RNA–Protein interactions for RNA: ENST00000495190.1

VPS8-226, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 756 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-226ENST00000495190 LAMA1P25391 3075 aa2.65□□□□□ -1.99
VPS8-226ENST00000495190 H3BNG1 76 aa2.64□□□□□ -1.99
VPS8-226ENST00000495190 HRES1P13985 223 aa2.64□□□□□ -1.99
VPS8-226ENST00000495190 LINC01554Q52M75 96 aa2.64□□□□□ -1.99
VPS8-226ENST00000495190 KRTAP26-1Q6PEX3 210 aa2.64□□□□□ -1.99
VPS8-226ENST00000495190 KRTAP13-1Q8IUC0 172 aa2.64□□□□□ -1.99
VPS8-226ENST00000495190 ABCA2Q9BZC7 2435 aa2.64□□□□□ -1.99
VPS8-226ENST00000495190 COL6A3P12111 3177 aa2.64□□□□□ -1.99
VPS8-226ENST00000495190 DEFB131BA0A096LNP1 70 aa2.63□□□□□ -1.99
VPS8-226ENST00000495190 A8MWP4 228 aa2.63□□□□□ -1.99
VPS8-226ENST00000495190 WFDC13Q8IUB5 93 aa2.63□□□□□ -1.99
VPS8-226ENST00000495190 Q8NAQ8 132 aa2.63□□□□□ -1.99
VPS8-226ENST00000495190 DSPP15924 2871 aaKnown RBP2.63□□□□□ -1.99
VPS8-226ENST00000495190 SPTA1P02549 2419 aa2.63□□□□□ -1.99
VPS8-226ENST00000495190 CFAP54Q96N23 3096 aa2.63□□□□□ -1.99
VPS8-226ENST00000495190 CSPG4Q6UVK1 2322 aa2.62□□□□□ -1.99
VPS8-226ENST00000495190 A0A096LPF7 62 aa2.62□□□□□ -1.99
VPS8-226ENST00000495190 SPART-AS1P0CW21 52 aa2.62□□□□□ -1.99
VPS8-226ENST00000495190 WFDC10BQ8IUB3 73 aa2.62□□□□□ -1.99
VPS8-226ENST00000495190 R4GN34 69 aa2.62□□□□□ -1.99
VPS8-226ENST00000495190 LAMA3Q16787 3333 aa2.62□□□□□ -1.99
VPS8-226ENST00000495190 FRYLO94915 3013 aa2.61□□□□□ -1.99
VPS8-226ENST00000495190 LINC00313P59037 77 aa2.61□□□□□ -1.99
VPS8-226ENST00000495190 KRTAP6-3Q3LI67 103 aa2.61□□□□□ -1.99
VPS8-226ENST00000495190 SPRR1BP22528 89 aa2.6□□□□□ -1.99
VPS8-226ENST00000495190 SPINK7P58062 85 aa2.6□□□□□ -1.99
VPS8-226ENST00000495190 SPAG11AQ6PDA7 123 aa2.6□□□□□ -1.99
VPS8-226ENST00000495190 LINC00472Q9H8W2 130 aa2.6□□□□□ -1.99
VPS8-226ENST00000495190 PRRC2CQ9Y520 2896 aaKnown RBP2.6□□□□□ -1.99
VPS8-226ENST00000495190 VPS13AQ96RL7 3174 aa2.59□□□□□ -1.99
VPS8-226ENST00000495190 A0A087WSZ3 146 aa2.59□□□□□ -1.99
VPS8-226ENST00000495190 SPATA8Q6RVD6 105 aa2.59□□□□□ -1.99
VPS8-226ENST00000495190 RETNLBQ9BQ08 111 aa2.59□□□□□ -1.99
VPS8-226ENST00000495190 PIEZO2Q9H5I5 2752 aa2.58□□□□□ -2
VPS8-226ENST00000495190 VCANP13611 3396 aa2.58□□□□□ -2
VPS8-226ENST00000495190 KALRNO60229 2985 aa2.58□□□□□ -2
VPS8-226ENST00000495190 ACYP2P14621 99 aa2.58□□□□□ -2
VPS8-226ENST00000495190 LINC01556Q5JQF7 62 aa2.58□□□□□ -2
VPS8-226ENST00000495190 TLN1Q9Y490 2541 aaKnown RBP2.58□□□□□ -2
VPS8-226ENST00000495190 MMP24-AS1A0A0U1RRL7 71 aa2.57□□□□□ -2
VPS8-226ENST00000495190 CDH23Q9H251 3354 aa2.57□□□□□ -2
VPS8-226ENST00000495190 GVINP1Q7Z2Y8 2422 aa2.57□□□□□ -2
VPS8-226ENST00000495190 FREM2Q5SZK8 3169 aa2.56□□□□□ -2
VPS8-226ENST00000495190 RPL37AP61513 92 aaKnown RBP2.56□□□□□ -2
VPS8-226ENST00000495190 HIVEP3Q5T1R4 2406 aa2.56□□□□□ -2
VPS8-226ENST00000495190 SPEGQ15772 3267 aa2.55□□□□□ -2
VPS8-226ENST00000495190 PCOTHQ58A44 107 aa2.55□□□□□ -2
VPS8-226ENST00000495190 CFAP47Q6ZTR5 3102 aa2.55□□□□□ -2
VPS8-226ENST00000495190 PRUNE2Q8WUY3 3088 aa2.55□□□□□ -2
VPS8-226ENST00000495190 USP34Q70CQ2 3546 aa2.55□□□□□ -2
VPS8-226ENST00000495190 SPG11Q96JI7 2443 aa2.54□□□□□ -2
VPS8-226ENST00000495190 UQCR11O14957 56 aa2.54□□□□□ -2
VPS8-226ENST00000495190 HTN3P15516 51 aa2.54□□□□□ -2
VPS8-226ENST00000495190 DEFB135Q30KP9 77 aa2.54□□□□□ -2
VPS8-226ENST00000495190 DEFB113Q30KQ7 82 aa2.54□□□□□ -2
VPS8-226ENST00000495190 ANKRD11Q6UB99 2663 aaPredicted RBP2.54□□□□□ -2
VPS8-226ENST00000495190 DEFB4AO15263 64 aa2.53□□□□□ -2
VPS8-226ENST00000495190 MIR22HGQ0VDD5 57 aa2.53□□□□□ -2
VPS8-226ENST00000495190 MRPL34Q9BQ48 92 aaKnown RBP2.53□□□□□ -2
VPS8-226ENST00000495190 NBASA2RRP1 2371 aa2.53□□□□□ -2
VPS8-226ENST00000495190 MGAQ8IWI9 3026 aa2.52□□□□□ -2.01
VPS8-226ENST00000495190 A0A1B0GU69 56 aa2.52□□□□□ -2.01
VPS8-226ENST00000495190 KRTAP25-1Q3LHN0 102 aa2.52□□□□□ -2.01
VPS8-226ENST00000495190 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
VPS8-226ENST00000495190 TACC2O95359 2948 aa2.52□□□□□ -2.01
VPS8-226ENST00000495190 CELSR3Q9NYQ7 3312 aa2.51□□□□□ -2.01
VPS8-226ENST00000495190 DMAC1Q96GE9 116 aa2.51□□□□□ -2.01
VPS8-226ENST00000495190 WDFY4Q6ZS81 3184 aa2.51□□□□□ -2.01
VPS8-226ENST00000495190 RIF1Q5UIP0 2472 aaKnown RBP2.5□□□□□ -2.01
VPS8-226ENST00000495190 A0A0G2JQZ4 141 aa2.5□□□□□ -2.01
VPS8-226ENST00000495190 KRTAP12-3P60328 96 aa2.5□□□□□ -2.01
VPS8-226ENST00000495190 Q96NJ1 140 aa2.5□□□□□ -2.01
VPS8-226ENST00000495190 ZNF706Q9Y5V0 76 aaPredicted RBP2.5□□□□□ -2.01
VPS8-226ENST00000495190 DMXL2Q8TDJ6 3036 aa2.5□□□□□ -2.01
VPS8-226ENST00000495190 SPTBN5Q9NRC6 3674 aaKnown RBP2.49□□□□□ -2.01
VPS8-226ENST00000495190 WDFY3Q8IZQ1 3526 aa2.49□□□□□ -2.01
VPS8-226ENST00000495190 CSAG1Q6PB30 78 aa2.49□□□□□ -2.01
VPS8-226ENST00000495190 TLN2Q9Y4G6 2542 aa2.49□□□□□ -2.01
VPS8-226ENST00000495190 HRNRQ86YZ3 2850 aaPredicted RBP2.49□□□□□ -2.01
VPS8-226ENST00000495190 FN1P02751 2386 aaKnown RBP2.49□□□□□ -2.01
VPS8-226ENST00000495190 ADGRG4Q8IZF6 3080 aa2.48□□□□□ -2.01
VPS8-226ENST00000495190 AKAP13Q12802 2813 aa2.48□□□□□ -2.01
VPS8-226ENST00000495190 PRLHP81277 87 aa2.48□□□□□ -2.01
VPS8-226ENST00000495190 C1orf134Q5TEV5 83 aa2.46□□□□□ -2.02
VPS8-226ENST00000495190 MYO9AB2RTY4 2548 aa2.46□□□□□ -2.02
VPS8-226ENST00000495190 CEP295Q9C0D2 2601 aa2.46□□□□□ -2.02
VPS8-226ENST00000495190 DCHS2Q6V1P9 2916 aa2.45□□□□□ -2.02
VPS8-226ENST00000495190 USP9XQ93008 2570 aaPredicted RBP2.45□□□□□ -2.02
VPS8-226ENST00000495190 ZFHX3Q15911 3703 aa2.45□□□□□ -2.02
VPS8-226ENST00000495190 A0A096LNI7 61 aa2.45□□□□□ -2.02
VPS8-226ENST00000495190 ROMO1P60602 79 aa2.45□□□□□ -2.02
VPS8-226ENST00000495190 USP9YO00507 2555 aaPredicted RBP2.45□□□□□ -2.02
VPS8-226ENST00000495190 JMJD1CQ15652 2540 aa2.44□□□□□ -2.02
VPS8-226ENST00000495190 NCOR2Q9Y618 2525 aa2.44□□□□□ -2.02
VPS8-226ENST00000495190 LRBAP50851 2863 aa2.44□□□□□ -2.02
VPS8-226ENST00000495190 BDP1A6H8Y1 2624 aa2.44□□□□□ -2.02
VPS8-226ENST00000495190 PTPN13Q12923 2485 aa2.44□□□□□ -2.02
VPS8-226ENST00000495190 DOPEY1Q5JWR5 2465 aa2.44□□□□□ -2.02
VPS8-226ENST00000495190 DCHS1Q96JQ0 3298 aa2.44□□□□□ -2.02
VPS8-226ENST00000495190 KRTAP12-4P60329 112 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms