RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 PRLHP81277 87 aa3.22□□□□□ -1.89
HERC1-201ENST00000443617 LINC01556Q5JQF7 62 aa3.22□□□□□ -1.89
HERC1-201ENST00000443617 Q8NAQ8 132 aa3.22□□□□□ -1.89
HERC1-201ENST00000443617 KRTAP10-9P60411 292 aa3.22□□□□□ -1.89
HERC1-201ENST00000443617 COL6A3P12111 3177 aa3.21□□□□□ -1.89
HERC1-201ENST00000443617 A0A096LNI7 61 aa3.21□□□□□ -1.9
HERC1-201ENST00000443617 LY6G6CO95867 125 aa3.21□□□□□ -1.9
HERC1-201ENST00000443617 IGKV2-24A0A0C4DH68 120 aa3.21□□□□□ -1.9
HERC1-201ENST00000443617 NUPR2A6NF83 97 aa3.21□□□□□ -1.9
HERC1-201ENST00000443617 SMG1Q96Q15 3661 aaKnown RBP3.21□□□□□ -1.9
HERC1-201ENST00000443617 PRAC1Q96KF2 57 aa3.21□□□□□ -1.9
HERC1-201ENST00000443617 CRYBG3Q68DQ2 2970 aa3.2□□□□□ -1.9
HERC1-201ENST00000443617 IGHV6-1A0A0B4J1U7 121 aa3.2□□□□□ -1.9
HERC1-201ENST00000443617 H3BS24 57 aa3.2□□□□□ -1.9
HERC1-201ENST00000443617 SPINK7P58062 85 aa3.2□□□□□ -1.9
HERC1-201ENST00000443617 USP34Q70CQ2 3546 aa3.2□□□□□ -1.9
HERC1-201ENST00000443617 C11orf45Q8TAV5 145 aa3.2□□□□□ -1.9
HERC1-201ENST00000443617 IGLV5-37A0A075B6J1 123 aa3.2□□□□□ -1.9
HERC1-201ENST00000443617 TNP2Q05952 138 aa3.19□□□□□ -1.9
HERC1-201ENST00000443617 KRTAP29-1A8MX34 341 aaPredicted RBP3.19□□□□□ -1.9
HERC1-201ENST00000443617 TENM3Q9P273 2699 aa3.19□□□□□ -1.9
HERC1-201ENST00000443617 INAFM1C9JVW0 142 aa3.19□□□□□ -1.9
HERC1-201ENST00000443617 DEFB131BA0A096LNP1 70 aa3.19□□□□□ -1.9
HERC1-201ENST00000443617 CNBPP62633 177 aaKnown RBP3.19□□□□□ -1.9
HERC1-201ENST00000443617 REV3LO60673 3130 aa3.18□□□□□ -1.9
HERC1-201ENST00000443617 ZFHX3Q15911 3703 aa3.18□□□□□ -1.9
HERC1-201ENST00000443617 WDFY3Q8IZQ1 3526 aa3.18□□□□□ -1.9
HERC1-201ENST00000443617 ACYP2P14621 99 aa3.18□□□□□ -1.9
HERC1-201ENST00000443617 PDZD2O15018 2839 aa3.18□□□□□ -1.9
HERC1-201ENST00000443617 H3BNG1 76 aa3.18□□□□□ -1.9
HERC1-201ENST00000443617 TLX1NBP0CAT3 122 aa3.18□□□□□ -1.9
HERC1-201ENST00000443617 IGLV8-61A0A075B6I0 122 aa3.17□□□□□ -1.9
HERC1-201ENST00000443617 C9orf163Q8N9P6 203 aa3.17□□□□□ -1.9
HERC1-201ENST00000443617 SPRR1AP35321 89 aa3.17□□□□□ -1.9
HERC1-201ENST00000443617 LINC00313P59037 77 aa3.17□□□□□ -1.9
HERC1-201ENST00000443617 LINC00472Q9H8W2 130 aa3.16□□□□□ -1.9
HERC1-201ENST00000443617 DNAH10OSP0CZ25 163 aa3.16□□□□□ -1.9
HERC1-201ENST00000443617 LOC400499M0QZD8 3231 aa3.16□□□□□ -1.9
HERC1-201ENST00000443617 KRTAP26-1Q6PEX3 210 aa3.16□□□□□ -1.9
HERC1-201ENST00000443617 HRES1P13985 223 aa3.16□□□□□ -1.9
HERC1-201ENST00000443617 C8orf17Q9NRJ1 99 aa3.16□□□□□ -1.9
HERC1-201ENST00000443617 LINC01554Q52M75 96 aa3.16□□□□□ -1.9
HERC1-201ENST00000443617 MDFIQ99750 246 aa3.15□□□□□ -1.9
HERC1-201ENST00000443617 KRTAP4-16G5E9R7 235 aaPredicted RBP3.15□□□□□ -1.91
HERC1-201ENST00000443617 PRR26Q8N8Z3 221 aa3.15□□□□□ -1.91
HERC1-201ENST00000443617 ZNF706Q9Y5V0 76 aaPredicted RBP3.14□□□□□ -1.91
HERC1-201ENST00000443617 RETNLBQ9BQ08 111 aa3.14□□□□□ -1.91
HERC1-201ENST00000443617 SPENQ96T58 3664 aaKnown RBP3.14□□□□□ -1.91
HERC1-201ENST00000443617 IGLV9-49A0A0B4J1Y8 123 aa3.14□□□□□ -1.91
HERC1-201ENST00000443617 CASC10Q5T4H9 136 aa3.14□□□□□ -1.91
HERC1-201ENST00000443617 VWFP04275 2813 aa3.14□□□□□ -1.91
HERC1-201ENST00000443617 A0A1B0GU69 56 aa3.14□□□□□ -1.91
HERC1-201ENST00000443617 TENM4Q6N022 2769 aa3.14□□□□□ -1.91
HERC1-201ENST00000443617 MIR22HGQ0VDD5 57 aa3.13□□□□□ -1.91
HERC1-201ENST00000443617 DCHS1Q96JQ0 3298 aa3.13□□□□□ -1.91
HERC1-201ENST00000443617 A0A1B0GVX0 72 aa3.12□□□□□ -1.91
HERC1-201ENST00000443617 EYSQ5T1H1 3165 aa3.12□□□□□ -1.91
HERC1-201ENST00000443617 ASB16-AS1Q495Z4 193 aa3.12□□□□□ -1.91
HERC1-201ENST00000443617 MMP24-AS1A0A0U1RRL7 71 aa3.12□□□□□ -1.91
HERC1-201ENST00000443617 PLAC8Q9NZF1 115 aa3.12□□□□□ -1.91
HERC1-201ENST00000443617 LAMA5O15230 3695 aa3.11□□□□□ -1.91
HERC1-201ENST00000443617 KRTAP10-3P60369 221 aa3.11□□□□□ -1.91
HERC1-201ENST00000443617 J3QL48 77 aa3.1□□□□□ -1.91
HERC1-201ENST00000443617 Q6ZR54 194 aa3.1□□□□□ -1.91
HERC1-201ENST00000443617 AKAP9Q99996 3911 aa3.1□□□□□ -1.91
HERC1-201ENST00000443617 KRTAP1-3Q8IUG1 177 aa3.1□□□□□ -1.91
HERC1-201ENST00000443617 ZFHX4Q86UP3 3567 aa3.09□□□□□ -1.91
HERC1-201ENST00000443617 SPINK6Q6UWN8 80 aa3.09□□□□□ -1.91
HERC1-201ENST00000443617 SRRM2Q9UQ35 2752 aaKnown RBP3.09□□□□□ -1.91
HERC1-201ENST00000443617 IGLV5-52A0A0A0MRZ9 124 aa3.09□□□□□ -1.91
HERC1-201ENST00000443617 UQCR11O14957 56 aa3.09□□□□□ -1.91
HERC1-201ENST00000443617 CSAG1Q6PB30 78 aa3.09□□□□□ -1.92
HERC1-201ENST00000443617 SVEP1Q4LDE5 3571 aa3.09□□□□□ -1.92
HERC1-201ENST00000443617 SPRR1BP22528 89 aa3.09□□□□□ -1.92
HERC1-201ENST00000443617 A0A087X002 238 aa3.09□□□□□ -1.92
HERC1-201ENST00000443617 MRPL34Q9BQ48 92 aaKnown RBP3.09□□□□□ -1.92
HERC1-201ENST00000443617 SPATA8Q6RVD6 105 aa3.09□□□□□ -1.92
HERC1-201ENST00000443617 PLA2G1BP04054 148 aaKnown RBP3.08□□□□□ -1.92
HERC1-201ENST00000443617 ADM2Q7Z4H4 148 aa3.08□□□□□ -1.92
HERC1-201ENST00000443617 TENM1Q9UKZ4 2725 aa3.08□□□□□ -1.92
HERC1-201ENST00000443617 KRTAP7-1Q8IUC3 87 aa3.08□□□□□ -1.92
HERC1-201ENST00000443617 CHTF8P0CG12 524 aa3.08□□□□□ -1.92
HERC1-201ENST00000443617 CELSR1Q9NYQ6 3014 aa3.07□□□□□ -1.92
HERC1-201ENST00000443617 FAM229AH3BQW9 127 aa3.07□□□□□ -1.92
HERC1-201ENST00000443617 PKD1L1Q8TDX9 2849 aa3.06□□□□□ -1.92
HERC1-201ENST00000443617 SMR3AQ99954 134 aa3.06□□□□□ -1.92
HERC1-201ENST00000443617 CSMD1Q96PZ7 3565 aa3.06□□□□□ -1.92
HERC1-201ENST00000443617 K7EIL1 84 aa3.06□□□□□ -1.92
HERC1-201ENST00000443617 SPINK1P00995 79 aa3.06□□□□□ -1.92
HERC1-201ENST00000443617 DMAC1Q96GE9 116 aa3.05□□□□□ -1.92
HERC1-201ENST00000443617 KRTAP10-11P60412 298 aa3.05□□□□□ -1.92
HERC1-201ENST00000443617 IGKV2D-30A0A075B6S6 120 aa3.05□□□□□ -1.92
HERC1-201ENST00000443617 IGKV2-30P06310 120 aa3.05□□□□□ -1.92
HERC1-201ENST00000443617 KRTAP1-1Q07627 177 aa3.05□□□□□ -1.92
HERC1-201ENST00000443617 ANAPC11Q9NYG5 84 aa3.04□□□□□ -1.92
HERC1-201ENST00000443617 CIRBP-AS1Q8TBR5 109 aa3.04□□□□□ -1.92
HERC1-201ENST00000443617 TGP01266 2768 aa3.04□□□□□ -1.92
HERC1-201ENST00000443617 TENM2Q9NT68 2774 aa3.04□□□□□ -1.92
HERC1-201ENST00000443617 C1orf134Q5TEV5 83 aa3.04□□□□□ -1.92
HERC1-201ENST00000443617 COX6B2Q6YFQ2 88 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms