RNA–Protein interactions for RNA: ENST00000434734.1

HMGB3P10-201, Transcript of high mobility group box 3 pseudogene 10, humanhuman

BASIC

Gene HMGB3P10, Length 572 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P10-201ENST00000434734 DEFB109BQ30KR1 87 aa1.4□□□□□ -2.19
HMGB3P10-201ENST00000434734 NFAT5O94916 1531 aa1.4□□□□□ -2.19
HMGB3P10-201ENST00000434734 BDP1A6H8Y1 2624 aa1.37□□□□□ -2.19
HMGB3P10-201ENST00000434734 TRPM2O94759 1503 aa1.36□□□□□ -2.19
HMGB3P10-201ENST00000434734 IGF2RP11717 2491 aa1.35□□□□□ -2.19
HMGB3P10-201ENST00000434734 NCOR1O75376 2440 aa1.35□□□□□ -2.19
HMGB3P10-201ENST00000434734 PCNX1Q96RV3 2341 aa1.34□□□□□ -2.19
HMGB3P10-201ENST00000434734 DSPP15924 2871 aaKnown RBP1.34□□□□□ -2.2
HMGB3P10-201ENST00000434734 ABCA2Q9BZC7 2435 aa1.34□□□□□ -2.2
HMGB3P10-201ENST00000434734 WT1-ASQ06250 92 aa1.33□□□□□ -2.2
HMGB3P10-201ENST00000434734 FBN2P35556 2912 aa1.33□□□□□ -2.2
HMGB3P10-201ENST00000434734 TPRP12270 2363 aaKnown RBP1.33□□□□□ -2.2
HMGB3P10-201ENST00000434734 ATP7AQ04656 1500 aa1.32□□□□□ -2.2
HMGB3P10-201ENST00000434734 CSPG4Q6UVK1 2322 aa1.32□□□□□ -2.2
HMGB3P10-201ENST00000434734 KRTAP2-3P0C7H8 128 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 KRTAP19-3Q7Z4W3 81 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 SMIM2Q9BVW6 85 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 KRTAP2-4Q9BYR9 128 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 KRTAP2-1Q9BYU5 128 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 CSMD3Q7Z407 3707 aa1.31□□□□□ -2.2
HMGB3P10-201ENST00000434734 SPINK6Q6UWN8 80 aa1.3□□□□□ -2.2
HMGB3P10-201ENST00000434734 KIF21BO75037 1637 aa1.29□□□□□ -2.2
HMGB3P10-201ENST00000434734 FRAS1Q86XX4 4008 aa1.29□□□□□ -2.2
HMGB3P10-201ENST00000434734 SMR3AQ99954 134 aa1.29□□□□□ -2.2
HMGB3P10-201ENST00000434734 PIEZO1Q92508 2521 aa1.29□□□□□ -2.2
HMGB3P10-201ENST00000434734 VWFP04275 2813 aa1.28□□□□□ -2.2
HMGB3P10-201ENST00000434734 S4R3F8 94 aa1.28□□□□□ -2.2
HMGB3P10-201ENST00000434734 ATRQ13535 2644 aa1.28□□□□□ -2.2
HMGB3P10-201ENST00000434734 CRCT1Q9UGL9 99 aa1.27□□□□□ -2.21
HMGB3P10-201ENST00000434734 CHD6Q8TD26 2715 aa1.26□□□□□ -2.21
HMGB3P10-201ENST00000434734 TRANK1O15050 2925 aa1.26□□□□□ -2.21
HMGB3P10-201ENST00000434734 ANK2Q01484 3957 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 HMCN1Q96RW7 5635 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 WFDC10BQ8IUB3 73 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 KAAG1Q9UBP8 84 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 SAMD9LQ8IVG5 1584 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 SPTA1P02549 2419 aa1.25□□□□□ -2.21
HMGB3P10-201ENST00000434734 PRLHP81277 87 aa1.23□□□□□ -2.21
HMGB3P10-201ENST00000434734 APCP25054 2843 aa1.22□□□□□ -2.21
HMGB3P10-201ENST00000434734 TENM4Q6N022 2769 aa1.22□□□□□ -2.21
HMGB3P10-201ENST00000434734 DEFB106AQ8N104 65 aa1.22□□□□□ -2.21
HMGB3P10-201ENST00000434734 NDUFA1O15239 70 aa1.21□□□□□ -2.22
HMGB3P10-201ENST00000434734 BSNQ9UPA5 3926 aa1.19□□□□□ -2.22
HMGB3P10-201ENST00000434734 KRTAP4-1Q9BYQ7 146 aa1.18□□□□□ -2.22
HMGB3P10-201ENST00000434734 CELSR1Q9NYQ6 3014 aa1.17□□□□□ -2.22
HMGB3P10-201ENST00000434734 H3BUA1 57 aa1.17□□□□□ -2.22
HMGB3P10-201ENST00000434734 SPINK1P00995 79 aa1.17□□□□□ -2.22
HMGB3P10-201ENST00000434734 FBN3Q75N90 2809 aa1.15□□□□□ -2.23
HMGB3P10-201ENST00000434734 CHD8Q9HCK8 2581 aa1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 ZNF469Q96JG9 3925 aaPredicted RBP1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 SNRPGP62308 76 aaKnown RBP1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 DEFB135Q30KP9 77 aa1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 CLTCL1P53675 1640 aa1.14□□□□□ -2.23
HMGB3P10-201ENST00000434734 PRRC2CQ9Y520 2896 aaKnown RBP1.13□□□□□ -2.23
HMGB3P10-201ENST00000434734 M0R2T5 61 aa1.12□□□□□ -2.23
HMGB3P10-201ENST00000434734 U3KQA8 63 aa1.12□□□□□ -2.23
HMGB3P10-201ENST00000434734 EP300Q09472 2414 aaPredicted RBP1.11□□□□□ -2.23
HMGB3P10-201ENST00000434734 CEP290O15078 2479 aa1.11□□□□□ -2.23
HMGB3P10-201ENST00000434734 FAT2Q9NYQ8 4349 aa1.11□□□□□ -2.23
HMGB3P10-201ENST00000434734 AKAP13Q12802 2813 aa1.1□□□□□ -2.23
HMGB3P10-201ENST00000434734 PRM1P04553 51 aa1.1□□□□□ -2.23
HMGB3P10-201ENST00000434734 FCGBPQ9Y6R7 5405 aaPredicted RBP1.09□□□□□ -2.23
HMGB3P10-201ENST00000434734 MMP24-AS1A0A0U1RRL7 71 aa1.09□□□□□ -2.23
HMGB3P10-201ENST00000434734 OTOGQ6ZRI0 2925 aa1.09□□□□□ -2.23
HMGB3P10-201ENST00000434734 HECTD1Q9ULT8 2610 aa1.09□□□□□ -2.24
HMGB3P10-201ENST00000434734 NBASA2RRP1 2371 aa1.08□□□□□ -2.24
HMGB3P10-201ENST00000434734 PKD1L2Q7Z442 2459 aa1.08□□□□□ -2.24
HMGB3P10-201ENST00000434734 IGLV5-48A0A075B6I7 105 aa1.08□□□□□ -2.24
HMGB3P10-201ENST00000434734 TENM1Q9UKZ4 2725 aa1.07□□□□□ -2.24
HMGB3P10-201ENST00000434734 TNXBP22105 4242 aa1.07□□□□□ -2.24
HMGB3P10-201ENST00000434734 NOTCH1P46531 2555 aa1.06□□□□□ -2.24
HMGB3P10-201ENST00000434734 DUOX1Q9NRD9 1551 aa1.06□□□□□ -2.24
HMGB3P10-201ENST00000434734 H0YGG7 62 aa1.06□□□□□ -2.24
HMGB3P10-201ENST00000434734 PRKDCP78527 4128 aaKnown RBP1.06□□□□□ -2.24
HMGB3P10-201ENST00000434734 TNRC18O15417 2968 aaPredicted RBP1.05□□□□□ -2.24
HMGB3P10-201ENST00000434734 ZFYVE26Q68DK2 2539 aa1.05□□□□□ -2.24
HMGB3P10-201ENST00000434734 CREBBPQ92793 2442 aa1.04□□□□□ -2.24
HMGB3P10-201ENST00000434734 UNC79Q9P2D8 2635 aa1.03□□□□□ -2.24
HMGB3P10-201ENST00000434734 DEFB131AP59861 70 aa1.02□□□□□ -2.25
HMGB3P10-201ENST00000434734 MROH2BQ7Z745 1585 aa1.02□□□□□ -2.25
HMGB3P10-201ENST00000434734 PKD1L1Q8TDX9 2849 aa1.02□□□□□ -2.25
HMGB3P10-201ENST00000434734 WNK1Q9H4A3 2382 aa1□□□□□ -2.25
HMGB3P10-201ENST00000434734 NOP10Q9NPE3 64 aaKnown RBP1□□□□□ -2.25
HMGB3P10-201ENST00000434734 UBR5O95071 2799 aaPredicted RBP0.99□□□□□ -2.25
HMGB3P10-201ENST00000434734 LYSTQ99698 3801 aa0.99□□□□□ -2.25
HMGB3P10-201ENST00000434734 SRRM2Q9UQ35 2752 aaKnown RBP0.97□□□□□ -2.25
HMGB3P10-201ENST00000434734 SYNE1Q8NF91 8797 aaKnown RBP0.96□□□□□ -2.25
HMGB3P10-201ENST00000434734 MAP1BP46821 2468 aaKnown RBP0.96□□□□□ -2.26
HMGB3P10-201ENST00000434734 GCC2Q8IWJ2 1684 aa0.96□□□□□ -2.26
HMGB3P10-201ENST00000434734 HUWE1Q7Z6Z7 4374 aaKnown RBP0.95□□□□□ -2.26
HMGB3P10-201ENST00000434734 PTPN13Q12923 2485 aa0.95□□□□□ -2.26
HMGB3P10-201ENST00000434734 HIVEP3Q5T1R4 2406 aa0.95□□□□□ -2.26
HMGB3P10-201ENST00000434734 ACANP16112 2415 aa0.94□□□□□ -2.26
HMGB3P10-201ENST00000434734 RPL39P62891 51 aaKnown RBP0.93□□□□□ -2.26
HMGB3P10-201ENST00000434734 APC2O95996 2303 aa0.93□□□□□ -2.26
HMGB3P10-201ENST00000434734 A0A0C4DFX4 3053 aa0.92□□□□□ -2.26
HMGB3P10-201ENST00000434734 KRTAP21-1Q3LI58 79 aa0.92□□□□□ -2.26
HMGB3P10-201ENST00000434734 M0QY20 66 aa0.91□□□□□ -2.26
HMGB3P10-201ENST00000434734 POLR2KP53803 58 aaKnown RBP0.91□□□□□ -2.26
HMGB3P10-201ENST00000434734 PDZD2O15018 2839 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms