RNA–Protein interactions for RNA: ENST00000364700.1

RNU4-56P-201, Transcript of RNA, U4 small nuclear 56, pseudogene, humanhuman

BASIC

Gene RNU4-56P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-56P-201ENST00000364700 TIAM2Q8IVF5 1701 aa-0.84□□□□□ -2.54
RNU4-56P-201ENST00000364700 SMG1Q96Q15 3661 aaKnown RBP-0.84□□□□□ -2.54
RNU4-56P-201ENST00000364700 DNAH8Q96JB1 4490 aa-0.84□□□□□ -2.54
RNU4-56P-201ENST00000364700 DMXL2Q8TDJ6 3036 aa-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 MYO3AQ8NEV4 1616 aa-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 RGPD4Q7Z3J3 1758 aa-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 H0YAA0 97 aa-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 CEP290O15078 2479 aa-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 TROQ12816 1431 aaPredicted RBP-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 CDKN2A-AS1Q9UH64 79 aa-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 AP4S1Q9Y587 144 aa-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 RGPD3A6NKT7 1758 aaPredicted RBP-0.85□□□□□ -2.55
RNU4-56P-201ENST00000364700 POLR1AO95602 1720 aaPredicted RBP-0.86□□□□□ -2.55
RNU4-56P-201ENST00000364700 D6R8Y8 96 aa-0.86□□□□□ -2.55
RNU4-56P-201ENST00000364700 FAUP35544 74 aaKnown RBP-0.86□□□□□ -2.55
RNU4-56P-201ENST00000364700 MUSTN1Q8IVN3 82 aa-0.86□□□□□ -2.55
RNU4-56P-201ENST00000364700 ZFHX4Q86UP3 3567 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 K7EP34 96 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 LEPROTL1O95214 131 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 DEFB1P60022 68 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 COL5A1-AS1Q5SY13 56 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 SNHG12Q9BXW3 62 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 TRIOO75962 3097 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 C5orf42Q9H799 3197 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 ATP10BO94823 1461 aa-0.87□□□□□ -2.55
RNU4-56P-201ENST00000364700 TLN1Q9Y490 2541 aaKnown RBP-0.88□□□□□ -2.55
RNU4-56P-201ENST00000364700 TMEM131LA2VDJ0 1609 aa-0.88□□□□□ -2.55
RNU4-56P-201ENST00000364700 UQCRHLA0A096LP55 91 aa-0.88□□□□□ -2.55
RNU4-56P-201ENST00000364700 MT1GP13640 62 aa-0.88□□□□□ -2.55
RNU4-56P-201ENST00000364700 COX7BP24311 80 aa-0.88□□□□□ -2.55
RNU4-56P-201ENST00000364700 HEPN1Q6WQI6 88 aa-0.88□□□□□ -2.55
RNU4-56P-201ENST00000364700 ZNF720Q7Z2F6 126 aa-0.88□□□□□ -2.55
RNU4-56P-201ENST00000364700 ZNF831Q5JPB2 1677 aa-0.88□□□□□ -2.55
RNU4-56P-201ENST00000364700 NEXMIFQ5QGS0 1516 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 ADGRG4Q8IZF6 3080 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 M0R143 59 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 MT1LQ93083 61 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 C20orf78Q9BR46 151 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 ATP7BP35670 1465 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 LTN1O94822 1766 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 CSMD1Q96PZ7 3565 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 DOT1LQ8TEK3 1739 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 LRRC7Q96NW7 1537 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 CEP162Q5TB80 1403 aa-0.89□□□□□ -2.55
RNU4-56P-201ENST00000364700 SPENQ96T58 3664 aaKnown RBP-0.9□□□□□ -2.55
RNU4-56P-201ENST00000364700 RANBP2P49792 3224 aaKnown RBP-0.9□□□□□ -2.55
RNU4-56P-201ENST00000364700 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.9□□□□□ -2.55
RNU4-56P-201ENST00000364700 BOD1L1Q8NFC6 3051 aa-0.9□□□□□ -2.55
RNU4-56P-201ENST00000364700 H3BNG1 76 aa-0.9□□□□□ -2.55
RNU4-56P-201ENST00000364700 MT1EP04732 61 aa-0.9□□□□□ -2.55
RNU4-56P-201ENST00000364700 USP32Q8NFA0 1604 aa-0.9□□□□□ -2.55
RNU4-56P-201ENST00000364700 SCN11AQ9UI33 1791 aa-0.91□□□□□ -2.55
RNU4-56P-201ENST00000364700 DNAH10Q8IVF4 4471 aa-0.91□□□□□ -2.55
RNU4-56P-201ENST00000364700 H0YGG7 62 aa-0.91□□□□□ -2.56
RNU4-56P-201ENST00000364700 HMGN2P05204 90 aaKnown RBP-0.91□□□□□ -2.56
RNU4-56P-201ENST00000364700 NMSQ5H8A3 153 aa-0.91□□□□□ -2.56
RNU4-56P-201ENST00000364700 COX6B2Q6YFQ2 88 aa-0.91□□□□□ -2.56
RNU4-56P-201ENST00000364700 ATMQ13315 3056 aa-0.91□□□□□ -2.56
RNU4-56P-201ENST00000364700 TLN2Q9Y4G6 2542 aa-0.91□□□□□ -2.56
RNU4-56P-201ENST00000364700 LRBAP50851 2863 aa-0.92□□□□□ -2.56
RNU4-56P-201ENST00000364700 NDUFA3O95167 84 aa-0.92□□□□□ -2.56
RNU4-56P-201ENST00000364700 SMR3BP02814 79 aaPredicted RBP-0.92□□□□□ -2.56
RNU4-56P-201ENST00000364700 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.92□□□□□ -2.56
RNU4-56P-201ENST00000364700 LRRC9Q6ZRR7 1453 aa-0.92□□□□□ -2.56
RNU4-56P-201ENST00000364700 WIZO95785 1651 aa-0.93□□□□□ -2.56
RNU4-56P-201ENST00000364700 MT1FP04733 61 aa-0.93□□□□□ -2.56
RNU4-56P-201ENST00000364700 KRTAP8-1Q8IUC2 63 aa-0.93□□□□□ -2.56
RNU4-56P-201ENST00000364700 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.94□□□□□ -2.56
RNU4-56P-201ENST00000364700 C9orf92A6NGG3 77 aa-0.94□□□□□ -2.56
RNU4-56P-201ENST00000364700 CENPEQ02224 2701 aa-0.94□□□□□ -2.56
RNU4-56P-201ENST00000364700 TRRAPQ9Y4A5 3859 aa-0.94□□□□□ -2.56
RNU4-56P-201ENST00000364700 PRUNE2Q8WUY3 3088 aa-0.94□□□□□ -2.56
RNU4-56P-201ENST00000364700 NESP48681 1621 aa-0.94□□□□□ -2.56
RNU4-56P-201ENST00000364700 GYPAP02724 150 aa-0.95□□□□□ -2.56
RNU4-56P-201ENST00000364700 KRTAP19-5Q3LI72 72 aa-0.95□□□□□ -2.56
RNU4-56P-201ENST00000364700 BPTFQ12830 3046 aa-0.95□□□□□ -2.56
RNU4-56P-201ENST00000364700 PLXNC1O60486 1568 aa-0.96□□□□□ -2.56
RNU4-56P-201ENST00000364700 PPLO60437 1756 aa-0.96□□□□□ -2.56
RNU4-56P-201ENST00000364700 ANKRD50Q9ULJ7 1429 aa-0.96□□□□□ -2.56
RNU4-56P-201ENST00000364700 PKIAP61925 76 aa-0.96□□□□□ -2.56
RNU4-56P-201ENST00000364700 MAP3K1Q13233 1512 aa-0.96□□□□□ -2.56
RNU4-56P-201ENST00000364700 CSMD2Q7Z408 3487 aa-0.96□□□□□ -2.56
RNU4-56P-201ENST00000364700 SPTAN1Q13813 2472 aaKnown RBP-0.97□□□□□ -2.56
RNU4-56P-201ENST00000364700 A0A1B0GUT8 65 aa-0.97□□□□□ -2.56
RNU4-56P-201ENST00000364700 IQCF6A8MYZ5 107 aa-0.97□□□□□ -2.56
RNU4-56P-201ENST00000364700 S100A8P05109 93 aa-0.97□□□□□ -2.56
RNU4-56P-201ENST00000364700 NWD1Q149M9 1564 aa-0.97□□□□□ -2.56
RNU4-56P-201ENST00000364700 TRAV21A0A0B4J279 112 aa-0.98□□□□□ -2.57
RNU4-56P-201ENST00000364700 PLGLAQ15195 96 aa-0.98□□□□□ -2.57
RNU4-56P-201ENST00000364700 GAFA1Q96PS6 74 aa-0.98□□□□□ -2.57
RNU4-56P-201ENST00000364700 SPTBN5Q9NRC6 3674 aaKnown RBP-0.98□□□□□ -2.57
RNU4-56P-201ENST00000364700 FREM2Q5SZK8 3169 aa-0.98□□□□□ -2.57
RNU4-56P-201ENST00000364700 CDC42BPGQ6DT37 1551 aa-0.99□□□□□ -2.57
RNU4-56P-201ENST00000364700 ARFGEF2Q9Y6D5 1785 aa-0.99□□□□□ -2.57
RNU4-56P-201ENST00000364700 S4R3F8 94 aa-1□□□□□ -2.57
RNU4-56P-201ENST00000364700 MYMXA0A1B0GTQ4 84 aa-1.01□□□□□ -2.57
RNU4-56P-201ENST00000364700 PEA15Q15121 130 aa-1.01□□□□□ -2.57
RNU4-56P-201ENST00000364700 SMIM11AP58511 58 aa-1.02□□□□□ -2.57
RNU4-56P-201ENST00000364700 PYY3Q5JQD4 70 aa-1.02□□□□□ -2.57
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms