RNA–Protein interactions for RNA: ENST00000492650.1

VPS36-205, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 5

Gene VPS36, Length 540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-205ENST00000492650 SPTA1P02549 2419 aa0.74□□□□□ -2.29
VPS36-205ENST00000492650 LINC01546A6NGU7 62 aa0.74□□□□□ -2.29
VPS36-205ENST00000492650 KRTAP19-3Q7Z4W3 81 aa0.74□□□□□ -2.29
VPS36-205ENST00000492650 CELSR2Q9HCU4 2923 aa0.74□□□□□ -2.29
VPS36-205ENST00000492650 PDE4DIPQ5VU43 2346 aa0.73□□□□□ -2.29
VPS36-205ENST00000492650 TENM3Q9P273 2699 aa0.73□□□□□ -2.29
VPS36-205ENST00000492650 LINC00308Q8TCZ7 52 aa0.73□□□□□ -2.29
VPS36-205ENST00000492650 C6orf48Q9UBA6 75 aa0.73□□□□□ -2.29
VPS36-205ENST00000492650 IQGAP2Q13576 1575 aa0.73□□□□□ -2.29
VPS36-205ENST00000492650 RPS27P42677 84 aaKnown RBP0.72□□□□□ -2.29
VPS36-205ENST00000492650 RPS27LQ71UM5 84 aaKnown RBP0.72□□□□□ -2.29
VPS36-205ENST00000492650 SMR3AQ99954 134 aa0.72□□□□□ -2.29
VPS36-205ENST00000492650 FRAS1Q86XX4 4008 aa0.72□□□□□ -2.29
VPS36-205ENST00000492650 CHD6Q8TD26 2715 aa0.72□□□□□ -2.29
VPS36-205ENST00000492650 TOP2AP11388 1531 aaKnown RBP0.71□□□□□ -2.3
VPS36-205ENST00000492650 KRTAP2-3P0C7H8 128 aa0.71□□□□□ -2.3
VPS36-205ENST00000492650 KRTAP2-4Q9BYR9 128 aa0.71□□□□□ -2.3
VPS36-205ENST00000492650 KRTAP2-1Q9BYU5 128 aa0.71□□□□□ -2.3
VPS36-205ENST00000492650 ATRQ13535 2644 aa0.71□□□□□ -2.3
VPS36-205ENST00000492650 ALMS1Q8TCU4 4167 aa0.71□□□□□ -2.3
VPS36-205ENST00000492650 TOGARAM1Q9Y4F4 1720 aa0.7□□□□□ -2.3
VPS36-205ENST00000492650 ZNF469Q96JG9 3925 aaPredicted RBP0.69□□□□□ -2.3
VPS36-205ENST00000492650 SPINK1P00995 79 aa0.68□□□□□ -2.3
VPS36-205ENST00000492650 CDC42BPAQ5VT25 1732 aa0.68□□□□□ -2.3
VPS36-205ENST00000492650 CHD8Q9HCK8 2581 aa0.68□□□□□ -2.3
VPS36-205ENST00000492650 TENM4Q6N022 2769 aa0.68□□□□□ -2.3
VPS36-205ENST00000492650 CSPG4Q6UVK1 2322 aa0.67□□□□□ -2.3
VPS36-205ENST00000492650 APCP25054 2843 aa0.67□□□□□ -2.3
VPS36-205ENST00000492650 WT1-ASQ06250 92 aa0.67□□□□□ -2.3
VPS36-205ENST00000492650 TIMM8BQ9Y5J9 83 aaPredicted RBP0.67□□□□□ -2.3
VPS36-205ENST00000492650 DSPP15924 2871 aaKnown RBP0.67□□□□□ -2.3
VPS36-205ENST00000492650 TRANK1O15050 2925 aa0.66□□□□□ -2.3
VPS36-205ENST00000492650 FAM208AQ9UK61 1670 aaKnown RBP0.66□□□□□ -2.3
VPS36-205ENST00000492650 ZFYVE26Q68DK2 2539 aa0.66□□□□□ -2.3
VPS36-205ENST00000492650 LMO7Q8WWI1 1683 aa0.65□□□□□ -2.3
VPS36-205ENST00000492650 VWFP04275 2813 aa0.65□□□□□ -2.3
VPS36-205ENST00000492650 NOTCH1P46531 2555 aa0.65□□□□□ -2.3
VPS36-205ENST00000492650 HECTD1Q9ULT8 2610 aa0.65□□□□□ -2.31
VPS36-205ENST00000492650 IGF2RP11717 2491 aa0.65□□□□□ -2.31
VPS36-205ENST00000492650 PCNX1Q96RV3 2341 aa0.65□□□□□ -2.31
VPS36-205ENST00000492650 NCOR1O75376 2440 aa0.65□□□□□ -2.31
VPS36-205ENST00000492650 FBN2P35556 2912 aa0.65□□□□□ -2.31
VPS36-205ENST00000492650 PTPN13Q12923 2485 aa0.64□□□□□ -2.31
VPS36-205ENST00000492650 S4R3F8 94 aa0.64□□□□□ -2.31
VPS36-205ENST00000492650 U3KQA8 63 aa0.64□□□□□ -2.31
VPS36-205ENST00000492650 IQGAP1P46940 1657 aa0.64□□□□□ -2.31
VPS36-205ENST00000492650 EP300Q09472 2414 aaPredicted RBP0.63□□□□□ -2.31
VPS36-205ENST00000492650 TFF3Q07654 80 aa0.63□□□□□ -2.31
VPS36-205ENST00000492650 BSNQ9UPA5 3926 aa0.62□□□□□ -2.31
VPS36-205ENST00000492650 H3BUA1 57 aa0.62□□□□□ -2.31
VPS36-205ENST00000492650 UNC79Q9P2D8 2635 aa0.61□□□□□ -2.31
VPS36-205ENST00000492650 ATP7AQ04656 1500 aa0.61□□□□□ -2.31
VPS36-205ENST00000492650 M0R2T5 61 aa0.61□□□□□ -2.31
VPS36-205ENST00000492650 DEFB135Q30KP9 77 aa0.61□□□□□ -2.31
VPS36-205ENST00000492650 DEFB106AQ8N104 65 aa0.61□□□□□ -2.31
VPS36-205ENST00000492650 SMIM2Q9BVW6 85 aa0.61□□□□□ -2.31
VPS36-205ENST00000492650 MAP1BP46821 2468 aaKnown RBP0.61□□□□□ -2.31
VPS36-205ENST00000492650 DDX60Q8IY21 1712 aaKnown RBP0.61□□□□□ -2.31
VPS36-205ENST00000492650 NFAT5O94916 1531 aa0.6□□□□□ -2.31
VPS36-205ENST00000492650 PRLHP81277 87 aa0.6□□□□□ -2.31
VPS36-205ENST00000492650 CREBBPQ92793 2442 aa0.6□□□□□ -2.31
VPS36-205ENST00000492650 KIF21BO75037 1637 aa0.6□□□□□ -2.31
VPS36-205ENST00000492650 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
VPS36-205ENST00000492650 TNXBP22105 4242 aa0.59□□□□□ -2.31
VPS36-205ENST00000492650 CEP290O15078 2479 aa0.59□□□□□ -2.32
VPS36-205ENST00000492650 PKD1L2Q7Z442 2459 aa0.59□□□□□ -2.32
VPS36-205ENST00000492650 H0YGG7 62 aa0.58□□□□□ -2.32
VPS36-205ENST00000492650 AKAP13Q12802 2813 aa0.58□□□□□ -2.32
VPS36-205ENST00000492650 PRKDCP78527 4128 aaKnown RBP0.57□□□□□ -2.32
VPS36-205ENST00000492650 WFDC10BQ8IUB3 73 aa0.57□□□□□ -2.32
VPS36-205ENST00000492650 KAAG1Q9UBP8 84 aa0.57□□□□□ -2.32
VPS36-205ENST00000492650 OTOGQ6ZRI0 2925 aa0.57□□□□□ -2.32
VPS36-205ENST00000492650 SAMD9LQ8IVG5 1584 aa0.57□□□□□ -2.32
VPS36-205ENST00000492650 PRM1P04553 51 aa0.56□□□□□ -2.32
VPS36-205ENST00000492650 PRRC2CQ9Y520 2896 aaKnown RBP0.56□□□□□ -2.32
VPS36-205ENST00000492650 HUWE1Q7Z6Z7 4374 aaKnown RBP0.55□□□□□ -2.32
VPS36-205ENST00000492650 TRPM2O94759 1503 aa0.55□□□□□ -2.32
VPS36-205ENST00000492650 NDUFA1O15239 70 aa0.55□□□□□ -2.32
VPS36-205ENST00000492650 NBASA2RRP1 2371 aa0.54□□□□□ -2.32
VPS36-205ENST00000492650 WNK1Q9H4A3 2382 aa0.54□□□□□ -2.32
VPS36-205ENST00000492650 HIVEP3Q5T1R4 2406 aa0.54□□□□□ -2.32
VPS36-205ENST00000492650 NOP10Q9NPE3 64 aaKnown RBP0.53□□□□□ -2.32
VPS36-205ENST00000492650 NAV2Q8IVL1 2488 aa0.52□□□□□ -2.33
VPS36-205ENST00000492650 IGLV5-48A0A075B6I7 105 aa0.52□□□□□ -2.33
VPS36-205ENST00000492650 KRTAP21-1Q3LI58 79 aa0.52□□□□□ -2.33
VPS36-205ENST00000492650 USP24Q9UPU5 2620 aa0.52□□□□□ -2.33
VPS36-205ENST00000492650 UBR5O95071 2799 aaPredicted RBP0.52□□□□□ -2.33
VPS36-205ENST00000492650 APC2O95996 2303 aa0.52□□□□□ -2.33
VPS36-205ENST00000492650 PKD1L1Q8TDX9 2849 aa0.51□□□□□ -2.33
VPS36-205ENST00000492650 SYNE1Q8NF91 8797 aaKnown RBP0.51□□□□□ -2.33
VPS36-205ENST00000492650 SETXQ7Z333 2677 aaKnown RBP0.51□□□□□ -2.33
VPS36-205ENST00000492650 NCOR2Q9Y618 2525 aa0.5□□□□□ -2.33
VPS36-205ENST00000492650 ACANP16112 2415 aa0.5□□□□□ -2.33
VPS36-205ENST00000492650 MMP24-AS1A0A0U1RRL7 71 aa0.5□□□□□ -2.33
VPS36-205ENST00000492650 DEFB131AP59861 70 aa0.5□□□□□ -2.33
VPS36-205ENST00000492650 GPR98Q8WXG9 6306 aa0.5□□□□□ -2.33
VPS36-205ENST00000492650 LRP1Q07954 4544 aaKnown RBP0.5□□□□□ -2.33
VPS36-205ENST00000492650 TNRC18O15417 2968 aaPredicted RBP0.49□□□□□ -2.33
VPS36-205ENST00000492650 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
VPS36-205ENST00000492650 CACNA1AO00555 2505 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms