RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 APLNQ9ULZ1 77 aa2.13□□□□□ -2.07
ECHDC1-205ENST00000368295 LHFPL6Q9Y693 200 aa2.13□□□□□ -2.07
ECHDC1-205ENST00000368295 H3BVH4 76 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 PSCAO43653 123 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 IGKV3-15P01624 115 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 SFTA2Q6UW10 78 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 CLECL1Q8IZS7 167 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 C4orf3Q8WVX3 66 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 LINC00167Q96N53 147 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 AMELXQ99217 191 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 MRPL33O75394 65 aaKnown RBP2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 HIGD2AQ9BW72 106 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 KLK12Q9UKR0 248 aa2.12□□□□□ -2.07
ECHDC1-205ENST00000368295 IGLV4-69A0A075B6H9 119 aa2.11□□□□□ -2.07
ECHDC1-205ENST00000368295 HMGN4O00479 90 aa2.11□□□□□ -2.07
ECHDC1-205ENST00000368295 LEPROTL1O95214 131 aa2.11□□□□□ -2.07
ECHDC1-205ENST00000368295 ARMS2P0C7Q2 107 aa2.11□□□□□ -2.07
ECHDC1-205ENST00000368295 PDE6HQ13956 83 aa2.11□□□□□ -2.07
ECHDC1-205ENST00000368295 TMSB15BA0A087X1C1 80 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 TFF1P04155 84 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 MT1HL1P0DM35 61 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 KRTAP25-1Q3LHN0 102 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 WFDC10AQ9H1F0 79 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 PSORS1C2Q9UIG4 136 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 IGKV3D-15A0A087WSY6 115 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 KRTAP9-6A8MVA2 160 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 D6R8Y8 96 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 KRTAP10-1P60331 282 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 CSAG1Q6PB30 78 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 MUSTN1Q8IVN3 82 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 NMES1Q9C002 83 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 MRPL36Q9P0J6 103 aaKnown RBP2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 ORMDL1Q9P0S3 153 aa2.1□□□□□ -2.07
ECHDC1-205ENST00000368295 WISP3O95389 354 aaPredicted RBP2.09□□□□□ -2.07
ECHDC1-205ENST00000368295 CNBPP62633 177 aaKnown RBP2.09□□□□□ -2.07
ECHDC1-205ENST00000368295 C14orf177Q52M58 125 aa2.09□□□□□ -2.07
ECHDC1-205ENST00000368295 FAM74A4Q5TZK3 123 aa2.09□□□□□ -2.07
ECHDC1-205ENST00000368295 DEFB104AQ8WTQ1 72 aa2.09□□□□□ -2.07
ECHDC1-205ENST00000368295 Q9BRP9 147 aa2.09□□□□□ -2.07
ECHDC1-205ENST00000368295 A0A0J9YY99 117 aa2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 A8MU10 97 aa2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 IGHV3-30P01768 117 aa2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 IGHV3-30-5P0DP03 117 aa2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 SSBP1Q04837 148 aaKnown RBP2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 KRTAP20-1Q3LI63 56 aa2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 SPINT4Q6UDR6 99 aa2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 LINC00322Q6ZN03 302 aaPredicted RBP2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 C9orf163Q8N9P6 203 aa2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 PRR34Q9NV39 138 aa2.09□□□□□ -2.08
ECHDC1-205ENST00000368295 GPR98Q8WXG9 6306 aa2.08□□□□□ -2.08
ECHDC1-205ENST00000368295 ZNF861PO60384 105 aa2.08□□□□□ -2.08
ECHDC1-205ENST00000368295 HCP5Q6MZN7 132 aa2.08□□□□□ -2.08
ECHDC1-205ENST00000368295 SMIM4Q8WVI0 70 aa2.08□□□□□ -2.08
ECHDC1-205ENST00000368295 PPP1R1CQ8WVI7 109 aa2.08□□□□□ -2.08
ECHDC1-205ENST00000368295 GFRA4Q9GZZ7 299 aa2.08□□□□□ -2.08
ECHDC1-205ENST00000368295 MACF1Q9UPN3 7388 aaKnown RBP2.08□□□□□ -2.08
ECHDC1-205ENST00000368295 TRBV7-4A0A0J9YYF1 115 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 PPP1R17O96001 155 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 SPAG11BQ08648 103 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 SPAG11AQ6PDA7 123 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 KIF25-AS1Q9Y6Z4 181 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 USH2AO75445 5202 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 PRH1P02810 166 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 KRTAP7-1Q8IUC3 87 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 PRR15LQ9BU68 103 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 CMC2Q9NRP2 79 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 PRO2289Q9P1D8 64 aa2.07□□□□□ -2.08
ECHDC1-205ENST00000368295 IGKV3-7A0A075B6H7 116 aa2.06□□□□□ -2.08
ECHDC1-205ENST00000368295 TRBV6-5A0A0K0K1A5 114 aa2.06□□□□□ -2.08
ECHDC1-205ENST00000368295 LINC01549A6NIU2 74 aa2.06□□□□□ -2.08
ECHDC1-205ENST00000368295 Q6ZTI0 123 aa2.06□□□□□ -2.08
ECHDC1-205ENST00000368295 FCGBPQ9Y6R7 5405 aaPredicted RBP2.06□□□□□ -2.08
ECHDC1-205ENST00000368295 TRBV30A0A0K0K1B3 111 aa2.05□□□□□ -2.08
ECHDC1-205ENST00000368295 DEFB4AO15263 64 aa2.05□□□□□ -2.08
ECHDC1-205ENST00000368295 KRTAP10-5P60370 271 aa2.05□□□□□ -2.08
ECHDC1-205ENST00000368295 R4GMQ9 66 aa2.05□□□□□ -2.08
ECHDC1-205ENST00000368295 A0A1B0GUT8 65 aa2.05□□□□□ -2.08
ECHDC1-205ENST00000368295 PPYP01298 95 aa2.05□□□□□ -2.08
ECHDC1-205ENST00000368295 F8VRH5 84 aa2.04□□□□□ -2.08
ECHDC1-205ENST00000368295 CTSGP08311 255 aa2.04□□□□□ -2.08
ECHDC1-205ENST00000368295 CCL3L1P16619 93 aa2.04□□□□□ -2.08
ECHDC1-205ENST00000368295 TXNDC17Q9BRA2 123 aa2.04□□□□□ -2.08
ECHDC1-205ENST00000368295 ABRACLQ9P1F3 81 aa2.04□□□□□ -2.08
ECHDC1-205ENST00000368295 R4GN34 69 aa2.04□□□□□ -2.08
ECHDC1-205ENST00000368295 NDUFB1O75438 58 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 IGKV1-17P01599 117 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 S100A3P33764 101 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 KRTAP10-4P60372 401 aaPredicted RBP2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 DEFB135Q30KP9 77 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 GDF5OSQ5U4N7 250 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 ZNF563Q8TA94 476 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 COX7B2Q8TF08 81 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 CYYR1Q96J86 154 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 LINC00846Q9NV44 126 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 SNURFQ9Y675 71 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 LINC01558Q9Y6Z2 57 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 PDE6GP18545 87 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 CCL18P55774 89 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 UBE2DNLQ8IWF7 75 aa2.03□□□□□ -2.08
ECHDC1-205ENST00000368295 UQCR11O14957 56 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms