RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 HRES1P13985 223 aa6.99□□□□□ -1.29
PTCH1-205ENST00000418258 KTN1-AS1Q86SY8 53 aa6.99□□□□□ -1.29
PTCH1-205ENST00000418258 UNC79Q9P2D8 2635 aa6.99□□□□□ -1.29
PTCH1-205ENST00000418258 A0A1B0GU33 70 aa6.99□□□□□ -1.29
PTCH1-205ENST00000418258 Q1T7F1 81 aa6.97□□□□□ -1.29
PTCH1-205ENST00000418258 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
PTCH1-205ENST00000418258 RANBP2P49792 3224 aaKnown RBP6.96□□□□□ -1.3
PTCH1-205ENST00000418258 SETXQ7Z333 2677 aaKnown RBP6.95□□□□□ -1.3
PTCH1-205ENST00000418258 LCA10Q71F78 164 aa6.95□□□□□ -1.3
PTCH1-205ENST00000418258 Q5VSD8 79 aa6.95□□□□□ -1.3
PTCH1-205ENST00000418258 PLAC8Q9NZF1 115 aa6.95□□□□□ -1.3
PTCH1-205ENST00000418258 COL6A5A8TX70 2615 aa6.94□□□□□ -1.3
PTCH1-205ENST00000418258 ZCCHC13Q8WW36 166 aaKnown RBP6.94□□□□□ -1.3
PTCH1-205ENST00000418258 VPS13AQ96RL7 3174 aa6.93□□□□□ -1.3
PTCH1-205ENST00000418258 WDFY4Q6ZS81 3184 aa6.93□□□□□ -1.3
PTCH1-205ENST00000418258 SEC61BP60468 96 aaKnown RBP6.93□□□□□ -1.3
PTCH1-205ENST00000418258 OCR1Q9BZK8 76 aa6.91□□□□□ -1.3
PTCH1-205ENST00000418258 R4GN34 69 aa6.9□□□□□ -1.3
PTCH1-205ENST00000418258 MAP1AP78559 2803 aaPredicted RBP6.9□□□□□ -1.3
PTCH1-205ENST00000418258 FREM2Q5SZK8 3169 aa6.88□□□□□ -1.31
PTCH1-205ENST00000418258 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
PTCH1-205ENST00000418258 GCN1Q92616 2671 aaKnown RBP6.87□□□□□ -1.31
PTCH1-205ENST00000418258 DMAC1Q96GE9 116 aa6.87□□□□□ -1.31
PTCH1-205ENST00000418258 ITPR2Q14571 2701 aa6.87□□□□□ -1.31
PTCH1-205ENST00000418258 WIPF1O43516 503 aa6.86□□□□□ -1.31
PTCH1-205ENST00000418258 CDH23Q9H251 3354 aa6.86□□□□□ -1.31
PTCH1-205ENST00000418258 BAHCC1Q9P281 2608 aa6.85□□□□□ -1.31
PTCH1-205ENST00000418258 DNAH14Q0VDD8 3507 aa6.85□□□□□ -1.31
PTCH1-205ENST00000418258 SPINK7P58062 85 aa6.85□□□□□ -1.31
PTCH1-205ENST00000418258 KMT2BQ9UMN6 2715 aaPredicted RBP6.85□□□□□ -1.31
PTCH1-205ENST00000418258 REV3LO60673 3130 aa6.83□□□□□ -1.32
PTCH1-205ENST00000418258 FRYQ5TBA9 3013 aa6.83□□□□□ -1.32
PTCH1-205ENST00000418258 NOTCH1P46531 2555 aa6.83□□□□□ -1.32
PTCH1-205ENST00000418258 Q8N9P0 234 aaPredicted RBP6.83□□□□□ -1.32
PTCH1-205ENST00000418258 LCE6AA0A183 80 aa6.81□□□□□ -1.32
PTCH1-205ENST00000418258 MMP24-AS1A0A0U1RRL7 71 aa6.81□□□□□ -1.32
PTCH1-205ENST00000418258 TRANK1O15050 2925 aa6.81□□□□□ -1.32
PTCH1-205ENST00000418258 HTTP42858 3142 aa6.8□□□□□ -1.32
PTCH1-205ENST00000418258 Q5W150 140 aa6.8□□□□□ -1.32
PTCH1-205ENST00000418258 KRTAP10-1P60331 282 aa6.78□□□□□ -1.32
PTCH1-205ENST00000418258 ZNF292O60281 2723 aa6.78□□□□□ -1.32
PTCH1-205ENST00000418258 Q75L30 129 aa6.78□□□□□ -1.32
PTCH1-205ENST00000418258 KRTAP10-2P60368 255 aa6.77□□□□□ -1.33
PTCH1-205ENST00000418258 PLAC4Q8WY50 150 aa6.77□□□□□ -1.33
PTCH1-205ENST00000418258 DSPP15924 2871 aaKnown RBP6.76□□□□□ -1.33
PTCH1-205ENST00000418258 UNC80Q8N2C7 3258 aa6.76□□□□□ -1.33
PTCH1-205ENST00000418258 SPRR1AP35321 89 aa6.76□□□□□ -1.33
PTCH1-205ENST00000418258 KRTAP1-5Q9BYS1 174 aa6.76□□□□□ -1.33
PTCH1-205ENST00000418258 STAB2Q8WWQ8 2551 aa6.74□□□□□ -1.33
PTCH1-205ENST00000418258 M0QZ58 72 aa6.74□□□□□ -1.33
PTCH1-205ENST00000418258 Q8NDZ9 215 aa6.74□□□□□ -1.33
PTCH1-205ENST00000418258 CRYBG3Q68DQ2 2970 aa6.74□□□□□ -1.33
PTCH1-205ENST00000418258 OXTP01178 125 aa6.73□□□□□ -1.33
PTCH1-205ENST00000418258 NBEAL2Q6ZNJ1 2754 aa6.73□□□□□ -1.33
PTCH1-205ENST00000418258 CHD9Q3L8U1 2897 aa6.73□□□□□ -1.33
PTCH1-205ENST00000418258 LINC00472Q9H8W2 130 aa6.72□□□□□ -1.33
PTCH1-205ENST00000418258 LINC01558Q9Y6Z2 57 aa6.69□□□□□ -1.34
PTCH1-205ENST00000418258 KALRNO60229 2985 aa6.68□□□□□ -1.34
PTCH1-205ENST00000418258 LAMA1P25391 3075 aa6.68□□□□□ -1.34
PTCH1-205ENST00000418258 APCP25054 2843 aa6.68□□□□□ -1.34
PTCH1-205ENST00000418258 FP248Q71RG6 208 aaPredicted RBP6.67□□□□□ -1.34
PTCH1-205ENST00000418258 SPRR1BP22528 89 aa6.67□□□□□ -1.34
PTCH1-205ENST00000418258 ADM2Q7Z4H4 148 aa6.67□□□□□ -1.34
PTCH1-205ENST00000418258 COL6A3P12111 3177 aa6.66□□□□□ -1.34
PTCH1-205ENST00000418258 FRYLO94915 3013 aa6.66□□□□□ -1.34
PTCH1-205ENST00000418258 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.34
PTCH1-205ENST00000418258 H1FX-AS1Q4G0G2 97 aa6.64□□□□□ -1.35
PTCH1-205ENST00000418258 LRBAP50851 2863 aa6.63□□□□□ -1.35
PTCH1-205ENST00000418258 KRTAP26-1Q6PEX3 210 aa6.63□□□□□ -1.35
PTCH1-205ENST00000418258 A0A0A0MQY5 61 aa6.63□□□□□ -1.35
PTCH1-205ENST00000418258 SZT2Q5T011 3432 aa6.63□□□□□ -1.35
PTCH1-205ENST00000418258 VCANP13611 3396 aa6.63□□□□□ -1.35
PTCH1-205ENST00000418258 ROMO1P60602 79 aa6.62□□□□□ -1.35
PTCH1-205ENST00000418258 USP34Q70CQ2 3546 aa6.62□□□□□ -1.35
PTCH1-205ENST00000418258 PRAC1Q96KF2 57 aa6.61□□□□□ -1.35
PTCH1-205ENST00000418258 SPEGQ15772 3267 aa6.61□□□□□ -1.35
PTCH1-205ENST00000418258 DMXL2Q8TDJ6 3036 aa6.6□□□□□ -1.35
PTCH1-205ENST00000418258 CFAP47Q6ZTR5 3102 aa6.59□□□□□ -1.36
PTCH1-205ENST00000418258 IGSF10Q6WRI0 2623 aa6.58□□□□□ -1.36
PTCH1-205ENST00000418258 A0A087X002 238 aa6.58□□□□□ -1.36
PTCH1-205ENST00000418258 Q5VV11 94 aa6.58□□□□□ -1.36
PTCH1-205ENST00000418258 Q6ZR54 194 aa6.57□□□□□ -1.36
PTCH1-205ENST00000418258 UBR5O95071 2799 aaPredicted RBP6.57□□□□□ -1.36
PTCH1-205ENST00000418258 PANO1I0J062 215 aa6.56□□□□□ -1.36
PTCH1-205ENST00000418258 UTP20O75691 2785 aaKnown RBP6.56□□□□□ -1.36
PTCH1-205ENST00000418258 SPATA8Q6RVD6 105 aa6.55□□□□□ -1.36
PTCH1-205ENST00000418258 NSD1Q96L73 2696 aaPredicted RBP6.54□□□□□ -1.36
PTCH1-205ENST00000418258 BOD1L1Q8NFC6 3051 aa6.53□□□□□ -1.36
PTCH1-205ENST00000418258 ASH1LQ9NR48 2969 aaKnown RBP6.53□□□□□ -1.36
PTCH1-205ENST00000418258 CYSTM1Q9H1C7 97 aa6.52□□□□□ -1.37
PTCH1-205ENST00000418258 Q5XG85 94 aa6.48□□□□□ -1.37
PTCH1-205ENST00000418258 ITPR1Q14643 2758 aa6.47□□□□□ -1.37
PTCH1-205ENST00000418258 A8MUU9 505 aa6.45□□□□□ -1.38
PTCH1-205ENST00000418258 KRTAP4-16G5E9R7 235 aaPredicted RBP6.45□□□□□ -1.38
PTCH1-205ENST00000418258 COL12A1Q99715 3063 aa6.44□□□□□ -1.38
PTCH1-205ENST00000418258 TACC2O95359 2948 aa6.43□□□□□ -1.38
PTCH1-205ENST00000418258 SPTBN5Q9NRC6 3674 aaKnown RBP6.43□□□□□ -1.38
PTCH1-205ENST00000418258 C20orf166-AS1Q96NR2 134 aa6.42□□□□□ -1.38
PTCH1-205ENST00000418258 H3BS24 57 aa6.41□□□□□ -1.38
PTCH1-205ENST00000418258 NOTCH2NLQ7Z3S9 236 aa6.4□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms