RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 Q1RN00 199 aa8.46□□□□□ -1.06
TMEM39A-205ENST00000468676 RETNLBQ9BQ08 111 aa8.46□□□□□ -1.06
TMEM39A-205ENST00000468676 UBR4Q5T4S7 5183 aa8.46□□□□□ -1.06
TMEM39A-205ENST00000468676 H0YGX0 51 aa8.45□□□□□ -1.06
TMEM39A-205ENST00000468676 FXYD2P54710 66 aa8.45□□□□□ -1.06
TMEM39A-205ENST00000468676 Q8N377 158 aa8.45□□□□□ -1.06
TMEM39A-205ENST00000468676 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-205ENST00000468676 FP248Q71RG6 208 aaPredicted RBP8.44□□□□□ -1.06
TMEM39A-205ENST00000468676 SMIM29Q86T20 159 aa8.44□□□□□ -1.06
TMEM39A-205ENST00000468676 PRO1933Q9H354 126 aa8.44□□□□□ -1.06
TMEM39A-205ENST00000468676 IGLV7-46A0A075B6I9 117 aa8.43□□□□□ -1.06
TMEM39A-205ENST00000468676 Q6ZQY7 126 aa8.43□□□□□ -1.06
TMEM39A-205ENST00000468676 CD164Q04900 197 aa8.42□□□□□ -1.06
TMEM39A-205ENST00000468676 PPDPFLQ8WWR9 84 aa8.42□□□□□ -1.06
TMEM39A-205ENST00000468676 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.41□□□□□ -1.06
TMEM39A-205ENST00000468676 F8WEM9 126 aa8.41□□□□□ -1.06
TMEM39A-205ENST00000468676 SMIM6P0DI80 62 aa8.4□□□□□ -1.06
TMEM39A-205ENST00000468676 TPRXLQ17RH7 258 aa8.39□□□□□ -1.07
TMEM39A-205ENST00000468676 OCIAD2Q56VL3 154 aa8.39□□□□□ -1.07
TMEM39A-205ENST00000468676 LIMD2Q9BT23 127 aa8.39□□□□□ -1.07
TMEM39A-205ENST00000468676 LPAP08519 4548 aa8.38□□□□□ -1.07
TMEM39A-205ENST00000468676 A0A1B0GX51 115 aa8.38□□□□□ -1.07
TMEM39A-205ENST00000468676 GHRHP01286 108 aa8.37□□□□□ -1.07
TMEM39A-205ENST00000468676 KRTAP9-2Q9BYQ4 174 aa8.37□□□□□ -1.07
TMEM39A-205ENST00000468676 HRCT1Q6UXD1 115 aa8.36□□□□□ -1.07
TMEM39A-205ENST00000468676 SNHG12Q9BXW3 62 aa8.36□□□□□ -1.07
TMEM39A-205ENST00000468676 TRIAP1O43715 76 aa8.35□□□□□ -1.07
TMEM39A-205ENST00000468676 COX6CP09669 75 aa8.35□□□□□ -1.07
TMEM39A-205ENST00000468676 Q6JHZ5 121 aa8.35□□□□□ -1.07
TMEM39A-205ENST00000468676 IGLV8-61A0A075B6I0 122 aa8.34□□□□□ -1.07
TMEM39A-205ENST00000468676 KRTAP9-6A0A140TA67 174 aa8.34□□□□□ -1.07
TMEM39A-205ENST00000468676 K7ERJ3 54 aa8.34□□□□□ -1.07
TMEM39A-205ENST00000468676 PSMB2P49721 201 aa8.34□□□□□ -1.07
TMEM39A-205ENST00000468676 FAM218AQ96MZ4 157 aa8.34□□□□□ -1.07
TMEM39A-205ENST00000468676 CDIP1Q9H305 208 aa8.34□□□□□ -1.07
TMEM39A-205ENST00000468676 Q5XG85 94 aa8.33□□□□□ -1.08
TMEM39A-205ENST00000468676 M0R143 59 aa8.31□□□□□ -1.08
TMEM39A-205ENST00000468676 H3BQ85 93 aa8.3□□□□□ -1.08
TMEM39A-205ENST00000468676 CLEC2BQ92478 149 aa8.3□□□□□ -1.08
TMEM39A-205ENST00000468676 DNAL4O96015 105 aa8.29□□□□□ -1.08
TMEM39A-205ENST00000468676 KRTAP13-3Q3SY46 172 aa8.29□□□□□ -1.08
TMEM39A-205ENST00000468676 A0A0G2JQZ4 141 aa8.28□□□□□ -1.08
TMEM39A-205ENST00000468676 LOC105371267A0A1B0GV96 52 aa8.28□□□□□ -1.08
TMEM39A-205ENST00000468676 TSTD3H0UI37 97 aa8.28□□□□□ -1.08
TMEM39A-205ENST00000468676 TCL1BO95988 128 aa8.28□□□□□ -1.08
TMEM39A-205ENST00000468676 NDUFV3P56181 108 aaKnown RBP8.27□□□□□ -1.09
TMEM39A-205ENST00000468676 IGFL1Q6UW32 110 aa8.27□□□□□ -1.09
TMEM39A-205ENST00000468676 RNF213Q63HN8 5207 aa8.27□□□□□ -1.09
TMEM39A-205ENST00000468676 SCGB1C2P0DMR2 95 aa8.25□□□□□ -1.09
TMEM39A-205ENST00000468676 FABP2P12104 132 aa8.25□□□□□ -1.09
TMEM39A-205ENST00000468676 ORMDL1Q9P0S3 153 aa8.24□□□□□ -1.09
TMEM39A-205ENST00000468676 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
TMEM39A-205ENST00000468676 H3BUT2 72 aa8.23□□□□□ -1.09
TMEM39A-205ENST00000468676 H3BMG7 143 aa8.22□□□□□ -1.09
TMEM39A-205ENST00000468676 TMEM256-PLSCR3K7ERE1 68 aa8.22□□□□□ -1.09
TMEM39A-205ENST00000468676 TRACP01848 142 aa8.22□□□□□ -1.09
TMEM39A-205ENST00000468676 C1orf195Q5TG92 126 aa8.22□□□□□ -1.09
TMEM39A-205ENST00000468676 ASB16-AS1Q495Z4 193 aa8.21□□□□□ -1.1
TMEM39A-205ENST00000468676 LST1O00453 97 aa8.2□□□□□ -1.1
TMEM39A-205ENST00000468676 Q6Q795 121 aa8.2□□□□□ -1.1
TMEM39A-205ENST00000468676 TEN1Q86WV5 123 aa8.19□□□□□ -1.1
TMEM39A-205ENST00000468676 UBE2V1Q13404 147 aa8.17□□□□□ -1.1
TMEM39A-205ENST00000468676 SS18L2Q9UHA2 77 aa8.16□□□□□ -1.1
TMEM39A-205ENST00000468676 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
TMEM39A-205ENST00000468676 LYRM7Q5U5X0 104 aa8.14□□□□□ -1.11
TMEM39A-205ENST00000468676 ANKRD29Q8N6D5 301 aa8.14□□□□□ -1.11
TMEM39A-205ENST00000468676 ATXN8Q156A1 80 aa8.13□□□□□ -1.11
TMEM39A-205ENST00000468676 BATFQ16520 125 aa8.12□□□□□ -1.11
TMEM39A-205ENST00000468676 C9orf92A6NGG3 77 aa8.11□□□□□ -1.11
TMEM39A-205ENST00000468676 A0A0U1RQV1 116 aa8.1□□□□□ -1.11
TMEM39A-205ENST00000468676 BAALC-AS2P0C853 105 aa8.1□□□□□ -1.11
TMEM39A-205ENST00000468676 NAA38Q9BRA0 125 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-205ENST00000468676 A0A087WSZ3 146 aa8.09□□□□□ -1.11
TMEM39A-205ENST00000468676 TRBV7-4A0A0J9YYF1 115 aa8.09□□□□□ -1.11
TMEM39A-205ENST00000468676 MUC2Q02817 5179 aa8.08□□□□□ -1.12
TMEM39A-205ENST00000468676 TRBV20-1A0A075B6N2 111 aa8.08□□□□□ -1.12
TMEM39A-205ENST00000468676 A0A1W2PNM2 257 aa8.08□□□□□ -1.12
TMEM39A-205ENST00000468676 RBM3P98179 157 aaKnown RBP8.08□□□□□ -1.12
TMEM39A-205ENST00000468676 A0A1B0GV72 72 aa8.07□□□□□ -1.12
TMEM39A-205ENST00000468676 DSCR8Q96T75 97 aa8.06□□□□□ -1.12
TMEM39A-205ENST00000468676 MUC17Q685J3 4493 aa8.05□□□□□ -1.12
TMEM39A-205ENST00000468676 CCKP06307 115 aa8.05□□□□□ -1.12
TMEM39A-205ENST00000468676 C9orf118A6NHY6 69 aa8.04□□□□□ -1.12
TMEM39A-205ENST00000468676 C9JAW5 83 aa8.02□□□□□ -1.13
TMEM39A-205ENST00000468676 JMJD7-PLA2G4BH0Y9G9 81 aa8.02□□□□□ -1.13
TMEM39A-205ENST00000468676 C21orf62-AS1Q17RA5 79 aa8.02□□□□□ -1.13
TMEM39A-205ENST00000468676 TAX1BP3O14907 124 aa8.01□□□□□ -1.13
TMEM39A-205ENST00000468676 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
TMEM39A-205ENST00000468676 A0A1W2PPM0 123 aa7.99□□□□□ -1.13
TMEM39A-205ENST00000468676 Q96NJ1 140 aa7.99□□□□□ -1.13
TMEM39A-205ENST00000468676 VPS25Q9BRG1 176 aa7.99□□□□□ -1.13
TMEM39A-205ENST00000468676 PDE6GP18545 87 aa7.98□□□□□ -1.13
TMEM39A-205ENST00000468676 RPL37P61927 97 aaKnown RBP7.98□□□□□ -1.13
TMEM39A-205ENST00000468676 KRTAP4-12Q9BQ66 201 aa7.98□□□□□ -1.13
TMEM39A-205ENST00000468676 PCOTHQ58A44 107 aa7.97□□□□□ -1.13
TMEM39A-205ENST00000468676 OBSCN-AS1Q96MR7 158 aa7.97□□□□□ -1.13
TMEM39A-205ENST00000468676 KRTAP9-9Q9BYP9 154 aa7.96□□□□□ -1.14
TMEM39A-205ENST00000468676 KRTAP9-4Q9BYQ2 154 aa7.96□□□□□ -1.14
TMEM39A-205ENST00000468676 LOC110117498A0A087WWA1 95 aa7.95□□□□□ -1.14
TMEM39A-205ENST00000468676 A0A1B0GW54 56 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms