RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 VPS13AQ96RL7 3174 aa7.91□□□□□ -1.14
CACNA1C-209ENST00000399603 GIG44P09565 113 aaPredicted RBP7.9□□□□□ -1.14
CACNA1C-209ENST00000399603 CASC10Q5T4H9 136 aa7.9□□□□□ -1.14
CACNA1C-209ENST00000399603 KRTAP1-3Q8IUG1 177 aa7.9□□□□□ -1.14
CACNA1C-209ENST00000399603 Q5XG85 94 aa7.9□□□□□ -1.15
CACNA1C-209ENST00000399603 Q5VV11 94 aa7.89□□□□□ -1.15
CACNA1C-209ENST00000399603 SPTBN4Q9H254 2564 aa7.89□□□□□ -1.15
CACNA1C-209ENST00000399603 FP248Q71RG6 208 aaPredicted RBP7.89□□□□□ -1.15
CACNA1C-209ENST00000399603 EPG5Q9HCE0 2579 aa7.88□□□□□ -1.15
CACNA1C-209ENST00000399603 KRTAP1-1Q07627 177 aa7.87□□□□□ -1.15
CACNA1C-209ENST00000399603 PRR34Q9NV39 138 aa7.86□□□□□ -1.15
CACNA1C-209ENST00000399603 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
CACNA1C-209ENST00000399603 A0A0C4DFX4 3053 aa7.85□□□□□ -1.15
CACNA1C-209ENST00000399603 ASPMQ8IZT6 3477 aa7.85□□□□□ -1.15
CACNA1C-209ENST00000399603 CNBPP62633 177 aaKnown RBP7.85□□□□□ -1.15
CACNA1C-209ENST00000399603 WDFY4Q6ZS81 3184 aa7.85□□□□□ -1.15
CACNA1C-209ENST00000399603 COL6A3P12111 3177 aa7.84□□□□□ -1.15
CACNA1C-209ENST00000399603 M0QZ58 72 aa7.83□□□□□ -1.16
CACNA1C-209ENST00000399603 C20orf166-AS1Q96NR2 134 aa7.83□□□□□ -1.16
CACNA1C-209ENST00000399603 LAMA1P25391 3075 aa7.83□□□□□ -1.16
CACNA1C-209ENST00000399603 ZCCHC13Q8WW36 166 aaKnown RBP7.82□□□□□ -1.16
CACNA1C-209ENST00000399603 FASNP49327 2511 aaKnown RBP7.81□□□□□ -1.16
CACNA1C-209ENST00000399603 TRIOO75962 3097 aa7.8□□□□□ -1.16
CACNA1C-209ENST00000399603 FREM2Q5SZK8 3169 aa7.79□□□□□ -1.16
CACNA1C-209ENST00000399603 CFAP54Q96N23 3096 aa7.78□□□□□ -1.16
CACNA1C-209ENST00000399603 HECTD1Q9ULT8 2610 aa7.78□□□□□ -1.16
CACNA1C-209ENST00000399603 USP24Q9UPU5 2620 aa7.77□□□□□ -1.17
CACNA1C-209ENST00000399603 SPATA8Q6RVD6 105 aa7.77□□□□□ -1.17
CACNA1C-209ENST00000399603 CYSTM1Q9H1C7 97 aa7.76□□□□□ -1.17
CACNA1C-209ENST00000399603 Q5W150 140 aa7.75□□□□□ -1.17
CACNA1C-209ENST00000399603 DCHS1Q96JQ0 3298 aa7.73□□□□□ -1.17
CACNA1C-209ENST00000399603 NDUFAF8A1L188 74 aa7.73□□□□□ -1.17
CACNA1C-209ENST00000399603 MMP24-AS1A0A0U1RRL7 71 aa7.72□□□□□ -1.17
CACNA1C-209ENST00000399603 LAMA5O15230 3695 aa7.7□□□□□ -1.18
CACNA1C-209ENST00000399603 Q8NDZ9 215 aa7.7□□□□□ -1.18
CACNA1C-209ENST00000399603 Q5VSD8 79 aa7.69□□□□□ -1.18
CACNA1C-209ENST00000399603 TNP2Q05952 138 aa7.68□□□□□ -1.18
CACNA1C-209ENST00000399603 HTTP42858 3142 aa7.68□□□□□ -1.18
CACNA1C-209ENST00000399603 ADM2Q7Z4H4 148 aa7.68□□□□□ -1.18
CACNA1C-209ENST00000399603 DMDP11532 3685 aa7.67□□□□□ -1.18
CACNA1C-209ENST00000399603 ZFHX4Q86UP3 3567 aa7.67□□□□□ -1.18
CACNA1C-209ENST00000399603 ANKRD17O75179 2603 aaKnown RBP7.66□□□□□ -1.18
CACNA1C-209ENST00000399603 FLNBO75369 2602 aaKnown RBP7.65□□□□□ -1.18
CACNA1C-209ENST00000399603 SEC61BP60468 96 aaKnown RBP7.57□□□□□ -1.2
CACNA1C-209ENST00000399603 PRRC2CQ9Y520 2896 aaKnown RBP7.56□□□□□ -1.2
CACNA1C-209ENST00000399603 OXTP01178 125 aa7.56□□□□□ -1.2
CACNA1C-209ENST00000399603 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
CACNA1C-209ENST00000399603 CHD7Q9P2D1 2997 aa7.53□□□□□ -1.2
CACNA1C-209ENST00000399603 C10orf95Q9H7T3 257 aa7.53□□□□□ -1.2
CACNA1C-209ENST00000399603 DMBT1Q9UGM3 2413 aaPredicted RBP7.53□□□□□ -1.2
CACNA1C-209ENST00000399603 MGAM2Q2M2H8 2515 aa7.52□□□□□ -1.21
CACNA1C-209ENST00000399603 RELNP78509 3460 aa7.5□□□□□ -1.21
CACNA1C-209ENST00000399603 A8MU10 97 aa7.5□□□□□ -1.21
CACNA1C-209ENST00000399603 FRYLO94915 3013 aa7.49□□□□□ -1.21
CACNA1C-209ENST00000399603 LINC00472Q9H8W2 130 aa7.49□□□□□ -1.21
CACNA1C-209ENST00000399603 ASB16-AS1Q495Z4 193 aa7.46□□□□□ -1.22
CACNA1C-209ENST00000399603 CHD9Q3L8U1 2897 aa7.43□□□□□ -1.22
CACNA1C-209ENST00000399603 CSMD1Q96PZ7 3565 aa7.42□□□□□ -1.22
CACNA1C-209ENST00000399603 ZFHX3Q15911 3703 aa7.42□□□□□ -1.22
CACNA1C-209ENST00000399603 KRTAP26-1Q6PEX3 210 aa7.41□□□□□ -1.22
CACNA1C-209ENST00000399603 PANO1I0J062 215 aa7.41□□□□□ -1.22
CACNA1C-209ENST00000399603 Q6ZR54 194 aa7.41□□□□□ -1.22
CACNA1C-209ENST00000399603 CFAP47Q6ZTR5 3102 aa7.4□□□□□ -1.22
CACNA1C-209ENST00000399603 ATRQ13535 2644 aa7.4□□□□□ -1.23
CACNA1C-209ENST00000399603 PLAC8Q9NZF1 115 aa7.39□□□□□ -1.23
CACNA1C-209ENST00000399603 SPENQ96T58 3664 aaKnown RBP7.37□□□□□ -1.23
CACNA1C-209ENST00000399603 STAB2Q8WWQ8 2551 aa7.36□□□□□ -1.23
CACNA1C-209ENST00000399603 A6NN06 94 aa7.35□□□□□ -1.23
CACNA1C-209ENST00000399603 A8MUU9 505 aa7.35□□□□□ -1.23
CACNA1C-209ENST00000399603 KRTAP1-5Q9BYS1 174 aa7.33□□□□□ -1.24
CACNA1C-209ENST00000399603 MAST4O15021 2626 aa7.32□□□□□ -1.24
CACNA1C-209ENST00000399603 LOC400499M0QZD8 3231 aa7.31□□□□□ -1.24
CACNA1C-209ENST00000399603 P0C880 135 aa7.31□□□□□ -1.24
CACNA1C-209ENST00000399603 SPRR1AP35321 89 aa7.31□□□□□ -1.24
CACNA1C-209ENST00000399603 FLNAP21333 2647 aaKnown RBP7.29□□□□□ -1.24
CACNA1C-209ENST00000399603 SPRR1BP22528 89 aa7.28□□□□□ -1.24
CACNA1C-209ENST00000399603 TNP1P09430 55 aa7.28□□□□□ -1.24
CACNA1C-209ENST00000399603 BOD1L1Q8NFC6 3051 aa7.27□□□□□ -1.25
CACNA1C-209ENST00000399603 SMG1Q96Q15 3661 aaKnown RBP7.24□□□□□ -1.25
CACNA1C-209ENST00000399603 STAB1Q9NY15 2570 aa7.23□□□□□ -1.25
CACNA1C-209ENST00000399603 FRYQ5TBA9 3013 aa7.23□□□□□ -1.25
CACNA1C-209ENST00000399603 HELZ2Q9BYK8 2649 aaKnown RBP7.22□□□□□ -1.25
CACNA1C-209ENST00000399603 ITPR3Q14573 2671 aa7.21□□□□□ -1.25
CACNA1C-209ENST00000399603 A0A087X002 238 aa7.19□□□□□ -1.26
CACNA1C-209ENST00000399603 NOTCH2NLQ7Z3S9 236 aa7.19□□□□□ -1.26
CACNA1C-209ENST00000399603 KRTAP10-1P60331 282 aa7.19□□□□□ -1.26
CACNA1C-209ENST00000399603 NBEAL1Q6ZS30 2694 aa7.17□□□□□ -1.26
CACNA1C-209ENST00000399603 LCE6AA0A183 80 aa7.17□□□□□ -1.26
CACNA1C-209ENST00000399603 KRTAP10-2P60368 255 aa7.16□□□□□ -1.26
CACNA1C-209ENST00000399603 MUC3AQ02505 3323 aa7.15□□□□□ -1.27
CACNA1C-209ENST00000399603 SVEP1Q4LDE5 3571 aa7.14□□□□□ -1.27
CACNA1C-209ENST00000399603 KRTAP4-16G5E9R7 235 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-209ENST00000399603 KRTAP29-1A8MX34 341 aaPredicted RBP7.13□□□□□ -1.27
CACNA1C-209ENST00000399603 KRTAP11-1Q8IUC1 163 aa7.12□□□□□ -1.27
CACNA1C-209ENST00000399603 AKAP13Q12802 2813 aa7.1□□□□□ -1.27
CACNA1C-209ENST00000399603 ZNF292O60281 2723 aa7.08□□□□□ -1.28
CACNA1C-209ENST00000399603 ADGRG4Q8IZF6 3080 aa7.07□□□□□ -1.28
CACNA1C-209ENST00000399603 NBPF19A0A087WUL8 3843 aa7.07□□□□□ -1.28
CACNA1C-209ENST00000399603 UNC79Q9P2D8 2635 aa7.07□□□□□ -1.28
CACNA1C-209ENST00000399603 KRTAP10-8P60410 259 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms