RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 KRTAP10-1P60331 282 aa11.21□□□□□ -0.61
SHANK3-202ENST00000414786 HECTD1Q9ULT8 2610 aa11.21□□□□□ -0.62
SHANK3-202ENST00000414786 CFAP54Q96N23 3096 aa11.2□□□□□ -0.62
SHANK3-202ENST00000414786 MMP24-AS1A0A0U1RRL7 71 aa11.19□□□□□ -0.62
SHANK3-202ENST00000414786 Q75L30 129 aa11.19□□□□□ -0.62
SHANK3-202ENST00000414786 FP248Q71RG6 208 aaPredicted RBP11.18□□□□□ -0.62
SHANK3-202ENST00000414786 PLAC8Q9NZF1 115 aa11.18□□□□□ -0.62
SHANK3-202ENST00000414786 KLK9Q2XQG4 91 aa11.16□□□□□ -0.62
SHANK3-202ENST00000414786 C20orf166-AS1Q96NR2 134 aa11.16□□□□□ -0.62
SHANK3-202ENST00000414786 ROMO1P60602 79 aa11.14□□□□□ -0.63
SHANK3-202ENST00000414786 RPL37P61927 97 aaKnown RBP11.12□□□□□ -0.63
SHANK3-202ENST00000414786 MAST4O15021 2626 aa11.1□□□□□ -0.63
SHANK3-202ENST00000414786 LCE6AA0A183 80 aa11.04□□□□□ -0.64
SHANK3-202ENST00000414786 FLNBO75369 2602 aaKnown RBP11.04□□□□□ -0.64
SHANK3-202ENST00000414786 CYSTM1Q9H1C7 97 aa11.04□□□□□ -0.64
SHANK3-202ENST00000414786 Q8NDZ9 215 aa11.04□□□□□ -0.64
SHANK3-202ENST00000414786 LAMA2P24043 3122 aaKnown RBP11.03□□□□□ -0.64
SHANK3-202ENST00000414786 KRTAP1-5Q9BYS1 174 aa11.03□□□□□ -0.64
SHANK3-202ENST00000414786 LINC01558Q9Y6Z2 57 aa11.02□□□□□ -0.64
SHANK3-202ENST00000414786 Q5VV11 94 aa11.01□□□□□ -0.65
SHANK3-202ENST00000414786 CFAP46Q8IYW2 2715 aa11□□□□□ -0.65
SHANK3-202ENST00000414786 Q5XG85 94 aa11□□□□□ -0.65
SHANK3-202ENST00000414786 FREM2Q5SZK8 3169 aa10.99□□□□□ -0.65
SHANK3-202ENST00000414786 A0A0C4DFX4 3053 aa10.97□□□□□ -0.65
SHANK3-202ENST00000414786 ITPR3Q14573 2671 aa10.94□□□□□ -0.66
SHANK3-202ENST00000414786 OXTP01178 125 aa10.93□□□□□ -0.66
SHANK3-202ENST00000414786 DMBT1Q9UGM3 2413 aaPredicted RBP10.9□□□□□ -0.66
SHANK3-202ENST00000414786 FLNAP21333 2647 aaKnown RBP10.9□□□□□ -0.66
SHANK3-202ENST00000414786 CHD6Q8TD26 2715 aa10.9□□□□□ -0.66
SHANK3-202ENST00000414786 Q6ZR54 194 aa10.9□□□□□ -0.67
SHANK3-202ENST00000414786 LINC00472Q9H8W2 130 aa10.86□□□□□ -0.67
SHANK3-202ENST00000414786 KRTAP26-1Q6PEX3 210 aa10.86□□□□□ -0.67
SHANK3-202ENST00000414786 PANO1I0J062 215 aa10.86□□□□□ -0.67
SHANK3-202ENST00000414786 NBEAL1Q6ZS30 2694 aa10.85□□□□□ -0.67
SHANK3-202ENST00000414786 XIRP2A4UGR9 3374 aa10.85□□□□□ -0.67
SHANK3-202ENST00000414786 A8MU10 97 aa10.84□□□□□ -0.67
SHANK3-202ENST00000414786 A0A087X002 238 aa10.84□□□□□ -0.67
SHANK3-202ENST00000414786 A8MUU9 505 aa10.83□□□□□ -0.68
SHANK3-202ENST00000414786 STAB1Q9NY15 2570 aa10.81□□□□□ -0.68
SHANK3-202ENST00000414786 CENPEQ02224 2701 aa10.77□□□□□ -0.69
SHANK3-202ENST00000414786 C10orf95Q9H7T3 257 aa10.76□□□□□ -0.69
SHANK3-202ENST00000414786 A0A1B0GVY2 172 aa10.74□□□□□ -0.69
SHANK3-202ENST00000414786 CELSR3Q9NYQ7 3312 aa10.74□□□□□ -0.69
SHANK3-202ENST00000414786 TEX15Q9BXT5 2789 aa10.73□□□□□ -0.69
SHANK3-202ENST00000414786 SPRR1BP22528 89 aa10.73□□□□□ -0.69
SHANK3-202ENST00000414786 MKI67P46013 3256 aaKnown RBP10.72□□□□□ -0.69
SHANK3-202ENST00000414786 SPRR1AP35321 89 aa10.71□□□□□ -0.7
SHANK3-202ENST00000414786 NOTCH2NLQ7Z3S9 236 aa10.69□□□□□ -0.7
SHANK3-202ENST00000414786 STAB2Q8WWQ8 2551 aa10.66□□□□□ -0.7
SHANK3-202ENST00000414786 KRTAP16-1A8MUX0 517 aa10.65□□□□□ -0.7
SHANK3-202ENST00000414786 TRIOO75962 3097 aa10.64□□□□□ -0.71
SHANK3-202ENST00000414786 REV3LO60673 3130 aa10.63□□□□□ -0.71
SHANK3-202ENST00000414786 HELZ2Q9BYK8 2649 aaKnown RBP10.6□□□□□ -0.71
SHANK3-202ENST00000414786 KRTAP10-8P60410 259 aa10.57□□□□□ -0.72
SHANK3-202ENST00000414786 COL6A5A8TX70 2615 aa10.55□□□□□ -0.72
SHANK3-202ENST00000414786 RANBP2P49792 3224 aaKnown RBP10.55□□□□□ -0.72
SHANK3-202ENST00000414786 NDUFAF8A1L188 74 aa10.55□□□□□ -0.72
SHANK3-202ENST00000414786 UNC79Q9P2D8 2635 aa10.53□□□□□ -0.72
SHANK3-202ENST00000414786 NOTCH1P46531 2555 aa10.5□□□□□ -0.73
SHANK3-202ENST00000414786 TNP1P09430 55 aa10.49□□□□□ -0.73
SHANK3-202ENST00000414786 VPS13AQ96RL7 3174 aa10.49□□□□□ -0.73
SHANK3-202ENST00000414786 MGAQ8IWI9 3026 aa10.49□□□□□ -0.73
SHANK3-202ENST00000414786 BRCA2P51587 3418 aa10.46□□□□□ -0.73
SHANK3-202ENST00000414786 UNC80Q8N2C7 3258 aa10.45□□□□□ -0.74
SHANK3-202ENST00000414786 KRTAP11-1Q8IUC1 163 aa10.45□□□□□ -0.74
SHANK3-202ENST00000414786 GCN1Q92616 2671 aaKnown RBP10.43□□□□□ -0.74
SHANK3-202ENST00000414786 SETXQ7Z333 2677 aaKnown RBP10.42□□□□□ -0.74
SHANK3-202ENST00000414786 TEP1Q99973 2627 aaKnown RBP10.42□□□□□ -0.74
SHANK3-202ENST00000414786 FRYQ5TBA9 3013 aa10.42□□□□□ -0.74
SHANK3-202ENST00000414786 WDFY4Q6ZS81 3184 aa10.4□□□□□ -0.75
SHANK3-202ENST00000414786 KRTAP25-1Q3LHN0 102 aa10.39□□□□□ -0.75
SHANK3-202ENST00000414786 PRUNE2Q8WUY3 3088 aa10.39□□□□□ -0.75
SHANK3-202ENST00000414786 NBEAL2Q6ZNJ1 2754 aa10.36□□□□□ -0.75
SHANK3-202ENST00000414786 CHD7Q9P2D1 2997 aa10.35□□□□□ -0.75
SHANK3-202ENST00000414786 LAMA3Q16787 3333 aa10.35□□□□□ -0.75
SHANK3-202ENST00000414786 MAP1AP78559 2803 aaPredicted RBP10.33□□□□□ -0.76
SHANK3-202ENST00000414786 BAHCC1Q9P281 2608 aa10.3□□□□□ -0.76
SHANK3-202ENST00000414786 DNAH14Q0VDD8 3507 aa10.29□□□□□ -0.76
SHANK3-202ENST00000414786 CRYBG3Q68DQ2 2970 aa10.26□□□□□ -0.77
SHANK3-202ENST00000414786 KRTAP29-1A8MX34 341 aaPredicted RBP10.25□□□□□ -0.77
SHANK3-202ENST00000414786 KRTAP13-2Q52LG2 175 aa10.24□□□□□ -0.77
SHANK3-202ENST00000414786 KRTAP10-10P60014 251 aa10.23□□□□□ -0.77
SHANK3-202ENST00000414786 KALRNO60229 2985 aa10.21□□□□□ -0.77
SHANK3-202ENST00000414786 TRANK1O15050 2925 aa10.2□□□□□ -0.78
SHANK3-202ENST00000414786 KRTAP4-16G5E9R7 235 aaPredicted RBP10.19□□□□□ -0.78
SHANK3-202ENST00000414786 ASB16-AS1Q495Z4 193 aa10.19□□□□□ -0.78
SHANK3-202ENST00000414786 P0C880 135 aa10.18□□□□□ -0.78
SHANK3-202ENST00000414786 CDH23Q9H251 3354 aa10.18□□□□□ -0.78
SHANK3-202ENST00000414786 DMXL2Q8TDJ6 3036 aa10.16□□□□□ -0.78
SHANK3-202ENST00000414786 A6NN06 94 aa10.16□□□□□ -0.78
SHANK3-202ENST00000414786 DSPP15924 2871 aaKnown RBP10.16□□□□□ -0.78
SHANK3-202ENST00000414786 CFAP47Q6ZTR5 3102 aa10.15□□□□□ -0.78
SHANK3-202ENST00000414786 APCP25054 2843 aa10.13□□□□□ -0.79
SHANK3-202ENST00000414786 ASH1LQ9NR48 2969 aaKnown RBP10.1□□□□□ -0.79
SHANK3-202ENST00000414786 KMT2BQ9UMN6 2715 aaPredicted RBP10.07□□□□□ -0.8
SHANK3-202ENST00000414786 HTTP42858 3142 aa10.06□□□□□ -0.8
SHANK3-202ENST00000414786 COL6A3P12111 3177 aa10.04□□□□□ -0.8
SHANK3-202ENST00000414786 SZT2Q5T011 3432 aa10.04□□□□□ -0.8
SHANK3-202ENST00000414786 NSD1Q96L73 2696 aaPredicted RBP10.04□□□□□ -0.8
SHANK3-202ENST00000414786 Q6ZRN7 208 aaPredicted RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms