RNA–Protein interactions for RNA: ENST00000446356.1

ATP13A3-204, Transcript of ATPase 13A3, humanhuman

TSL 4

Gene ATP13A3, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A3-204ENST00000446356 ZFYVE26Q68DK2 2539 aa0.72□□□□□ -2.29
ATP13A3-204ENST00000446356 C4AP0C0L4 1744 aa0.72□□□□□ -2.29
ATP13A3-204ENST00000446356 C4BP0C0L5 1744 aa0.72□□□□□ -2.29
ATP13A3-204ENST00000446356 KIF1AQ12756 1690 aa0.72□□□□□ -2.29
ATP13A3-204ENST00000446356 TRANK1O15050 2925 aa0.71□□□□□ -2.29
ATP13A3-204ENST00000446356 SPTA1P02549 2419 aa0.71□□□□□ -2.3
ATP13A3-204ENST00000446356 BPTFQ12830 3046 aa0.71□□□□□ -2.3
ATP13A3-204ENST00000446356 PTPN13Q12923 2485 aa0.71□□□□□ -2.3
ATP13A3-204ENST00000446356 M0R2T5 61 aa0.7□□□□□ -2.3
ATP13A3-204ENST00000446356 VWFP04275 2813 aa0.7□□□□□ -2.3
ATP13A3-204ENST00000446356 H0YGG7 62 aa0.69□□□□□ -2.3
ATP13A3-204ENST00000446356 DEFB135Q30KP9 77 aa0.69□□□□□ -2.3
ATP13A3-204ENST00000446356 CROCC2H7BZ55 1655 aa0.69□□□□□ -2.3
ATP13A3-204ENST00000446356 H3BUA1 57 aa0.68□□□□□ -2.3
ATP13A3-204ENST00000446356 ABCA2Q9BZC7 2435 aa0.68□□□□□ -2.3
ATP13A3-204ENST00000446356 CLASP1Q7Z460 1538 aa0.68□□□□□ -2.3
ATP13A3-204ENST00000446356 WT1-ASQ06250 92 aa0.67□□□□□ -2.3
ATP13A3-204ENST00000446356 OTOGQ6ZRI0 2925 aa0.67□□□□□ -2.3
ATP13A3-204ENST00000446356 CHD8Q9HCK8 2581 aa0.66□□□□□ -2.3
ATP13A3-204ENST00000446356 MROH2AA6NES4 1674 aa0.66□□□□□ -2.3
ATP13A3-204ENST00000446356 EFCAB6Q5THR3 1501 aa0.66□□□□□ -2.3
ATP13A3-204ENST00000446356 LINC00308Q8TCZ7 52 aa0.66□□□□□ -2.3
ATP13A3-204ENST00000446356 KNL1Q8NG31 2342 aa0.66□□□□□ -2.3
ATP13A3-204ENST00000446356 MUC5BQ9HC84 5762 aaPredicted RBP0.66□□□□□ -2.3
ATP13A3-204ENST00000446356 RPS27P42677 84 aaKnown RBP0.65□□□□□ -2.31
ATP13A3-204ENST00000446356 RPS27LQ71UM5 84 aaKnown RBP0.65□□□□□ -2.31
ATP13A3-204ENST00000446356 ABCC8Q09428 1581 aa0.65□□□□□ -2.31
ATP13A3-204ENST00000446356 ITSN2Q9NZM3 1697 aa0.65□□□□□ -2.31
ATP13A3-204ENST00000446356 IGF2RP11717 2491 aa0.64□□□□□ -2.31
ATP13A3-204ENST00000446356 PDE4DIPQ5VU43 2346 aa0.64□□□□□ -2.31
ATP13A3-204ENST00000446356 AHNAKQ09666 5890 aaKnown RBP0.64□□□□□ -2.31
ATP13A3-204ENST00000446356 AGLP35573 1532 aa0.64□□□□□ -2.31
ATP13A3-204ENST00000446356 PRLHP81277 87 aa0.63□□□□□ -2.31
ATP13A3-204ENST00000446356 DSPP15924 2871 aaKnown RBP0.63□□□□□ -2.31
ATP13A3-204ENST00000446356 ABRACLQ9P1F3 81 aa0.62□□□□□ -2.31
ATP13A3-204ENST00000446356 CSPG4Q6UVK1 2322 aa0.62□□□□□ -2.31
ATP13A3-204ENST00000446356 HUWE1Q7Z6Z7 4374 aaKnown RBP0.62□□□□□ -2.31
ATP13A3-204ENST00000446356 ALMS1Q8TCU4 4167 aa0.61□□□□□ -2.31
ATP13A3-204ENST00000446356 PKD1L1Q8TDX9 2849 aa0.61□□□□□ -2.31
ATP13A3-204ENST00000446356 PRKDCP78527 4128 aaKnown RBP0.61□□□□□ -2.31
ATP13A3-204ENST00000446356 USP24Q9UPU5 2620 aa0.61□□□□□ -2.31
ATP13A3-204ENST00000446356 LINC01546A6NGU7 62 aa0.61□□□□□ -2.31
ATP13A3-204ENST00000446356 TIMM8BQ9Y5J9 83 aaPredicted RBP0.61□□□□□ -2.31
ATP13A3-204ENST00000446356 HECTD1Q9ULT8 2610 aa0.61□□□□□ -2.31
ATP13A3-204ENST00000446356 EP300Q09472 2414 aaPredicted RBP0.6□□□□□ -2.31
ATP13A3-204ENST00000446356 SMIM27A0A1W2PRY6 76 aa0.6□□□□□ -2.31
ATP13A3-204ENST00000446356 KRTAP21-1Q3LI58 79 aa0.6□□□□□ -2.31
ATP13A3-204ENST00000446356 S4R3F8 94 aa0.6□□□□□ -2.31
ATP13A3-204ENST00000446356 FAT2Q9NYQ8 4349 aa0.6□□□□□ -2.31
ATP13A3-204ENST00000446356 AKAP13Q12802 2813 aa0.6□□□□□ -2.31
ATP13A3-204ENST00000446356 DEFB106AQ8N104 65 aa0.59□□□□□ -2.31
ATP13A3-204ENST00000446356 NCOR1O75376 2440 aa0.59□□□□□ -2.32
ATP13A3-204ENST00000446356 ABCA5Q8WWZ7 1642 aa0.59□□□□□ -2.32
ATP13A3-204ENST00000446356 NAV2Q8IVL1 2488 aa0.58□□□□□ -2.32
ATP13A3-204ENST00000446356 PRM1P04553 51 aa0.58□□□□□ -2.32
ATP13A3-204ENST00000446356 TOMM5Q8N4H5 51 aa0.58□□□□□ -2.32
ATP13A3-204ENST00000446356 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
ATP13A3-204ENST00000446356 BSNQ9UPA5 3926 aa0.57□□□□□ -2.32
ATP13A3-204ENST00000446356 TNXBP22105 4242 aa0.57□□□□□ -2.32
ATP13A3-204ENST00000446356 SETXQ7Z333 2677 aaKnown RBP0.57□□□□□ -2.32
ATP13A3-204ENST00000446356 PHGR1C9JFL3 82 aa0.56□□□□□ -2.32
ATP13A3-204ENST00000446356 NOP10Q9NPE3 64 aaKnown RBP0.56□□□□□ -2.32
ATP13A3-204ENST00000446356 IGSF10Q6WRI0 2623 aa0.56□□□□□ -2.32
ATP13A3-204ENST00000446356 HIVEP3Q5T1R4 2406 aa0.56□□□□□ -2.32
ATP13A3-204ENST00000446356 PRRC2CQ9Y520 2896 aaKnown RBP0.55□□□□□ -2.32
ATP13A3-204ENST00000446356 LRP1Q07954 4544 aaKnown RBP0.55□□□□□ -2.32
ATP13A3-204ENST00000446356 NCOR2Q9Y618 2525 aa0.55□□□□□ -2.32
ATP13A3-204ENST00000446356 CDC42BPAQ5VT25 1732 aa0.54□□□□□ -2.32
ATP13A3-204ENST00000446356 CREBBPQ92793 2442 aa0.54□□□□□ -2.32
ATP13A3-204ENST00000446356 C9orf92A6NGG3 77 aa0.53□□□□□ -2.32
ATP13A3-204ENST00000446356 SPRR2DP22532 72 aa0.53□□□□□ -2.32
ATP13A3-204ENST00000446356 SMIM2Q9BVW6 85 aa0.53□□□□□ -2.32
ATP13A3-204ENST00000446356 UBR5O95071 2799 aaPredicted RBP0.53□□□□□ -2.32
ATP13A3-204ENST00000446356 NRXN3Q9Y4C0 1643 aa0.53□□□□□ -2.33
ATP13A3-204ENST00000446356 KMT2AQ03164 3969 aa0.52□□□□□ -2.33
ATP13A3-204ENST00000446356 MAP1BP46821 2468 aaKnown RBP0.52□□□□□ -2.33
ATP13A3-204ENST00000446356 CACNA1AO00555 2505 aa0.51□□□□□ -2.33
ATP13A3-204ENST00000446356 ANKRD36CQ5JPF3 1778 aa0.51□□□□□ -2.33
ATP13A3-204ENST00000446356 LPAP08519 4548 aa0.5□□□□□ -2.33
ATP13A3-204ENST00000446356 MYCBP2O75592 4640 aa0.5□□□□□ -2.33
ATP13A3-204ENST00000446356 IGLV5-48A0A075B6I7 105 aa0.49□□□□□ -2.33
ATP13A3-204ENST00000446356 KAAG1Q9UBP8 84 aa0.49□□□□□ -2.33
ATP13A3-204ENST00000446356 TOGARAM1Q9Y4F4 1720 aa0.49□□□□□ -2.33
ATP13A3-204ENST00000446356 PCNX1Q96RV3 2341 aa0.48□□□□□ -2.33
ATP13A3-204ENST00000446356 WFDC10BQ8IUB3 73 aa0.48□□□□□ -2.33
ATP13A3-204ENST00000446356 IQGAP2Q13576 1575 aa0.48□□□□□ -2.33
ATP13A3-204ENST00000446356 PKD1L2Q7Z442 2459 aa0.47□□□□□ -2.33
ATP13A3-204ENST00000446356 WNK1Q9H4A3 2382 aa0.47□□□□□ -2.33
ATP13A3-204ENST00000446356 LMO7Q8WWI1 1683 aa0.47□□□□□ -2.33
ATP13A3-204ENST00000446356 APC2O95996 2303 aa0.47□□□□□ -2.33
ATP13A3-204ENST00000446356 SYNE2Q8WXH0 6885 aaKnown RBP0.47□□□□□ -2.33
ATP13A3-204ENST00000446356 SPRR2BP35325 72 aa0.47□□□□□ -2.33
ATP13A3-204ENST00000446356 ACANP16112 2415 aa0.46□□□□□ -2.34
ATP13A3-204ENST00000446356 DEFB131AP59861 70 aa0.46□□□□□ -2.34
ATP13A3-204ENST00000446356 MDN1Q9NU22 5596 aa0.46□□□□□ -2.34
ATP13A3-204ENST00000446356 TNRC18O15417 2968 aaPredicted RBP0.45□□□□□ -2.34
ATP13A3-204ENST00000446356 CELSR1Q9NYQ6 3014 aa0.45□□□□□ -2.34
ATP13A3-204ENST00000446356 TFF3Q07654 80 aa0.45□□□□□ -2.34
ATP13A3-204ENST00000446356 CEP290O15078 2479 aa0.45□□□□□ -2.34
ATP13A3-204ENST00000446356 HRNRQ86YZ3 2850 aaPredicted RBP0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms