RNA–Protein interactions for RNA: ENST00000374708.8

COL11A2-203, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS P2 TSL 5 BASIC

Gene COL11A2, Length 6,209 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-203ENST00000374708 KRTAP1-5Q9BYS1 174 aa8.97□□□□□ -0.97
COL11A2-203ENST00000374708 PRRC2CQ9Y520 2896 aaKnown RBP8.95□□□□□ -0.98
COL11A2-203ENST00000374708 KRTAP10-2P60368 255 aa8.93□□□□□ -0.98
COL11A2-203ENST00000374708 FP248Q71RG6 208 aaPredicted RBP8.89□□□□□ -0.99
COL11A2-203ENST00000374708 OXTP01178 125 aa8.89□□□□□ -0.99
COL11A2-203ENST00000374708 M0QZ58 72 aa8.88□□□□□ -0.99
COL11A2-203ENST00000374708 CHD7Q9P2D1 2997 aa8.88□□□□□ -0.99
COL11A2-203ENST00000374708 H3BS24 57 aa8.87□□□□□ -0.99
COL11A2-203ENST00000374708 LAMA3Q16787 3333 aa8.87□□□□□ -0.99
COL11A2-203ENST00000374708 KRTAP26-1Q6PEX3 210 aa8.87□□□□□ -0.99
COL11A2-203ENST00000374708 FLNAP21333 2647 aaKnown RBP8.85□□□□□ -0.99
COL11A2-203ENST00000374708 PLAC4Q8WY50 150 aa8.85□□□□□ -0.99
COL11A2-203ENST00000374708 BPTFQ12830 3046 aa8.84□□□□□ -0.99
COL11A2-203ENST00000374708 RPL37P61927 97 aaKnown RBP8.84□□□□□ -0.99
COL11A2-203ENST00000374708 ITPR3Q14573 2671 aa8.81□□□□□ -1
COL11A2-203ENST00000374708 PRAC1Q96KF2 57 aa8.81□□□□□ -1
COL11A2-203ENST00000374708 A0A0A0MQY5 61 aa8.81□□□□□ -1
COL11A2-203ENST00000374708 Q5VV11 94 aa8.8□□□□□ -1
COL11A2-203ENST00000374708 RANBP2P49792 3224 aaKnown RBP8.79□□□□□ -1
COL11A2-203ENST00000374708 ROMO1P60602 79 aa8.79□□□□□ -1
COL11A2-203ENST00000374708 H1FX-AS1Q4G0G2 97 aa8.79□□□□□ -1
COL11A2-203ENST00000374708 XIRP2A4UGR9 3374 aa8.78□□□□□ -1
COL11A2-203ENST00000374708 HTTP42858 3142 aa8.78□□□□□ -1
COL11A2-203ENST00000374708 ADM2Q7Z4H4 148 aa8.77□□□□□ -1.01
COL11A2-203ENST00000374708 HELZ2Q9BYK8 2649 aaKnown RBP8.75□□□□□ -1.01
COL11A2-203ENST00000374708 Q6ZR54 194 aa8.75□□□□□ -1.01
COL11A2-203ENST00000374708 ATRQ13535 2644 aa8.74□□□□□ -1.01
COL11A2-203ENST00000374708 Q5XG85 94 aa8.73□□□□□ -1.01
COL11A2-203ENST00000374708 PRUNE2Q8WUY3 3088 aa8.72□□□□□ -1.01
COL11A2-203ENST00000374708 PANO1I0J062 215 aa8.72□□□□□ -1.01
COL11A2-203ENST00000374708 CDH23Q9H251 3354 aa8.71□□□□□ -1.01
COL11A2-203ENST00000374708 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.01
COL11A2-203ENST00000374708 MAST4O15021 2626 aa8.71□□□□□ -1.02
COL11A2-203ENST00000374708 A0A087X002 238 aa8.68□□□□□ -1.02
COL11A2-203ENST00000374708 UNC80Q8N2C7 3258 aa8.67□□□□□ -1.02
COL11A2-203ENST00000374708 KRTAP4-16G5E9R7 235 aaPredicted RBP8.65□□□□□ -1.03
COL11A2-203ENST00000374708 CFAP54Q96N23 3096 aa8.64□□□□□ -1.03
COL11A2-203ENST00000374708 SPATA8Q6RVD6 105 aa8.64□□□□□ -1.03
COL11A2-203ENST00000374708 SZT2Q5T011 3432 aa8.61□□□□□ -1.03
COL11A2-203ENST00000374708 LAMA2P24043 3122 aaKnown RBP8.61□□□□□ -1.03
COL11A2-203ENST00000374708 DNAH14Q0VDD8 3507 aa8.61□□□□□ -1.03
COL11A2-203ENST00000374708 CHD9Q3L8U1 2897 aa8.59□□□□□ -1.03
COL11A2-203ENST00000374708 CFAP46Q8IYW2 2715 aa8.58□□□□□ -1.04
COL11A2-203ENST00000374708 RPS29P62273 56 aaKnown RBP8.58□□□□□ -1.04
COL11A2-203ENST00000374708 KRTAP29-1A8MX34 341 aaPredicted RBP8.57□□□□□ -1.04
COL11A2-203ENST00000374708 STAB1Q9NY15 2570 aa8.56□□□□□ -1.04
COL11A2-203ENST00000374708 ASB16-AS1Q495Z4 193 aa8.53□□□□□ -1.04
COL11A2-203ENST00000374708 FLG2Q5D862 2391 aaPredicted RBP8.51□□□□□ -1.05
COL11A2-203ENST00000374708 NOTCH2NLQ7Z3S9 236 aa8.5□□□□□ -1.05
COL11A2-203ENST00000374708 CELSR3Q9NYQ7 3312 aa8.5□□□□□ -1.05
COL11A2-203ENST00000374708 A8MUU9 505 aa8.49□□□□□ -1.05
COL11A2-203ENST00000374708 TRIOO75962 3097 aa8.49□□□□□ -1.05
COL11A2-203ENST00000374708 MGAQ8IWI9 3026 aa8.48□□□□□ -1.05
COL11A2-203ENST00000374708 A0A0C4DFX4 3053 aa8.48□□□□□ -1.05
COL11A2-203ENST00000374708 WDFY4Q6ZS81 3184 aa8.48□□□□□ -1.05
COL11A2-203ENST00000374708 Q6ZRN7 208 aaPredicted RBP8.47□□□□□ -1.05
COL11A2-203ENST00000374708 KRTAP11-1Q8IUC1 163 aa8.45□□□□□ -1.06
COL11A2-203ENST00000374708 C20orf166-AS1Q96NR2 134 aa8.42□□□□□ -1.06
COL11A2-203ENST00000374708 NBEAL1Q6ZS30 2694 aa8.4□□□□□ -1.06
COL11A2-203ENST00000374708 CENPEQ02224 2701 aa8.38□□□□□ -1.07
COL11A2-203ENST00000374708 TEX15Q9BXT5 2789 aa8.38□□□□□ -1.07
COL11A2-203ENST00000374708 KRTAP13-2Q52LG2 175 aa8.38□□□□□ -1.07
COL11A2-203ENST00000374708 TRANK1O15050 2925 aa8.36□□□□□ -1.07
COL11A2-203ENST00000374708 A8MU10 97 aa8.34□□□□□ -1.07
COL11A2-203ENST00000374708 CHD6Q8TD26 2715 aa8.32□□□□□ -1.08
COL11A2-203ENST00000374708 KRTAP7-1Q8IUC3 87 aa8.31□□□□□ -1.08
COL11A2-203ENST00000374708 DMBT1Q9UGM3 2413 aaPredicted RBP8.31□□□□□ -1.08
COL11A2-203ENST00000374708 AKAP13Q12802 2813 aa8.3□□□□□ -1.08
COL11A2-203ENST00000374708 TEP1Q99973 2627 aaKnown RBP8.3□□□□□ -1.08
COL11A2-203ENST00000374708 KRTAP13-1Q8IUC0 172 aa8.28□□□□□ -1.08
COL11A2-203ENST00000374708 SPTBN5Q9NRC6 3674 aaKnown RBP8.28□□□□□ -1.08
COL11A2-203ENST00000374708 KRTAP21-3Q3LHN1 58 aa8.28□□□□□ -1.08
COL11A2-203ENST00000374708 VPS13AQ96RL7 3174 aa8.26□□□□□ -1.09
COL11A2-203ENST00000374708 VCANP13611 3396 aa8.26□□□□□ -1.09
COL11A2-203ENST00000374708 SETXQ7Z333 2677 aaKnown RBP8.26□□□□□ -1.09
COL11A2-203ENST00000374708 KRTAP25-1Q3LHN0 102 aa8.26□□□□□ -1.09
COL11A2-203ENST00000374708 USP34Q70CQ2 3546 aa8.26□□□□□ -1.09
COL11A2-203ENST00000374708 ZNF292O60281 2723 aa8.25□□□□□ -1.09
COL11A2-203ENST00000374708 TNP1P09430 55 aa8.24□□□□□ -1.09
COL11A2-203ENST00000374708 EYSQ5T1H1 3165 aa8.23□□□□□ -1.09
COL11A2-203ENST00000374708 COL6A5A8TX70 2615 aa8.22□□□□□ -1.09
COL11A2-203ENST00000374708 UNC79Q9P2D8 2635 aa8.22□□□□□ -1.09
COL11A2-203ENST00000374708 MYO15AQ9UKN7 3530 aa8.22□□□□□ -1.09
COL11A2-203ENST00000374708 FREM2Q5SZK8 3169 aa8.21□□□□□ -1.09
COL11A2-203ENST00000374708 COL6A3P12111 3177 aa8.21□□□□□ -1.09
COL11A2-203ENST00000374708 SPEGQ15772 3267 aa8.2□□□□□ -1.1
COL11A2-203ENST00000374708 LAMA1P25391 3075 aa8.18□□□□□ -1.1
COL11A2-203ENST00000374708 BAHCC1Q9P281 2608 aa8.17□□□□□ -1.1
COL11A2-203ENST00000374708 GCN1Q92616 2671 aaKnown RBP8.17□□□□□ -1.1
COL11A2-203ENST00000374708 KRTAP16-1A8MUX0 517 aa8.16□□□□□ -1.1
COL11A2-203ENST00000374708 DSPP15924 2871 aaKnown RBP8.15□□□□□ -1.1
COL11A2-203ENST00000374708 A6NN06 94 aa8.13□□□□□ -1.11
COL11A2-203ENST00000374708 FRYQ5TBA9 3013 aa8.1□□□□□ -1.11
COL11A2-203ENST00000374708 STAB2Q8WWQ8 2551 aa8.07□□□□□ -1.12
COL11A2-203ENST00000374708 C10orf95Q9H7T3 257 aa8.07□□□□□ -1.12
COL11A2-203ENST00000374708 NOTCH1P46531 2555 aa8.06□□□□□ -1.12
COL11A2-203ENST00000374708 MAP1AP78559 2803 aaPredicted RBP8.06□□□□□ -1.12
COL11A2-203ENST00000374708 NBEAL2Q6ZNJ1 2754 aa8.04□□□□□ -1.12
COL11A2-203ENST00000374708 KRTAP10-8P60410 259 aa8.04□□□□□ -1.12
COL11A2-203ENST00000374708 IGSF10Q6WRI0 2623 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 253 ms