RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 A0A0A0MQY5 61 aa7.24□□□□□ -1.25
CACNA1C-213ENST00000399629 UNC80Q8N2C7 3258 aa7.23□□□□□ -1.25
CACNA1C-213ENST00000399629 SPRR1AP35321 89 aa7.22□□□□□ -1.25
CACNA1C-213ENST00000399629 OCR1Q9BZK8 76 aa7.22□□□□□ -1.25
CACNA1C-213ENST00000399629 LAMA2P24043 3122 aaKnown RBP7.21□□□□□ -1.26
CACNA1C-213ENST00000399629 H1FX-AS1Q4G0G2 97 aa7.2□□□□□ -1.26
CACNA1C-213ENST00000399629 PRUNE2Q8WUY3 3088 aa7.2□□□□□ -1.26
CACNA1C-213ENST00000399629 SPRR1BP22528 89 aa7.19□□□□□ -1.26
CACNA1C-213ENST00000399629 ADM2Q7Z4H4 148 aa7.19□□□□□ -1.26
CACNA1C-213ENST00000399629 BPTFQ12830 3046 aa7.16□□□□□ -1.26
CACNA1C-213ENST00000399629 LINC00472Q9H8W2 130 aa7.14□□□□□ -1.27
CACNA1C-213ENST00000399629 Q6ZR54 194 aa7.14□□□□□ -1.27
CACNA1C-213ENST00000399629 CELSR3Q9NYQ7 3312 aa7.13□□□□□ -1.27
CACNA1C-213ENST00000399629 HECTD1Q9ULT8 2610 aa7.12□□□□□ -1.27
CACNA1C-213ENST00000399629 Q8NDZ9 215 aa7.11□□□□□ -1.27
CACNA1C-213ENST00000399629 USP34Q70CQ2 3546 aa7.11□□□□□ -1.27
CACNA1C-213ENST00000399629 PRAC1Q96KF2 57 aa7.11□□□□□ -1.27
CACNA1C-213ENST00000399629 Q75L30 129 aa7.1□□□□□ -1.27
CACNA1C-213ENST00000399629 KRTAP26-1Q6PEX3 210 aa7.09□□□□□ -1.27
CACNA1C-213ENST00000399629 RANBP2P49792 3224 aaKnown RBP7.09□□□□□ -1.28
CACNA1C-213ENST00000399629 RPL37P61927 97 aaKnown RBP7.08□□□□□ -1.28
CACNA1C-213ENST00000399629 LINC01558Q9Y6Z2 57 aa7.08□□□□□ -1.28
CACNA1C-213ENST00000399629 HTTP42858 3142 aa7.07□□□□□ -1.28
CACNA1C-213ENST00000399629 PANO1I0J062 215 aa7.06□□□□□ -1.28
CACNA1C-213ENST00000399629 KRTAP21-3Q3LHN1 58 aa7.06□□□□□ -1.28
CACNA1C-213ENST00000399629 A0A087X002 238 aa7.05□□□□□ -1.28
CACNA1C-213ENST00000399629 ROMO1P60602 79 aa7.04□□□□□ -1.28
CACNA1C-213ENST00000399629 MYO15AQ9UKN7 3530 aa7.03□□□□□ -1.28
CACNA1C-213ENST00000399629 SPTBN5Q9NRC6 3674 aaKnown RBP7.02□□□□□ -1.29
CACNA1C-213ENST00000399629 EPG5Q9HCE0 2579 aa7.01□□□□□ -1.29
CACNA1C-213ENST00000399629 EYSQ5T1H1 3165 aa7.01□□□□□ -1.29
CACNA1C-213ENST00000399629 MGAM2Q2M2H8 2515 aa7□□□□□ -1.29
CACNA1C-213ENST00000399629 C20orf166-AS1Q96NR2 134 aa7□□□□□ -1.29
CACNA1C-213ENST00000399629 CHD7Q9P2D1 2997 aa6.99□□□□□ -1.29
CACNA1C-213ENST00000399629 RPS29P62273 56 aaKnown RBP6.97□□□□□ -1.29
CACNA1C-213ENST00000399629 Q5XG85 94 aa6.97□□□□□ -1.29
CACNA1C-213ENST00000399629 VCANP13611 3396 aa6.97□□□□□ -1.29
CACNA1C-213ENST00000399629 SPEGQ15772 3267 aa6.95□□□□□ -1.3
CACNA1C-213ENST00000399629 A8MUU9 505 aa6.95□□□□□ -1.3
CACNA1C-213ENST00000399629 USP24Q9UPU5 2620 aa6.95□□□□□ -1.3
CACNA1C-213ENST00000399629 FLNBO75369 2602 aaKnown RBP6.94□□□□□ -1.3
CACNA1C-213ENST00000399629 SPATA8Q6RVD6 105 aa6.94□□□□□ -1.3
CACNA1C-213ENST00000399629 FLNAP21333 2647 aaKnown RBP6.9□□□□□ -1.3
CACNA1C-213ENST00000399629 ITPR3Q14573 2671 aa6.9□□□□□ -1.3
CACNA1C-213ENST00000399629 HELZ2Q9BYK8 2649 aaKnown RBP6.9□□□□□ -1.31
CACNA1C-213ENST00000399629 CFAP54Q96N23 3096 aa6.89□□□□□ -1.31
CACNA1C-213ENST00000399629 A0A0C4DFX4 3053 aa6.89□□□□□ -1.31
CACNA1C-213ENST00000399629 TRIOO75962 3097 aa6.89□□□□□ -1.31
CACNA1C-213ENST00000399629 Q6ZRN7 208 aaPredicted RBP6.87□□□□□ -1.31
CACNA1C-213ENST00000399629 COL6A3P12111 3177 aa6.85□□□□□ -1.31
CACNA1C-213ENST00000399629 Q5VV11 94 aa6.84□□□□□ -1.31
CACNA1C-213ENST00000399629 WDFY4Q6ZS81 3184 aa6.84□□□□□ -1.31
CACNA1C-213ENST00000399629 KRTAP4-16G5E9R7 235 aaPredicted RBP6.84□□□□□ -1.31
CACNA1C-213ENST00000399629 ASB16-AS1Q495Z4 193 aa6.83□□□□□ -1.32
CACNA1C-213ENST00000399629 CYSTM1Q9H1C7 97 aa6.8□□□□□ -1.32
CACNA1C-213ENST00000399629 NOTCH2NLQ7Z3S9 236 aa6.78□□□□□ -1.32
CACNA1C-213ENST00000399629 KRTAP11-1Q8IUC1 163 aa6.78□□□□□ -1.32
CACNA1C-213ENST00000399629 VPS13AQ96RL7 3174 aa6.78□□□□□ -1.32
CACNA1C-213ENST00000399629 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
CACNA1C-213ENST00000399629 LAMA1P25391 3075 aa6.77□□□□□ -1.33
CACNA1C-213ENST00000399629 KRTAP16-1A8MUX0 517 aa6.76□□□□□ -1.33
CACNA1C-213ENST00000399629 PRRC2CQ9Y520 2896 aaKnown RBP6.75□□□□□ -1.33
CACNA1C-213ENST00000399629 WDFY3Q8IZQ1 3526 aa6.74□□□□□ -1.33
CACNA1C-213ENST00000399629 MAST4O15021 2626 aa6.74□□□□□ -1.33
CACNA1C-213ENST00000399629 ATRQ13535 2644 aa6.74□□□□□ -1.33
CACNA1C-213ENST00000399629 TNP1P09430 55 aa6.73□□□□□ -1.33
CACNA1C-213ENST00000399629 FREM2Q5SZK8 3169 aa6.72□□□□□ -1.33
CACNA1C-213ENST00000399629 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
CACNA1C-213ENST00000399629 KRTAP29-1A8MX34 341 aaPredicted RBP6.71□□□□□ -1.33
CACNA1C-213ENST00000399629 CFAP46Q8IYW2 2715 aa6.71□□□□□ -1.33
CACNA1C-213ENST00000399629 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
CACNA1C-213ENST00000399629 A8MU10 97 aa6.66□□□□□ -1.34
CACNA1C-213ENST00000399629 CHD9Q3L8U1 2897 aa6.65□□□□□ -1.34
CACNA1C-213ENST00000399629 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
CACNA1C-213ENST00000399629 ASPMQ8IZT6 3477 aa6.64□□□□□ -1.35
CACNA1C-213ENST00000399629 BAHCC1Q9P281 2608 aa6.61□□□□□ -1.35
CACNA1C-213ENST00000399629 KRTAP13-1Q8IUC0 172 aa6.61□□□□□ -1.35
CACNA1C-213ENST00000399629 KRTAP7-1Q8IUC3 87 aa6.6□□□□□ -1.35
CACNA1C-213ENST00000399629 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
CACNA1C-213ENST00000399629 REV3LO60673 3130 aa6.6□□□□□ -1.35
CACNA1C-213ENST00000399629 FLG2Q5D862 2391 aaPredicted RBP6.6□□□□□ -1.35
CACNA1C-213ENST00000399629 STAB1Q9NY15 2570 aa6.57□□□□□ -1.36
CACNA1C-213ENST00000399629 MGAQ8IWI9 3026 aa6.57□□□□□ -1.36
CACNA1C-213ENST00000399629 CFAP47Q6ZTR5 3102 aa6.56□□□□□ -1.36
CACNA1C-213ENST00000399629 XP32Q5T750 250 aa6.56□□□□□ -1.36
CACNA1C-213ENST00000399629 NDUFAF8A1L188 74 aa6.55□□□□□ -1.36
CACNA1C-213ENST00000399629 P0C880 135 aa6.55□□□□□ -1.36
CACNA1C-213ENST00000399629 PRO2289Q9P1D8 64 aa6.55□□□□□ -1.36
CACNA1C-213ENST00000399629 FRYLO94915 3013 aa6.51□□□□□ -1.37
CACNA1C-213ENST00000399629 TPRXLQ17RH7 258 aa6.51□□□□□ -1.37
CACNA1C-213ENST00000399629 TEX15Q9BXT5 2789 aa6.51□□□□□ -1.37
CACNA1C-213ENST00000399629 DMDP11532 3685 aa6.5□□□□□ -1.37
CACNA1C-213ENST00000399629 TRANK1O15050 2925 aa6.5□□□□□ -1.37
CACNA1C-213ENST00000399629 KRTAP25-1Q3LHN0 102 aa6.48□□□□□ -1.37
CACNA1C-213ENST00000399629 BOD1L1Q8NFC6 3051 aa6.46□□□□□ -1.38
CACNA1C-213ENST00000399629 ZFHX4Q86UP3 3567 aa6.45□□□□□ -1.38
CACNA1C-213ENST00000399629 NBEAL1Q6ZS30 2694 aa6.42□□□□□ -1.38
CACNA1C-213ENST00000399629 DMBT1Q9UGM3 2413 aaPredicted RBP6.42□□□□□ -1.38
CACNA1C-213ENST00000399629 TEP1Q99973 2627 aaKnown RBP6.41□□□□□ -1.38
CACNA1C-213ENST00000399629 KRTAP1-4P0C5Y4 121 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms