQ12830 3046 aa2.65□□□□□ -1.99
PALMD-202ENST00000496843 XP32Q5T750 250 aa2.64□□□□□ -1.99
PALMD-202ENST00000496843 KRTAP3-3Q9BYR6 98 aa2.62□□□□□ -1.99
PALMD-202ENST00000496843 KRTAP3-2Q9BYR7 98 aa2.62□□□□□ -1.99
PALMD-202ENST00000496843 ITPR3Q14573 2671 aa2.61□□□□□ -1.99
PALMD-202ENST00000496843 UTP20O75691 2785 aaKnown RBP2.61□□□□□ -1.99
PALMD-202ENST00000496843 AKAP13Q12802 2813 aa2.61□□□□□ -1.99
PALMD-202ENST00000496843 CFAP46Q8IYW2 2715 aa2.6□□□□□ -1.99
PALMD-202ENST00000496843 UTRNP46939 3433 aa2.6□□□□□ -1.99
PALMD-202ENST00000496843 KRTAP13-3Q3SY46 172 aa2.6□□□□□ -1.99
PALMD-202ENST00000496843 ANKRD11Q6UB99 2663 aaPredicted RBP2.59□□□□□ -2
PALMD-202ENST00000496843 KRTAP1-1Q07627 177 aa2.58□□□□□ -2
PALMD-202ENST00000496843 PRRC2CQ9Y520 2896 aaKnown RBP2.58□□□□□ -2
PALMD-202ENST00000496843 GOLGB1Q14789 3259 aaKnown RBP2.57□□□□□ -2
PALMD-202ENST00000496843 CEP350Q5VT06 3117 aa2.57□□□□□ -2
PALMD-202ENST00000496843 KRTAP1-3Q8IUG1 177 aa2.56□□□□□ -2
PALMD-202ENST00000496843 COL6A5A8TX70 2615 aa2.55□□□□□ -2
PALMD-202ENST00000496843 WDR87Q6ZQQ6 2873 aa2.52□□□□□ -2.01
PALMD-202ENST00000496843 GCN1Q92616 2671 aaKnown RBP2.51□□□□□ -2.01
PALMD-202ENST00000496843 SETXQ7Z333 2677 aaKnown RBP2.51□□□□□ -2.01
PALMD-202ENST00000496843 KRTAP1-4P0C5Y4 121 aa2.51□□□□□ -2.01
PALMD-202ENST00000496843 TNRC18O15417 2968 aaPredicted RBP2.5□□□□□ -2.01
PALMD-202ENST00000496843 KMT2BQ9UMN6 2715 aaPredicted RBP2.49□□□□□ -2.01
PALMD-202ENST00000496843 KRTAP10-6P60371 365 aaPredicted RBP2.49□□□□□ -2.01
PALMD-202ENST00000496843 PCNTO95613 3336 aa2.48□□□□□ -2.01
PALMD-202ENST00000496843 KRTAP10-5P60370 271 aa2.48□□□□□ -2.01
PALMD-202ENST00000496843 CRCT1Q9UGL9 99 aa2.48□□□□□ -2.01
PALMD-202ENST00000496843 KRTAP3-1Q9BYR8 98 aa2.44□□□□□ -2.02
PALMD-202ENST00000496843 HTTP42858 3142 aa2.43□□□□□ -2.02
PALMD-202ENST00000496843 KRTAP12-3P60328 96 aa2.42□□□□□ -2.02
PALMD-202ENST00000496843 KRTAP10-12P60413 245 aa2.42□□□□□ -2.02
PALMD-202ENST00000496843 FLNBO75369 2602 aaKnown RBP2.42□□□□□ -2.02
PALMD-202ENST00000496843 UBR5O95071 2799 aaPredicted RBP2.41□□□□□ -2.02
PALMD-202ENST00000496843 TENM3Q9P273 2699 aa2.41□□□□□ -2.02
PALMD-202ENST00000496843 FLNAP21333 2647 aaKnown RBP2.4□□□□□ -2.02
PALMD-202ENST00000496843 TGP01266 2768 aa2.37□□□□□ -2.03
PALMD-202ENST00000496843 KRTAP10-7P60409 375 aaPredicted RBP2.37□□□□□ -2.03
PALMD-202ENST00000496843 ITPR2Q14571 2701 aa2.37□□□□□ -2.03
PALMD-202ENST00000496843 BRCA2P51587 3418 aa2.36□□□□□ -2.03
PALMD-202ENST00000496843 ITPR1Q14643 2758 aa2.36□□□□□ -2.03
PALMD-202ENST00000496843 A0A0C4DFX4 3053 aa2.35□□□□□ -2.03
PALMD-202ENST00000496843 MAP1AP78559 2803 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms