RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 KRTAP4-5Q9BYR2 181 aa2.69□□□□□ -1.98
PTPN22-201ENST00000359785 WDFY4Q6ZS81 3184 aa2.68□□□□□ -1.98
PTPN22-201ENST00000359785 MRPL34Q9BQ48 92 aaKnown RBP2.68□□□□□ -1.98
PTPN22-201ENST00000359785 PSPHP1O15172 72 aa2.68□□□□□ -1.98
PTPN22-201ENST00000359785 ZNF469Q96JG9 3925 aaPredicted RBP2.68□□□□□ -1.98
PTPN22-201ENST00000359785 FAM168BA1KXE4 195 aa2.67□□□□□ -1.98
PTPN22-201ENST00000359785 KRTAP16-1A8MUX0 517 aa2.67□□□□□ -1.98
PTPN22-201ENST00000359785 LORP23490 312 aaPredicted RBP2.67□□□□□ -1.98
PTPN22-201ENST00000359785 A8MU10 97 aa2.67□□□□□ -1.98
PTPN22-201ENST00000359785 ACYP2P14621 99 aa2.67□□□□□ -1.98
PTPN22-201ENST00000359785 KHDC1LQ5JSQ8 128 aa2.67□□□□□ -1.98
PTPN22-201ENST00000359785 WFDC10BQ8IUB3 73 aa2.67□□□□□ -1.98
PTPN22-201ENST00000359785 ZNF706Q9Y5V0 76 aaPredicted RBP2.67□□□□□ -1.98
PTPN22-201ENST00000359785 ICE1Q9Y2F5 2266 aa2.67□□□□□ -1.98
PTPN22-201ENST00000359785 SPINK7P58062 85 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 LINC00313P59037 77 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 KRTAP10-11P60412 298 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 FBN2P35556 2912 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 PRRC2CQ9Y520 2896 aaKnown RBP2.66□□□□□ -1.98
PTPN22-201ENST00000359785 RETNLBQ9BQ08 111 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 IGHV6-1A0A0B4J1U7 121 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 IGKV2-30P06310 120 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 SMR3AQ99954 134 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 SPTBN4Q9H254 2564 aa2.66□□□□□ -1.98
PTPN22-201ENST00000359785 WWC2-AS2Q96NR7 200 aa2.65□□□□□ -1.98
PTPN22-201ENST00000359785 CSMD1Q96PZ7 3565 aa2.65□□□□□ -1.98
PTPN22-201ENST00000359785 IGLV7-43P04211 117 aa2.65□□□□□ -1.99
PTPN22-201ENST00000359785 FAM208BQ5VWN6 2430 aa2.65□□□□□ -1.99
PTPN22-201ENST00000359785 LOC400499M0QZD8 3231 aa2.65□□□□□ -1.99
PTPN22-201ENST00000359785 ZNF861PO60384 105 aa2.65□□□□□ -1.99
PTPN22-201ENST00000359785 PKDREJQ9NTG1 2253 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 CEP295Q9C0D2 2601 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 USP9XQ93008 2570 aaPredicted RBP2.64□□□□□ -1.99
PTPN22-201ENST00000359785 A6NED7 52 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 DEFB130BP0DP73 79 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 DEFB130AP0DP74 79 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 NUPR2A6NF83 97 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 APCP25054 2843 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 FAT2Q9NYQ8 4349 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 MGAQ8IWI9 3026 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 ASPMQ8IZT6 3477 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 A8MUU9 505 aa2.64□□□□□ -1.99
PTPN22-201ENST00000359785 ABCA1O95477 2261 aa2.63□□□□□ -1.99
PTPN22-201ENST00000359785 CHD6Q8TD26 2715 aa2.63□□□□□ -1.99
PTPN22-201ENST00000359785 LRBAP50851 2863 aa2.63□□□□□ -1.99
PTPN22-201ENST00000359785 BOD1L1Q8NFC6 3051 aa2.63□□□□□ -1.99
PTPN22-201ENST00000359785 IGKV2D-30A0A075B6S6 120 aa2.63□□□□□ -1.99
PTPN22-201ENST00000359785 SPACA4Q8TDM5 124 aa2.63□□□□□ -1.99
PTPN22-201ENST00000359785 Q6ZRN7 208 aaPredicted RBP2.63□□□□□ -1.99
PTPN22-201ENST00000359785 RETNQ9HD89 108 aa2.63□□□□□ -1.99
PTPN22-201ENST00000359785 NCOR2Q9Y618 2525 aa2.62□□□□□ -1.99
PTPN22-201ENST00000359785 TENM4Q6N022 2769 aa2.62□□□□□ -1.99
PTPN22-201ENST00000359785 LRCOL1A6NCL2 159 aa2.62□□□□□ -1.99
PTPN22-201ENST00000359785 K7EIL1 84 aa2.62□□□□□ -1.99
PTPN22-201ENST00000359785 ZNF462Q96JM2 2506 aa2.62□□□□□ -1.99
PTPN22-201ENST00000359785 ACACBO00763 2458 aa2.61□□□□□ -1.99
PTPN22-201ENST00000359785 ITPR3Q14573 2671 aa2.61□□□□□ -1.99
PTPN22-201ENST00000359785 LY6G6CO95867 125 aa2.61□□□□□ -1.99
PTPN22-201ENST00000359785 UQCR11O14957 56 aa2.61□□□□□ -1.99
PTPN22-201ENST00000359785 UTP20O75691 2785 aaKnown RBP2.61□□□□□ -1.99
PTPN22-201ENST00000359785 HSPG2P98160 4391 aa2.61□□□□□ -1.99
PTPN22-201ENST00000359785 SETXQ7Z333 2677 aaKnown RBP2.61□□□□□ -1.99
PTPN22-201ENST00000359785 C11orf45Q8TAV5 145 aa2.61□□□□□ -1.99
PTPN22-201ENST00000359785 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
PTPN22-201ENST00000359785 TACC2O95359 2948 aa2.6□□□□□ -1.99
PTPN22-201ENST00000359785 SSBP3-AS1Q7Z2R9 100 aa2.6□□□□□ -1.99
PTPN22-201ENST00000359785 SPTA1P02549 2419 aa2.6□□□□□ -1.99
PTPN22-201ENST00000359785 VPS13BQ7Z7G8 4022 aa2.6□□□□□ -1.99
PTPN22-201ENST00000359785 USP9YO00507 2555 aaPredicted RBP2.6□□□□□ -1.99
PTPN22-201ENST00000359785 A0A096LNI7 61 aa2.6□□□□□ -1.99
PTPN22-201ENST00000359785 APLNQ9ULZ1 77 aa2.6□□□□□ -1.99
PTPN22-201ENST00000359785 ASH1LQ9NR48 2969 aaKnown RBP2.6□□□□□ -1.99
PTPN22-201ENST00000359785 A0A1W2PNN7 141 aa2.6□□□□□ -1.99
PTPN22-201ENST00000359785 COX6B2Q6YFQ2 88 aa2.6□□□□□ -1.99
PTPN22-201ENST00000359785 AKAP6Q13023 2319 aa2.59□□□□□ -1.99
PTPN22-201ENST00000359785 NOTCH3Q9UM47 2321 aa2.59□□□□□ -1.99
PTPN22-201ENST00000359785 DEFB135Q30KP9 77 aa2.59□□□□□ -1.99
PTPN22-201ENST00000359785 Q5W150 140 aa2.59□□□□□ -1.99
PTPN22-201ENST00000359785 ADGRG4Q8IZF6 3080 aa2.59□□□□□ -1.99
PTPN22-201ENST00000359785 MAP1AP78559 2803 aaPredicted RBP2.59□□□□□ -1.99
PTPN22-201ENST00000359785 DNAH11Q96DT5 4516 aa2.59□□□□□ -1.99
PTPN22-201ENST00000359785 MUC3AQ02505 3323 aa2.59□□□□□ -1.99
PTPN22-201ENST00000359785 KRTAP11-1Q8IUC1 163 aa2.59□□□□□ -2
PTPN22-201ENST00000359785 TNXBP22105 4242 aa2.58□□□□□ -2
PTPN22-201ENST00000359785 ATRXP46100 2492 aa2.58□□□□□ -2
PTPN22-201ENST00000359785 KRTAP25-1Q3LHN0 102 aa2.58□□□□□ -2
PTPN22-201ENST00000359785 WFDC13Q8IUB5 93 aa2.58□□□□□ -2
PTPN22-201ENST00000359785 SPTBN1Q01082 2364 aaKnown RBP2.58□□□□□ -2
PTPN22-201ENST00000359785 LAMA5O15230 3695 aa2.58□□□□□ -2
PTPN22-201ENST00000359785 IGLV5-52A0A0A0MRZ9 124 aa2.57□□□□□ -2
PTPN22-201ENST00000359785 CHD8Q9HCK8 2581 aa2.57□□□□□ -2
PTPN22-201ENST00000359785 UNC79Q9P2D8 2635 aa2.57□□□□□ -2
PTPN22-201ENST00000359785 PKD1P98161 4303 aa2.57□□□□□ -2
PTPN22-201ENST00000359785 MIR22HGQ0VDD5 57 aa2.57□□□□□ -2
PTPN22-201ENST00000359785 NAV2Q8IVL1 2488 aa2.57□□□□□ -2
PTPN22-201ENST00000359785 WNK2Q9Y3S1 2297 aa2.56□□□□□ -2
PTPN22-201ENST00000359785 MXRA5Q9NR99 2828 aa2.56□□□□□ -2
PTPN22-201ENST00000359785 PLECQ15149 4684 aaKnown RBP2.56□□□□□ -2
PTPN22-201ENST00000359785 SPAG11AQ6PDA7 123 aa2.55□□□□□ -2
PTPN22-201ENST00000359785 FLNCQ14315 2725 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms