RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 BRCA2P51587 3418 aa7.73□□□□□ -1.17
CDC42BPA-203ENST00000366766 Q1T7F1 81 aa7.73□□□□□ -1.17
CDC42BPA-203ENST00000366766 LINC00336Q6ZUF6 198 aa7.73□□□□□ -1.17
CDC42BPA-203ENST00000366766 FAM104AQ969W3 186 aa7.71□□□□□ -1.17
CDC42BPA-203ENST00000366766 ZZEF1O43149 2961 aa7.71□□□□□ -1.18
CDC42BPA-203ENST00000366766 LAMA1P25391 3075 aa7.71□□□□□ -1.18
CDC42BPA-203ENST00000366766 MIR22HGQ0VDD5 57 aa7.71□□□□□ -1.18
CDC42BPA-203ENST00000366766 ZANQ9Y493 2812 aa7.71□□□□□ -1.18
CDC42BPA-203ENST00000366766 APLNQ9ULZ1 77 aa7.7□□□□□ -1.18
CDC42BPA-203ENST00000366766 PSORS1C2Q9UIG4 136 aa7.7□□□□□ -1.18
CDC42BPA-203ENST00000366766 KTN1-AS1Q86SY8 53 aa7.68□□□□□ -1.18
CDC42BPA-203ENST00000366766 NF1P21359 2839 aa7.67□□□□□ -1.18
CDC42BPA-203ENST00000366766 FAM229BQ4G0N7 80 aa7.67□□□□□ -1.18
CDC42BPA-203ENST00000366766 A0A1W2PNN7 141 aa7.66□□□□□ -1.18
CDC42BPA-203ENST00000366766 CDC42SE1Q9NRR8 79 aa7.66□□□□□ -1.18
CDC42BPA-203ENST00000366766 DSCR10P59022 87 aa7.65□□□□□ -1.18
CDC42BPA-203ENST00000366766 SPRR1AP35321 89 aa7.64□□□□□ -1.19
CDC42BPA-203ENST00000366766 HIVEP1P15822 2718 aa7.62□□□□□ -1.19
CDC42BPA-203ENST00000366766 XIRP2A4UGR9 3374 aa7.62□□□□□ -1.19
CDC42BPA-203ENST00000366766 IGLV8-61A0A075B6I0 122 aa7.62□□□□□ -1.19
CDC42BPA-203ENST00000366766 IGLV7-46A0A075B6I9 117 aa7.62□□□□□ -1.19
CDC42BPA-203ENST00000366766 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
CDC42BPA-203ENST00000366766 CELSR2Q9HCU4 2923 aa7.59□□□□□ -1.19
CDC42BPA-203ENST00000366766 SPRR1BP22528 89 aa7.58□□□□□ -1.2
CDC42BPA-203ENST00000366766 LCA10Q71F78 164 aa7.56□□□□□ -1.2
CDC42BPA-203ENST00000366766 Q75L30 129 aa7.56□□□□□ -1.2
CDC42BPA-203ENST00000366766 ASH1LQ9NR48 2969 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-203ENST00000366766 CASC10Q5T4H9 136 aa7.55□□□□□ -1.2
CDC42BPA-203ENST00000366766 RBM12B-AS1Q9P1G2 102 aa7.54□□□□□ -1.2
CDC42BPA-203ENST00000366766 PLAC8Q9NZF1 115 aa7.52□□□□□ -1.21
CDC42BPA-203ENST00000366766 ADGRG4Q8IZF6 3080 aa7.52□□□□□ -1.21
CDC42BPA-203ENST00000366766 SPINT4Q6UDR6 99 aa7.52□□□□□ -1.21
CDC42BPA-203ENST00000366766 BOD1L1Q8NFC6 3051 aa7.52□□□□□ -1.21
CDC42BPA-203ENST00000366766 HRNRQ86YZ3 2850 aaPredicted RBP7.51□□□□□ -1.21
CDC42BPA-203ENST00000366766 A0A0G2JQZ4 141 aa7.49□□□□□ -1.21
CDC42BPA-203ENST00000366766 UNC80Q8N2C7 3258 aa7.49□□□□□ -1.21
CDC42BPA-203ENST00000366766 J3QL48 77 aa7.48□□□□□ -1.21
CDC42BPA-203ENST00000366766 CDH23Q9H251 3354 aa7.48□□□□□ -1.21
CDC42BPA-203ENST00000366766 LINC00472Q9H8W2 130 aa7.47□□□□□ -1.21
CDC42BPA-203ENST00000366766 MMP24-AS1A0A0U1RRL7 71 aa7.46□□□□□ -1.21
CDC42BPA-203ENST00000366766 ATMQ13315 3056 aa7.46□□□□□ -1.21
CDC42BPA-203ENST00000366766 DMXL2Q8TDJ6 3036 aa7.46□□□□□ -1.22
CDC42BPA-203ENST00000366766 ANAPC11Q9NYG5 84 aa7.46□□□□□ -1.22
CDC42BPA-203ENST00000366766 LINC01558Q9Y6Z2 57 aa7.44□□□□□ -1.22
CDC42BPA-203ENST00000366766 C9orf92A6NGG3 77 aa7.44□□□□□ -1.22
CDC42BPA-203ENST00000366766 COL12A1Q99715 3063 aa7.43□□□□□ -1.22
CDC42BPA-203ENST00000366766 COX6B2Q6YFQ2 88 aa7.43□□□□□ -1.22
CDC42BPA-203ENST00000366766 MXRA5Q9NR99 2828 aa7.43□□□□□ -1.22
CDC42BPA-203ENST00000366766 Q8N9P0 234 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-203ENST00000366766 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-203ENST00000366766 FBN2P35556 2912 aa7.42□□□□□ -1.22
CDC42BPA-203ENST00000366766 HRES1P13985 223 aa7.41□□□□□ -1.22
CDC42BPA-203ENST00000366766 DCHS2Q6V1P9 2916 aa7.41□□□□□ -1.22
CDC42BPA-203ENST00000366766 Q8NDZ9 215 aa7.4□□□□□ -1.22
CDC42BPA-203ENST00000366766 KRTAP26-1Q6PEX3 210 aa7.39□□□□□ -1.23
CDC42BPA-203ENST00000366766 A0A1B0GU33 70 aa7.38□□□□□ -1.23
CDC42BPA-203ENST00000366766 CELSR3Q9NYQ7 3312 aa7.38□□□□□ -1.23
CDC42BPA-203ENST00000366766 TNP2Q05952 138 aa7.38□□□□□ -1.23
CDC42BPA-203ENST00000366766 ZCCHC13Q8WW36 166 aaKnown RBP7.38□□□□□ -1.23
CDC42BPA-203ENST00000366766 Q5XG85 94 aa7.38□□□□□ -1.23
CDC42BPA-203ENST00000366766 Q8N1X5 172 aa7.38□□□□□ -1.23
CDC42BPA-203ENST00000366766 LINC00483Q53H64 154 aa7.38□□□□□ -1.23
CDC42BPA-203ENST00000366766 PRR26Q8N8Z3 221 aa7.38□□□□□ -1.23
CDC42BPA-203ENST00000366766 TNRC18O15417 2968 aaPredicted RBP7.36□□□□□ -1.23
CDC42BPA-203ENST00000366766 USP34Q70CQ2 3546 aa7.36□□□□□ -1.23
CDC42BPA-203ENST00000366766 FP248Q71RG6 208 aaPredicted RBP7.35□□□□□ -1.23
CDC42BPA-203ENST00000366766 VCANP13611 3396 aa7.35□□□□□ -1.23
CDC42BPA-203ENST00000366766 DNAH14Q0VDD8 3507 aa7.34□□□□□ -1.23
CDC42BPA-203ENST00000366766 KRTAP4-16G5E9R7 235 aaPredicted RBP7.34□□□□□ -1.23
CDC42BPA-203ENST00000366766 FREM2Q5SZK8 3169 aa7.34□□□□□ -1.23
CDC42BPA-203ENST00000366766 DMAC1Q96GE9 116 aa7.33□□□□□ -1.24
CDC42BPA-203ENST00000366766 SMR3BP02814 79 aaPredicted RBP7.32□□□□□ -1.24
CDC42BPA-203ENST00000366766 Q6ZR54 194 aa7.32□□□□□ -1.24
CDC42BPA-203ENST00000366766 ASB16-AS1Q495Z4 193 aa7.32□□□□□ -1.24
CDC42BPA-203ENST00000366766 CRYBG3Q68DQ2 2970 aa7.31□□□□□ -1.24
CDC42BPA-203ENST00000366766 COL6A3P12111 3177 aa7.31□□□□□ -1.24
CDC42BPA-203ENST00000366766 Q5W150 140 aa7.3□□□□□ -1.24
CDC42BPA-203ENST00000366766 Q6ZSA8 131 aa7.29□□□□□ -1.24
CDC42BPA-203ENST00000366766 Q5VV11 94 aa7.29□□□□□ -1.24
CDC42BPA-203ENST00000366766 TENM1Q9UKZ4 2725 aa7.28□□□□□ -1.24
CDC42BPA-203ENST00000366766 TENM3Q9P273 2699 aa7.28□□□□□ -1.24
CDC42BPA-203ENST00000366766 CYSTM1Q9H1C7 97 aa7.27□□□□□ -1.25
CDC42BPA-203ENST00000366766 LUZP6Q538Z0 58 aa7.26□□□□□ -1.25
CDC42BPA-203ENST00000366766 SZT2Q5T011 3432 aa7.25□□□□□ -1.25
CDC42BPA-203ENST00000366766 KRTAP1-5Q9BYS1 174 aa7.24□□□□□ -1.25
CDC42BPA-203ENST00000366766 CSAG1Q6PB30 78 aa7.24□□□□□ -1.25
CDC42BPA-203ENST00000366766 TENM4Q6N022 2769 aa7.23□□□□□ -1.25
CDC42BPA-203ENST00000366766 A0A0D9SG42 100 aa7.23□□□□□ -1.25
CDC42BPA-203ENST00000366766 KRTAP29-1A8MX34 341 aaPredicted RBP7.21□□□□□ -1.25
CDC42BPA-203ENST00000366766 LINC01554Q52M75 96 aa7.21□□□□□ -1.26
CDC42BPA-203ENST00000366766 RPS29P62273 56 aaKnown RBP7.2□□□□□ -1.26
CDC42BPA-203ENST00000366766 DMXL1Q9Y485 3027 aa7.2□□□□□ -1.26
CDC42BPA-203ENST00000366766 S4R3F8 94 aa7.19□□□□□ -1.26
CDC42BPA-203ENST00000366766 LCE6AA0A183 80 aa7.16□□□□□ -1.26
CDC42BPA-203ENST00000366766 SPINK7P58062 85 aa7.16□□□□□ -1.26
CDC42BPA-203ENST00000366766 CFAP47Q6ZTR5 3102 aa7.16□□□□□ -1.26
CDC42BPA-203ENST00000366766 SPTBN5Q9NRC6 3674 aaKnown RBP7.16□□□□□ -1.26
CDC42BPA-203ENST00000366766 REV3LO60673 3130 aa7.15□□□□□ -1.26
CDC42BPA-203ENST00000366766 SEC61BP60468 96 aaKnown RBP7.13□□□□□ -1.27
CDC42BPA-203ENST00000366766 PDZD2O15018 2839 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms