RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 F8WEM9 126 aa6.22□□□□□ -1.41
HDAC6-211ENST00000443563 GHRHP01286 108 aa6.22□□□□□ -1.41
HDAC6-211ENST00000443563 COX6CP09669 75 aa6.22□□□□□ -1.41
HDAC6-211ENST00000443563 SMIM29Q86T20 159 aa6.22□□□□□ -1.41
HDAC6-211ENST00000443563 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.41
HDAC6-211ENST00000443563 LPAP08519 4548 aa6.21□□□□□ -1.42
HDAC6-211ENST00000443563 TSTD3H0UI37 97 aa6.21□□□□□ -1.42
HDAC6-211ENST00000443563 M0R143 59 aa6.21□□□□□ -1.42
HDAC6-211ENST00000443563 PSMB2P49721 201 aa6.21□□□□□ -1.42
HDAC6-211ENST00000443563 TRIAP1O43715 76 aa6.2□□□□□ -1.42
HDAC6-211ENST00000443563 CD164Q04900 197 aa6.2□□□□□ -1.42
HDAC6-211ENST00000443563 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
HDAC6-211ENST00000443563 K7ERJ3 54 aa6.19□□□□□ -1.42
HDAC6-211ENST00000443563 FP248Q71RG6 208 aaPredicted RBP6.19□□□□□ -1.42
HDAC6-211ENST00000443563 RETNLBQ9BQ08 111 aa6.19□□□□□ -1.42
HDAC6-211ENST00000443563 SNHG12Q9BXW3 62 aa6.19□□□□□ -1.42
HDAC6-211ENST00000443563 DNAL4O96015 105 aa6.17□□□□□ -1.42
HDAC6-211ENST00000443563 Q6JHZ5 121 aa6.17□□□□□ -1.42
HDAC6-211ENST00000443563 FAM218AQ96MZ4 157 aa6.17□□□□□ -1.42
HDAC6-211ENST00000443563 IGLV7-46A0A075B6I9 117 aa6.16□□□□□ -1.42
HDAC6-211ENST00000443563 H3BQ85 93 aa6.16□□□□□ -1.42
HDAC6-211ENST00000443563 HRCT1Q6UXD1 115 aa6.16□□□□□ -1.42
HDAC6-211ENST00000443563 IGLV8-61A0A075B6I0 122 aa6.15□□□□□ -1.42
HDAC6-211ENST00000443563 SCGB1C2P0DMR2 95 aa6.14□□□□□ -1.43
HDAC6-211ENST00000443563 TPRXLQ17RH7 258 aa6.14□□□□□ -1.43
HDAC6-211ENST00000443563 CLEC2BQ92478 149 aa6.14□□□□□ -1.43
HDAC6-211ENST00000443563 ORMDL1Q9P0S3 153 aa6.13□□□□□ -1.43
HDAC6-211ENST00000443563 FABP2P12104 132 aa6.12□□□□□ -1.43
HDAC6-211ENST00000443563 NDUFV3P56181 108 aaKnown RBP6.12□□□□□ -1.43
HDAC6-211ENST00000443563 LCE2DQ5TA82 110 aaPredicted RBP6.12□□□□□ -1.43
HDAC6-211ENST00000443563 Q5XG85 94 aa6.12□□□□□ -1.43
HDAC6-211ENST00000443563 TMEM256-PLSCR3K7ERE1 68 aa6.11□□□□□ -1.43
HDAC6-211ENST00000443563 TCL1BO95988 128 aa6.11□□□□□ -1.43
HDAC6-211ENST00000443563 IGFL1Q6UW32 110 aa6.11□□□□□ -1.43
HDAC6-211ENST00000443563 CDIP1Q9H305 208 aa6.11□□□□□ -1.43
HDAC6-211ENST00000443563 TRACP01848 142 aa6.1□□□□□ -1.43
HDAC6-211ENST00000443563 A0A0G2JQZ4 141 aa6.09□□□□□ -1.43
HDAC6-211ENST00000443563 LST1O00453 97 aa6.09□□□□□ -1.43
HDAC6-211ENST00000443563 H3BMG7 143 aa6.08□□□□□ -1.44
HDAC6-211ENST00000443563 H3BUT2 72 aa6.08□□□□□ -1.44
HDAC6-211ENST00000443563 BATFQ16520 125 aa6.08□□□□□ -1.44
HDAC6-211ENST00000443563 LYRM7Q5U5X0 104 aa6.08□□□□□ -1.44
HDAC6-211ENST00000443563 TRBV7-7A0A0K0K1E9 115 aa6.07□□□□□ -1.44
HDAC6-211ENST00000443563 UBE2V1Q13404 147 aa6.06□□□□□ -1.44
HDAC6-211ENST00000443563 ATXN8Q156A1 80 aa6.06□□□□□ -1.44
HDAC6-211ENST00000443563 KRTAP13-3Q3SY46 172 aa6.06□□□□□ -1.44
HDAC6-211ENST00000443563 Q6Q795 121 aa6.06□□□□□ -1.44
HDAC6-211ENST00000443563 RNF213Q63HN8 5207 aa6.06□□□□□ -1.44
HDAC6-211ENST00000443563 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
HDAC6-211ENST00000443563 TEN1Q86WV5 123 aa6.05□□□□□ -1.44
HDAC6-211ENST00000443563 SS18L2Q9UHA2 77 aa6.05□□□□□ -1.44
HDAC6-211ENST00000443563 C1orf195Q5TG92 126 aa6.04□□□□□ -1.44
HDAC6-211ENST00000443563 TRBV20-1A0A075B6N2 111 aa6.03□□□□□ -1.44
HDAC6-211ENST00000443563 ANKRD29Q8N6D5 301 aa6.03□□□□□ -1.44
HDAC6-211ENST00000443563 NAA38Q9BRA0 125 aaKnown RBP6.03□□□□□ -1.44
HDAC6-211ENST00000443563 MUC17Q685J3 4493 aa6.03□□□□□ -1.44
HDAC6-211ENST00000443563 BAALC-AS2P0C853 105 aa6.01□□□□□ -1.45
HDAC6-211ENST00000443563 TRBV7-4A0A0J9YYF1 115 aa6□□□□□ -1.45
HDAC6-211ENST00000443563 C9orf118A6NHY6 69 aa6□□□□□ -1.45
HDAC6-211ENST00000443563 RBM3P98179 157 aaKnown RBP5.99□□□□□ -1.45
HDAC6-211ENST00000443563 DSCR8Q96T75 97 aa5.99□□□□□ -1.45
HDAC6-211ENST00000443563 A0A087WSZ3 146 aa5.98□□□□□ -1.45
HDAC6-211ENST00000443563 A0A1B0GV72 72 aa5.98□□□□□ -1.45
HDAC6-211ENST00000443563 TAX1BP3O14907 124 aa5.98□□□□□ -1.45
HDAC6-211ENST00000443563 A0A1W2PNM2 257 aa5.97□□□□□ -1.45
HDAC6-211ENST00000443563 A0A1W2PPM0 123 aa5.97□□□□□ -1.45
HDAC6-211ENST00000443563 JMJD7-PLA2G4BH0Y9G9 81 aa5.97□□□□□ -1.45
HDAC6-211ENST00000443563 CCKP06307 115 aa5.97□□□□□ -1.45
HDAC6-211ENST00000443563 C9orf92A6NGG3 77 aa5.96□□□□□ -1.46
HDAC6-211ENST00000443563 C9JAW5 83 aa5.96□□□□□ -1.46
HDAC6-211ENST00000443563 SEC61BP60468 96 aaKnown RBP5.96□□□□□ -1.46
HDAC6-211ENST00000443563 C21orf62-AS1Q17RA5 79 aa5.96□□□□□ -1.46
HDAC6-211ENST00000443563 XP32Q5T750 250 aa5.96□□□□□ -1.46
HDAC6-211ENST00000443563 COL5A1-AS1Q5SY13 56 aa5.95□□□□□ -1.46
HDAC6-211ENST00000443563 MUC2Q02817 5179 aa5.95□□□□□ -1.46
HDAC6-211ENST00000443563 PDE6GP18545 87 aa5.93□□□□□ -1.46
HDAC6-211ENST00000443563 VPS25Q9BRG1 176 aa5.93□□□□□ -1.46
HDAC6-211ENST00000443563 KRTAP3-3Q9BYR6 98 aa5.93□□□□□ -1.46
HDAC6-211ENST00000443563 KRTAP3-2Q9BYR7 98 aa5.93□□□□□ -1.46
HDAC6-211ENST00000443563 H3BT86 120 aa5.92□□□□□ -1.46
HDAC6-211ENST00000443563 A0A0U1RQV1 116 aa5.91□□□□□ -1.46
HDAC6-211ENST00000443563 A0A1B0GW54 56 aa5.91□□□□□ -1.46
HDAC6-211ENST00000443563 LOC110117498A0A087WWA1 95 aa5.9□□□□□ -1.46
HDAC6-211ENST00000443563 Q96NJ1 140 aa5.9□□□□□ -1.46
HDAC6-211ENST00000443563 SPCS1Q9Y6A9 102 aa5.9□□□□□ -1.46
HDAC6-211ENST00000443563 PCP4L1A6NKN8 68 aa5.89□□□□□ -1.47
HDAC6-211ENST00000443563 Q6ZQT0 140 aa5.88□□□□□ -1.47
HDAC6-211ENST00000443563 OBSCN-AS1Q96MR7 158 aa5.88□□□□□ -1.47
HDAC6-211ENST00000443563 SIGMAR1Q99720 223 aa5.88□□□□□ -1.47
HDAC6-211ENST00000443563 IGKV4-1P06312 121 aa5.87□□□□□ -1.47
HDAC6-211ENST00000443563 RPL37P61927 97 aaKnown RBP5.86□□□□□ -1.47
HDAC6-211ENST00000443563 LINC00472Q9H8W2 130 aa5.86□□□□□ -1.47
HDAC6-211ENST00000443563 C14orf132Q9NPU4 83 aa5.86□□□□□ -1.47
HDAC6-211ENST00000443563 J3KT08 172 aa5.85□□□□□ -1.47
HDAC6-211ENST00000443563 MTURNQ8N3F0 131 aa5.84□□□□□ -1.47
HDAC6-211ENST00000443563 K7EP34 96 aa5.83□□□□□ -1.48
HDAC6-211ENST00000443563 PCOTHQ58A44 107 aa5.83□□□□□ -1.48
HDAC6-211ENST00000443563 LINC00313P59037 77 aa5.82□□□□□ -1.48
HDAC6-211ENST00000443563 DEFB116Q30KQ4 102 aa5.82□□□□□ -1.48
HDAC6-211ENST00000443563 GTF2H5Q6ZYL4 71 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms