RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-204ENST00000414099 A0A0G2JQZ4 141 aa6.68□□□□□ -1.34
SCN5A-204ENST00000414099 NBEAL1Q6ZS30 2694 aa6.68□□□□□ -1.34
SCN5A-204ENST00000414099 PLAC8Q9NZF1 115 aa6.66□□□□□ -1.34
SCN5A-204ENST00000414099 DNAH14Q0VDD8 3507 aa6.62□□□□□ -1.35
SCN5A-204ENST00000414099 CHD6Q8TD26 2715 aa6.61□□□□□ -1.35
SCN5A-204ENST00000414099 UNC79Q9P2D8 2635 aa6.6□□□□□ -1.35
SCN5A-204ENST00000414099 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.59□□□□□ -1.35
SCN5A-204ENST00000414099 R4GN34 69 aa6.58□□□□□ -1.36
SCN5A-204ENST00000414099 ASB16-AS1Q495Z4 193 aa6.58□□□□□ -1.36
SCN5A-204ENST00000414099 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
SCN5A-204ENST00000414099 ROMO1P60602 79 aa6.57□□□□□ -1.36
SCN5A-204ENST00000414099 Q8N9P0 234 aaPredicted RBP6.56□□□□□ -1.36
SCN5A-204ENST00000414099 OXTP01178 125 aa6.56□□□□□ -1.36
SCN5A-204ENST00000414099 SPINK7P58062 85 aa6.56□□□□□ -1.36
SCN5A-204ENST00000414099 ITPR2Q14571 2701 aa6.55□□□□□ -1.36
SCN5A-204ENST00000414099 LAMA2P24043 3122 aaKnown RBP6.55□□□□□ -1.36
SCN5A-204ENST00000414099 GCN1Q92616 2671 aaKnown RBP6.53□□□□□ -1.36
SCN5A-204ENST00000414099 Q5W150 140 aa6.53□□□□□ -1.36
SCN5A-204ENST00000414099 RPL37P61927 97 aaKnown RBP6.53□□□□□ -1.36
SCN5A-204ENST00000414099 FP248Q71RG6 208 aaPredicted RBP6.52□□□□□ -1.37
SCN5A-204ENST00000414099 Q5VSD8 79 aa6.52□□□□□ -1.37
SCN5A-204ENST00000414099 SPRR1BP22528 89 aa6.52□□□□□ -1.37
SCN5A-204ENST00000414099 LCE6AA0A183 80 aa6.52□□□□□ -1.37
SCN5A-204ENST00000414099 TEP1Q99973 2627 aaKnown RBP6.51□□□□□ -1.37
SCN5A-204ENST00000414099 DMBT1Q9UGM3 2413 aaPredicted RBP6.51□□□□□ -1.37
SCN5A-204ENST00000414099 SPRR1AP35321 89 aa6.51□□□□□ -1.37
SCN5A-204ENST00000414099 ZNF292O60281 2723 aa6.5□□□□□ -1.37
SCN5A-204ENST00000414099 BAHCC1Q9P281 2608 aa6.49□□□□□ -1.37
SCN5A-204ENST00000414099 Q5VV11 94 aa6.49□□□□□ -1.37
SCN5A-204ENST00000414099 NOTCH1P46531 2555 aa6.49□□□□□ -1.37
SCN5A-204ENST00000414099 COL6A5A8TX70 2615 aa6.48□□□□□ -1.37
SCN5A-204ENST00000414099 PLAC4Q8WY50 150 aa6.48□□□□□ -1.37
SCN5A-204ENST00000414099 MKI67P46013 3256 aaKnown RBP6.47□□□□□ -1.37
SCN5A-204ENST00000414099 H1FX-AS1Q4G0G2 97 aa6.47□□□□□ -1.37
SCN5A-204ENST00000414099 LINC00472Q9H8W2 130 aa6.47□□□□□ -1.37
SCN5A-204ENST00000414099 Q5XG85 94 aa6.46□□□□□ -1.38
SCN5A-204ENST00000414099 BRCA2P51587 3418 aa6.45□□□□□ -1.38
SCN5A-204ENST00000414099 SETXQ7Z333 2677 aaKnown RBP6.45□□□□□ -1.38
SCN5A-204ENST00000414099 M0QZ58 72 aa6.41□□□□□ -1.38
SCN5A-204ENST00000414099 CFAP54Q96N23 3096 aa6.41□□□□□ -1.38
SCN5A-204ENST00000414099 XIRP2A4UGR9 3374 aa6.4□□□□□ -1.38
SCN5A-204ENST00000414099 PRAC1Q96KF2 57 aa6.4□□□□□ -1.39
SCN5A-204ENST00000414099 STAB2Q8WWQ8 2551 aa6.38□□□□□ -1.39
SCN5A-204ENST00000414099 Q6ZR54 194 aa6.37□□□□□ -1.39
SCN5A-204ENST00000414099 LAMA3Q16787 3333 aa6.36□□□□□ -1.39
SCN5A-204ENST00000414099 USP34Q70CQ2 3546 aa6.36□□□□□ -1.39
SCN5A-204ENST00000414099 KRTAP26-1Q6PEX3 210 aa6.35□□□□□ -1.39
SCN5A-204ENST00000414099 RANBP2P49792 3224 aaKnown RBP6.34□□□□□ -1.39
SCN5A-204ENST00000414099 TRANK1O15050 2925 aa6.34□□□□□ -1.39
SCN5A-204ENST00000414099 NSD1Q96L73 2696 aaPredicted RBP6.34□□□□□ -1.4
SCN5A-204ENST00000414099 KRTAP10-1P60331 282 aa6.34□□□□□ -1.4
SCN5A-204ENST00000414099 ADM2Q7Z4H4 148 aa6.33□□□□□ -1.4
SCN5A-204ENST00000414099 CHD7Q9P2D1 2997 aa6.33□□□□□ -1.4
SCN5A-204ENST00000414099 RPS29P62273 56 aaKnown RBP6.32□□□□□ -1.4
SCN5A-204ENST00000414099 MGAQ8IWI9 3026 aa6.31□□□□□ -1.4
SCN5A-204ENST00000414099 KRTAP16-1A8MUX0 517 aa6.3□□□□□ -1.4
SCN5A-204ENST00000414099 KRTAP1-5Q9BYS1 174 aa6.28□□□□□ -1.4
SCN5A-204ENST00000414099 CYSTM1Q9H1C7 97 aa6.28□□□□□ -1.4
SCN5A-204ENST00000414099 KRTAP10-2P60368 255 aa6.28□□□□□ -1.4
SCN5A-204ENST00000414099 PANO1I0J062 215 aa6.27□□□□□ -1.41
SCN5A-204ENST00000414099 CDH23Q9H251 3354 aa6.27□□□□□ -1.41
SCN5A-204ENST00000414099 VPS13AQ96RL7 3174 aa6.25□□□□□ -1.41
SCN5A-204ENST00000414099 CELSR3Q9NYQ7 3312 aa6.25□□□□□ -1.41
SCN5A-204ENST00000414099 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
SCN5A-204ENST00000414099 KRTAP21-3Q3LHN1 58 aa6.23□□□□□ -1.41
SCN5A-204ENST00000414099 UNC80Q8N2C7 3258 aa6.23□□□□□ -1.41
SCN5A-204ENST00000414099 Q8NDZ9 215 aa6.23□□□□□ -1.41
SCN5A-204ENST00000414099 APCP25054 2843 aa6.23□□□□□ -1.41
SCN5A-204ENST00000414099 TRIOO75962 3097 aa6.23□□□□□ -1.41
SCN5A-204ENST00000414099 REV3LO60673 3130 aa6.22□□□□□ -1.41
SCN5A-204ENST00000414099 MAP1AP78559 2803 aaPredicted RBP6.21□□□□□ -1.41
SCN5A-204ENST00000414099 IGSF10Q6WRI0 2623 aa6.21□□□□□ -1.42
SCN5A-204ENST00000414099 SZT2Q5T011 3432 aa6.21□□□□□ -1.42
SCN5A-204ENST00000414099 LAMA1P25391 3075 aa6.19□□□□□ -1.42
SCN5A-204ENST00000414099 HTTP42858 3142 aa6.19□□□□□ -1.42
SCN5A-204ENST00000414099 A0A087X002 238 aa6.19□□□□□ -1.42
SCN5A-204ENST00000414099 KRTAP25-1Q3LHN0 102 aa6.19□□□□□ -1.42
SCN5A-204ENST00000414099 C20orf166-AS1Q96NR2 134 aa6.19□□□□□ -1.42
SCN5A-204ENST00000414099 CHD9Q3L8U1 2897 aa6.18□□□□□ -1.42
SCN5A-204ENST00000414099 KRTAP29-1A8MX34 341 aaPredicted RBP6.18□□□□□ -1.42
SCN5A-204ENST00000414099 KRTAP4-16G5E9R7 235 aaPredicted RBP6.16□□□□□ -1.42
SCN5A-204ENST00000414099 VCANP13611 3396 aa6.16□□□□□ -1.42
SCN5A-204ENST00000414099 DSPP15924 2871 aaKnown RBP6.15□□□□□ -1.42
SCN5A-204ENST00000414099 NBEAL2Q6ZNJ1 2754 aa6.15□□□□□ -1.43
SCN5A-204ENST00000414099 A8MUU9 505 aa6.14□□□□□ -1.43
SCN5A-204ENST00000414099 MYO15AQ9UKN7 3530 aa6.13□□□□□ -1.43
SCN5A-204ENST00000414099 SPTBN5Q9NRC6 3674 aaKnown RBP6.12□□□□□ -1.43
SCN5A-204ENST00000414099 WDFY3Q8IZQ1 3526 aa6.11□□□□□ -1.43
SCN5A-204ENST00000414099 UBR5O95071 2799 aaPredicted RBP6.11□□□□□ -1.43
SCN5A-204ENST00000414099 PRUNE2Q8WUY3 3088 aa6.08□□□□□ -1.44
SCN5A-204ENST00000414099 TNP1P09430 55 aa6.08□□□□□ -1.44
SCN5A-204ENST00000414099 UTP20O75691 2785 aaKnown RBP6.07□□□□□ -1.44
SCN5A-204ENST00000414099 A6NN06 94 aa6.07□□□□□ -1.44
SCN5A-204ENST00000414099 COL6A3P12111 3177 aa6.07□□□□□ -1.44
SCN5A-204ENST00000414099 WDFY4Q6ZS81 3184 aa6.06□□□□□ -1.44
SCN5A-204ENST00000414099 FRYQ5TBA9 3013 aa6.06□□□□□ -1.44
SCN5A-204ENST00000414099 NBEAQ8NFP9 2946 aa6.06□□□□□ -1.44
SCN5A-204ENST00000414099 FLNCQ14315 2725 aa6.06□□□□□ -1.44
SCN5A-204ENST00000414099 FREM2Q5SZK8 3169 aa6.05□□□□□ -1.44
SCN5A-204ENST00000414099 PP632Q6XCG6 107 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms