RNA–Protein interactions for RNA: ENST00000393387.5

PHF3-202, Transcript of PHD finger protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PHF3, Length 6,947 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-202ENST00000393387 KRTAP12-2P59991 146 aa1.75□□□□□ -2.13
PHF3-202ENST00000393387 HIVEP3Q5T1R4 2406 aa1.75□□□□□ -2.13
PHF3-202ENST00000393387 SPG11Q96JI7 2443 aa1.75□□□□□ -2.13
PHF3-202ENST00000393387 TPRXLQ17RH7 258 aa1.74□□□□□ -2.13
PHF3-202ENST00000393387 HYDINQ4G0P3 5121 aa1.74□□□□□ -2.13
PHF3-202ENST00000393387 PIEZO1Q92508 2521 aa1.73□□□□□ -2.13
PHF3-202ENST00000393387 NAV2Q8IVL1 2488 aa1.73□□□□□ -2.13
PHF3-202ENST00000393387 NOTCH2Q04721 2471 aa1.73□□□□□ -2.13
PHF3-202ENST00000393387 LOC100996750A0A140TA64 210 aa1.72□□□□□ -2.13
PHF3-202ENST00000393387 KRTAP4-6Q9BYQ5 205 aa1.72□□□□□ -2.13
PHF3-202ENST00000393387 Q6ZRN7 208 aaPredicted RBP1.72□□□□□ -2.13
PHF3-202ENST00000393387 KRTAP13-2Q52LG2 175 aa1.72□□□□□ -2.13
PHF3-202ENST00000393387 SONP18583 2426 aaKnown RBP1.71□□□□□ -2.13
PHF3-202ENST00000393387 KRTAP7-1Q8IUC3 87 aa1.71□□□□□ -2.14
PHF3-202ENST00000393387 GPR98Q8WXG9 6306 aa1.71□□□□□ -2.14
PHF3-202ENST00000393387 KRTAP19-4Q3LI73 84 aa1.7□□□□□ -2.14
PHF3-202ENST00000393387 MYO9AB2RTY4 2548 aa1.7□□□□□ -2.14
PHF3-202ENST00000393387 KRTAP9-9Q9BYP9 154 aa1.69□□□□□ -2.14
PHF3-202ENST00000393387 KRTAP9-4Q9BYQ2 154 aa1.69□□□□□ -2.14
PHF3-202ENST00000393387 PTPN13Q12923 2485 aa1.69□□□□□ -2.14
PHF3-202ENST00000393387 RIF1Q5UIP0 2472 aaKnown RBP1.69□□□□□ -2.14
PHF3-202ENST00000393387 CRCT1Q9UGL9 99 aa1.69□□□□□ -2.14
PHF3-202ENST00000393387 ZFHX2Q9C0A1 2572 aaPredicted RBP1.69□□□□□ -2.14
PHF3-202ENST00000393387 XP32Q5T750 250 aa1.68□□□□□ -2.14
PHF3-202ENST00000393387 MUC6Q6W4X9 2439 aa1.68□□□□□ -2.14
PHF3-202ENST00000393387 FN1P02751 2386 aaKnown RBP1.68□□□□□ -2.14
PHF3-202ENST00000393387 FLG2Q5D862 2391 aaPredicted RBP1.68□□□□□ -2.14
PHF3-202ENST00000393387 KRTAP1-3Q8IUG1 177 aa1.67□□□□□ -2.14
PHF3-202ENST00000393387 KRTAP1-1Q07627 177 aa1.67□□□□□ -2.14
PHF3-202ENST00000393387 KRTAP15-1Q3LI76 137 aa1.67□□□□□ -2.14
PHF3-202ENST00000393387 KRTAP4-12Q9BQ66 201 aa1.66□□□□□ -2.14
PHF3-202ENST00000393387 KRTAP10-10P60014 251 aa1.66□□□□□ -2.14
PHF3-202ENST00000393387 F8P00451 2351 aa1.66□□□□□ -2.14
PHF3-202ENST00000393387 CACNA1AO00555 2505 aa1.66□□□□□ -2.14
PHF3-202ENST00000393387 UBR4Q5T4S7 5183 aa1.66□□□□□ -2.14
PHF3-202ENST00000393387 SRCAPQ6ZRS2 3230 aa1.65□□□□□ -2.14
PHF3-202ENST00000393387 INE1O15225 51 aa1.64□□□□□ -2.15
PHF3-202ENST00000393387 MYO18BQ8IUG5 2567 aa1.63□□□□□ -2.15
PHF3-202ENST00000393387 KRTAP13-1Q8IUC0 172 aa1.63□□□□□ -2.15
PHF3-202ENST00000393387 ACANP16112 2415 aa1.62□□□□□ -2.15
PHF3-202ENST00000393387 KRTAP13-4Q3LI77 160 aa1.62□□□□□ -2.15
PHF3-202ENST00000393387 TRIOO75962 3097 aa1.62□□□□□ -2.15
PHF3-202ENST00000393387 LAMA2P24043 3122 aaKnown RBP1.62□□□□□ -2.15
PHF3-202ENST00000393387 KRTAP19-1Q8IUB9 90 aa1.61□□□□□ -2.15
PHF3-202ENST00000393387 KRTAP12-1P59990 96 aa1.61□□□□□ -2.15
PHF3-202ENST00000393387 ABCA13Q86UQ4 5058 aa1.61□□□□□ -2.15
PHF3-202ENST00000393387 LRRK2Q5S007 2527 aa1.6□□□□□ -2.15
PHF3-202ENST00000393387 MYCBP2O75592 4640 aa1.6□□□□□ -2.15
PHF3-202ENST00000393387 PKD1L2Q7Z442 2459 aa1.6□□□□□ -2.15
PHF3-202ENST00000393387 KIAA1109Q2LD37 5005 aa1.6□□□□□ -2.15
PHF3-202ENST00000393387 KRTAP23-1A1A580 65 aa1.6□□□□□ -2.15
PHF3-202ENST00000393387 TLN2Q9Y4G6 2542 aa1.59□□□□□ -2.15
PHF3-202ENST00000393387 KRTAP4-8Q9BYQ9 185 aa1.59□□□□□ -2.16
PHF3-202ENST00000393387 TLN1Q9Y490 2541 aaKnown RBP1.59□□□□□ -2.16
PHF3-202ENST00000393387 DMBT1Q9UGM3 2413 aaPredicted RBP1.58□□□□□ -2.16
PHF3-202ENST00000393387 RYR3Q15413 4870 aa1.58□□□□□ -2.16
PHF3-202ENST00000393387 KMT2CQ8NEZ4 4911 aaKnown RBP1.58□□□□□ -2.16
PHF3-202ENST00000393387 BIRC6Q9NR09 4857 aa1.57□□□□□ -2.16
PHF3-202ENST00000393387 PIEZO2Q9H5I5 2752 aa1.57□□□□□ -2.16
PHF3-202ENST00000393387 NCOR2Q9Y618 2525 aa1.57□□□□□ -2.16
PHF3-202ENST00000393387 CHD8Q9HCK8 2581 aa1.57□□□□□ -2.16
PHF3-202ENST00000393387 LCE3BQ5TA77 95 aa1.56□□□□□ -2.16
PHF3-202ENST00000393387 WDR87Q6ZQQ6 2873 aa1.56□□□□□ -2.16
PHF3-202ENST00000393387 BPTFQ12830 3046 aa1.55□□□□□ -2.16
PHF3-202ENST00000393387 MTORP42345 2549 aa1.55□□□□□ -2.16
PHF3-202ENST00000393387 ZFYVE26Q68DK2 2539 aa1.55□□□□□ -2.16
PHF3-202ENST00000393387 KRTAP9-6A0A140TA67 174 aa1.54□□□□□ -2.16
PHF3-202ENST00000393387 KRTAP1-4P0C5Y4 121 aa1.54□□□□□ -2.16
PHF3-202ENST00000393387 KRTAP10-5P60370 271 aa1.54□□□□□ -2.16
PHF3-202ENST00000393387 BDP1A6H8Y1 2624 aa1.54□□□□□ -2.16
PHF3-202ENST00000393387 MUC5BQ9HC84 5762 aaPredicted RBP1.53□□□□□ -2.16
PHF3-202ENST00000393387 KRTAP9-2Q9BYQ4 174 aa1.53□□□□□ -2.16
PHF3-202ENST00000393387 USP9XQ93008 2570 aaPredicted RBP1.53□□□□□ -2.16
PHF3-202ENST00000393387 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.52□□□□□ -2.17
PHF3-202ENST00000393387 JMJD1CQ15652 2540 aa1.52□□□□□ -2.17
PHF3-202ENST00000393387 ABCA12Q86UK0 2595 aa1.52□□□□□ -2.17
PHF3-202ENST00000393387 KRTAP13-3Q3SY46 172 aa1.51□□□□□ -2.17
PHF3-202ENST00000393387 SSPOA2VEC9 5147 aa1.51□□□□□ -2.17
PHF3-202ENST00000393387 HMCN2Q8NDA2 5059 aa1.5□□□□□ -2.17
PHF3-202ENST00000393387 FAT3Q8TDW7 4589 aa1.5□□□□□ -2.17
PHF3-202ENST00000393387 KRTAP3-1Q9BYR8 98 aa1.5□□□□□ -2.17
PHF3-202ENST00000393387 EPG5Q9HCE0 2579 aa1.5□□□□□ -2.17
PHF3-202ENST00000393387 KRTAP9-3Q9BYQ3 159 aa1.5□□□□□ -2.17
PHF3-202ENST00000393387 KRTAP9-7A8MTY7 169 aa1.49□□□□□ -2.17
PHF3-202ENST00000393387 IGF2RP11717 2491 aa1.49□□□□□ -2.17
PHF3-202ENST00000393387 KRTAP10-6P60371 365 aaPredicted RBP1.49□□□□□ -2.17
PHF3-202ENST00000393387 DNHD1Q96M86 4753 aa1.47□□□□□ -2.17
PHF3-202ENST00000393387 LCE3AQ5TA76 89 aa1.47□□□□□ -2.17
PHF3-202ENST00000393387 UNC80Q8N2C7 3258 aa1.47□□□□□ -2.17
PHF3-202ENST00000393387 ANKRD17O75179 2603 aaKnown RBP1.46□□□□□ -2.18
PHF3-202ENST00000393387 SETD2Q9BYW2 2564 aaPredicted RBP1.46□□□□□ -2.18
PHF3-202ENST00000393387 KRTAP4-8A0A0G2JLE6 195 aa1.46□□□□□ -2.18
PHF3-202ENST00000393387 KRTAP10-12P60413 245 aa1.46□□□□□ -2.18
PHF3-202ENST00000393387 MGAM2Q2M2H8 2515 aa1.45□□□□□ -2.18
PHF3-202ENST00000393387 ZNF292O60281 2723 aa1.45□□□□□ -2.18
PHF3-202ENST00000393387 FAT4Q6V0I7 4981 aa1.45□□□□□ -2.18
PHF3-202ENST00000393387 KRTAP4-7Q9BYR0 210 aa1.45□□□□□ -2.18
PHF3-202ENST00000393387 VWFP04275 2813 aa1.45□□□□□ -2.18
PHF3-202ENST00000393387 EYSQ5T1H1 3165 aa1.44□□□□□ -2.18
PHF3-202ENST00000393387 SPTBN4Q9H254 2564 aa1.44□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms