RNA–Protein interactions for RNA: ENST00000484275.1

SCAF11-207, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-207ENST00000484275 LTN1O94822 1766 aa-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 KNL1Q8NG31 2342 aa-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 VPS13AQ96RL7 3174 aa-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 EPRSP07814 1512 aaKnown RBP-0.43□□□□□ -2.48
SCAF11-207ENST00000484275 POLR1AO95602 1720 aaPredicted RBP-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 CEP250Q9BV73 2442 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 CLIP1P30622 1438 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 H7BZZ5 65 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 ARMS2P0C7Q2 107 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 ASIPP42127 132 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 FANCAO15360 1455 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 CENPFP49454 3210 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 RGPD1P0DJD0 1748 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 ACACAQ13085 2346 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 CFAP47Q6ZTR5 3102 aa-0.44□□□□□ -2.48
SCAF11-207ENST00000484275 ANKRD36BQ8N2N9 1353 aa-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 CICQ96RK0 1608 aaPredicted RBP-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 NRXN1Q9ULB1 1477 aa-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 SPTY2D1-AS1A0A0U1RR47 76 aa-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 ATOX1O00244 68 aa-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 GNGT2O14610 69 aa-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 DEFB112Q30KQ8 113 aa-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 TRGV9Q99603 122 aa-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 DNAH12Q6ZR08 3092 aa-0.45□□□□□ -2.48
SCAF11-207ENST00000484275 GOLGB1Q14789 3259 aaKnown RBP-0.46□□□□□ -2.48
SCAF11-207ENST00000484275 TEX14Q8IWB6 1497 aa-0.46□□□□□ -2.48
SCAF11-207ENST00000484275 TRBV7-7A0A0K0K1E9 115 aa-0.46□□□□□ -2.48
SCAF11-207ENST00000484275 PMCHL2Q9BQD1 86 aa-0.46□□□□□ -2.48
SCAF11-207ENST00000484275 NESP48681 1621 aa-0.46□□□□□ -2.48
SCAF11-207ENST00000484275 MT1BP07438 61 aa-0.47□□□□□ -2.48
SCAF11-207ENST00000484275 HMGN3Q15651 99 aa-0.47□□□□□ -2.48
SCAF11-207ENST00000484275 LELP1Q5T871 98 aa-0.47□□□□□ -2.48
SCAF11-207ENST00000484275 HEPN1Q6WQI6 88 aa-0.47□□□□□ -2.48
SCAF11-207ENST00000484275 SERP2Q8N6R1 65 aa-0.47□□□□□ -2.48
SCAF11-207ENST00000484275 HIGD1BQ9P298 99 aa-0.47□□□□□ -2.48
SCAF11-207ENST00000484275 CDKN2A-AS1Q9UH64 79 aa-0.47□□□□□ -2.48
SCAF11-207ENST00000484275 AP4S1Q9Y587 144 aa-0.47□□□□□ -2.48
SCAF11-207ENST00000484275 CNTLNQ9NXG0 1405 aa-0.47□□□□□ -2.49
SCAF11-207ENST00000484275 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 TMEM218A2RU14 115 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 S100PP25815 95 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 ETDBQ3ZM63 59 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 ALKAL2Q6UX46 152 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 ZNF720Q7Z2F6 126 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 TCEAL7Q9BRU2 100 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 PSENENQ9NZ42 101 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 LRRC9Q6ZRR7 1453 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 MAGI2Q86UL8 1455 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 LRRC7Q96NW7 1537 aa-0.48□□□□□ -2.49
SCAF11-207ENST00000484275 UQCRHLA0A096LP55 91 aa-0.49□□□□□ -2.49
SCAF11-207ENST00000484275 H0YGG7 62 aa-0.49□□□□□ -2.49
SCAF11-207ENST00000484275 MT-ATP8P03928 68 aa-0.49□□□□□ -2.49
SCAF11-207ENST00000484275 WFDC13Q8IUB5 93 aa-0.49□□□□□ -2.49
SCAF11-207ENST00000484275 SPRR2FQ96RM1 72 aa-0.49□□□□□ -2.49
SCAF11-207ENST00000484275 ATP10BO94823 1461 aa-0.49□□□□□ -2.49
SCAF11-207ENST00000484275 PPLO60437 1756 aa-0.5□□□□□ -2.49
SCAF11-207ENST00000484275 LINC00032P0C843 101 aa-0.5□□□□□ -2.49
SCAF11-207ENST00000484275 S100A10P60903 97 aa-0.5□□□□□ -2.49
SCAF11-207ENST00000484275 NMSQ5H8A3 153 aa-0.5□□□□□ -2.49
SCAF11-207ENST00000484275 TMEM131LA2VDJ0 1609 aa-0.5□□□□□ -2.49
SCAF11-207ENST00000484275 SCN11AQ9UI33 1791 aa-0.5□□□□□ -2.49
SCAF11-207ENST00000484275 D6R8Y8 96 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 F8WEM9 126 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 LEPROTL1O95214 131 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 MT1AP04731 61 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 IGLC2P0DOY2 106 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 IGLC3P0DOY3 106 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 NWD1Q149M9 1564 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 KRTAP19-2Q3LHN2 52 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 MUSTN1Q8IVN3 82 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 MT1MQ8N339 61 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 C14orf144Q96I85 54 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 UBE2D4Q9Y2X8 147 aa-0.51□□□□□ -2.49
SCAF11-207ENST00000484275 DOT1LQ8TEK3 1739 aa-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 PLXNC1O60486 1568 aa-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 ATP7BP35670 1465 aa-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 RPL38P63173 70 aaKnown RBP-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 COL5A1-AS1Q5SY13 56 aa-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 COX6B2Q6YFQ2 88 aa-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 ACBD7Q8N6N7 88 aa-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 DPY30Q9C005 99 aa-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 DDX60LQ5H9U9 1706 aaKnown RBP-0.52□□□□□ -2.49
SCAF11-207ENST00000484275 USP32Q8NFA0 1604 aa-0.53□□□□□ -2.49
SCAF11-207ENST00000484275 MAP3K4Q9Y6R4 1608 aa-0.53□□□□□ -2.49
SCAF11-207ENST00000484275 MT1HL1P0DM35 61 aa-0.53□□□□□ -2.49
SCAF11-207ENST00000484275 COX7BP24311 80 aa-0.53□□□□□ -2.49
SCAF11-207ENST00000484275 RBP2P50120 134 aa-0.53□□□□□ -2.49
SCAF11-207ENST00000484275 MT1XP80297 61 aa-0.53□□□□□ -2.49
SCAF11-207ENST00000484275 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.53□□□□□ -2.49
SCAF11-207ENST00000484275 TROQ12816 1431 aaPredicted RBP-0.54□□□□□ -2.5
SCAF11-207ENST00000484275 CEP162Q5TB80 1403 aa-0.54□□□□□ -2.5
SCAF11-207ENST00000484275 VPS8Q8N3P4 1428 aa-0.54□□□□□ -2.5
SCAF11-207ENST00000484275 MT2AP02795 61 aa-0.54□□□□□ -2.5
SCAF11-207ENST00000484275 MT1EP04732 61 aa-0.54□□□□□ -2.5
SCAF11-207ENST00000484275 MT1GP13640 62 aa-0.54□□□□□ -2.5
SCAF11-207ENST00000484275 FAUP35544 74 aaKnown RBP-0.54□□□□□ -2.5
SCAF11-207ENST00000484275 ARFGEF2Q9Y6D5 1785 aa-0.55□□□□□ -2.5
SCAF11-207ENST00000484275 ATP6V1G2-DDX39BF2Z307 99 aa-0.55□□□□□ -2.5
SCAF11-207ENST00000484275 MT1FP04733 61 aa-0.55□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms