RNA–Protein interactions for RNA: ENST00000349703.6

RFC1-201, Transcript of replication factor C subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RFC1, Length 4,859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-201ENST00000349703 MMP24-AS1A0A0U1RRL7 71 aa3.54□□□□□ -1.84
RFC1-201ENST00000349703 NBEAQ8NFP9 2946 aa3.53□□□□□ -1.84
RFC1-201ENST00000349703 KRTAP4-16G5E9R7 235 aaPredicted RBP3.53□□□□□ -1.84
RFC1-201ENST00000349703 Q6ZSA8 131 aa3.53□□□□□ -1.84
RFC1-201ENST00000349703 SPINK6Q6UWN8 80 aa3.53□□□□□ -1.85
RFC1-201ENST00000349703 KRTAP26-1Q6PEX3 210 aa3.52□□□□□ -1.85
RFC1-201ENST00000349703 CFAP54Q96N23 3096 aa3.52□□□□□ -1.85
RFC1-201ENST00000349703 LINC00472Q9H8W2 130 aa3.52□□□□□ -1.85
RFC1-201ENST00000349703 CSMD1Q96PZ7 3565 aa3.52□□□□□ -1.85
RFC1-201ENST00000349703 SPRR1BP22528 89 aa3.52□□□□□ -1.85
RFC1-201ENST00000349703 LAMA1P25391 3075 aa3.51□□□□□ -1.85
RFC1-201ENST00000349703 COL6A3P12111 3177 aa3.51□□□□□ -1.85
RFC1-201ENST00000349703 TTC28Q96AY4 2481 aa3.49□□□□□ -1.85
RFC1-201ENST00000349703 TRIOO75962 3097 aa3.49□□□□□ -1.85
RFC1-201ENST00000349703 J3QKU1 62 aa3.49□□□□□ -1.85
RFC1-201ENST00000349703 MYO9AB2RTY4 2548 aa3.49□□□□□ -1.85
RFC1-201ENST00000349703 LY6G6CO95867 125 aa3.48□□□□□ -1.85
RFC1-201ENST00000349703 ZZEF1O43149 2961 aa3.48□□□□□ -1.85
RFC1-201ENST00000349703 DSPP15924 2871 aaKnown RBP3.48□□□□□ -1.85
RFC1-201ENST00000349703 NAV2Q8IVL1 2488 aa3.47□□□□□ -1.85
RFC1-201ENST00000349703 ZNF462Q96JM2 2506 aa3.47□□□□□ -1.85
RFC1-201ENST00000349703 NBPF19A0A087WUL8 3843 aa3.47□□□□□ -1.85
RFC1-201ENST00000349703 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
RFC1-201ENST00000349703 TLN2Q9Y4G6 2542 aa3.47□□□□□ -1.85
RFC1-201ENST00000349703 IGF2RP11717 2491 aa3.46□□□□□ -1.86
RFC1-201ENST00000349703 MUC6Q6W4X9 2439 aa3.46□□□□□ -1.86
RFC1-201ENST00000349703 FN1P02751 2386 aaKnown RBP3.45□□□□□ -1.86
RFC1-201ENST00000349703 KRTAP10-3P60369 221 aa3.45□□□□□ -1.86
RFC1-201ENST00000349703 CR1P17927 2039 aa3.45□□□□□ -1.86
RFC1-201ENST00000349703 ACACBO00763 2458 aa3.45□□□□□ -1.86
RFC1-201ENST00000349703 SPATA8Q6RVD6 105 aa3.45□□□□□ -1.86
RFC1-201ENST00000349703 KRTAP1-3Q8IUG1 177 aa3.45□□□□□ -1.86
RFC1-201ENST00000349703 BDP1A6H8Y1 2624 aa3.44□□□□□ -1.86
RFC1-201ENST00000349703 PLAC8Q9NZF1 115 aa3.44□□□□□ -1.86
RFC1-201ENST00000349703 FRYQ5TBA9 3013 aa3.44□□□□□ -1.86
RFC1-201ENST00000349703 FAM208BQ5VWN6 2430 aa3.44□□□□□ -1.86
RFC1-201ENST00000349703 PRUNE2Q8WUY3 3088 aa3.44□□□□□ -1.86
RFC1-201ENST00000349703 ANKRD17O75179 2603 aaKnown RBP3.43□□□□□ -1.86
RFC1-201ENST00000349703 DOPEY1Q5JWR5 2465 aa3.43□□□□□ -1.86
RFC1-201ENST00000349703 CEP295Q9C0D2 2601 aa3.43□□□□□ -1.86
RFC1-201ENST00000349703 HIVEP2P31629 2446 aa3.43□□□□□ -1.86
RFC1-201ENST00000349703 USP9XQ93008 2570 aaPredicted RBP3.43□□□□□ -1.86
RFC1-201ENST00000349703 CSMD2Q7Z408 3487 aa3.42□□□□□ -1.86
RFC1-201ENST00000349703 VPS13AQ96RL7 3174 aa3.42□□□□□ -1.86
RFC1-201ENST00000349703 PTPN13Q12923 2485 aa3.42□□□□□ -1.86
RFC1-201ENST00000349703 PANO1I0J062 215 aa3.41□□□□□ -1.86
RFC1-201ENST00000349703 PRO2289Q9P1D8 64 aa3.41□□□□□ -1.86
RFC1-201ENST00000349703 FRYLO94915 3013 aa3.41□□□□□ -1.86
RFC1-201ENST00000349703 P0C880 135 aa3.41□□□□□ -1.86
RFC1-201ENST00000349703 USP9YO00507 2555 aaPredicted RBP3.41□□□□□ -1.86
RFC1-201ENST00000349703 TNRC18O15417 2968 aaPredicted RBP3.4□□□□□ -1.86
RFC1-201ENST00000349703 JMJD1CQ15652 2540 aa3.4□□□□□ -1.87
RFC1-201ENST00000349703 SVEP1Q4LDE5 3571 aa3.4□□□□□ -1.87
RFC1-201ENST00000349703 KRTAP1-1Q07627 177 aa3.4□□□□□ -1.87
RFC1-201ENST00000349703 SMR3AQ99954 134 aa3.39□□□□□ -1.87
RFC1-201ENST00000349703 KRTAP7-1Q8IUC3 87 aa3.37□□□□□ -1.87
RFC1-201ENST00000349703 SONP18583 2426 aaKnown RBP3.37□□□□□ -1.87
RFC1-201ENST00000349703 LAMA5O15230 3695 aa3.37□□□□□ -1.87
RFC1-201ENST00000349703 KRTAP10-11P60412 298 aa3.37□□□□□ -1.87
RFC1-201ENST00000349703 FREM2Q5SZK8 3169 aa3.36□□□□□ -1.87
RFC1-201ENST00000349703 NBDYA0A0U1RRE5 68 aa3.36□□□□□ -1.87
RFC1-201ENST00000349703 CELSR3Q9NYQ7 3312 aa3.36□□□□□ -1.87
RFC1-201ENST00000349703 KALRNO60229 2985 aa3.35□□□□□ -1.87
RFC1-201ENST00000349703 Q96NJ1 140 aa3.35□□□□□ -1.87
RFC1-201ENST00000349703 MGAQ8IWI9 3026 aa3.35□□□□□ -1.87
RFC1-201ENST00000349703 LOC400499M0QZD8 3231 aa3.34□□□□□ -1.87
RFC1-201ENST00000349703 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
RFC1-201ENST00000349703 INE1O15225 51 aa3.34□□□□□ -1.87
RFC1-201ENST00000349703 TACC2O95359 2948 aa3.33□□□□□ -1.88
RFC1-201ENST00000349703 CCDC168Q8NDH2 2452 aa3.33□□□□□ -1.88
RFC1-201ENST00000349703 ABCA12Q86UK0 2595 aa3.32□□□□□ -1.88
RFC1-201ENST00000349703 SPACA4Q8TDM5 124 aa3.32□□□□□ -1.88
RFC1-201ENST00000349703 CACNA1AO00555 2505 aa3.32□□□□□ -1.88
RFC1-201ENST00000349703 AKAP13Q12802 2813 aa3.32□□□□□ -1.88
RFC1-201ENST00000349703 LRBAP50851 2863 aa3.32□□□□□ -1.88
RFC1-201ENST00000349703 LRRK2Q5S007 2527 aa3.31□□□□□ -1.88
RFC1-201ENST00000349703 ADGRG4Q8IZF6 3080 aa3.31□□□□□ -1.88
RFC1-201ENST00000349703 HRNRQ86YZ3 2850 aaPredicted RBP3.31□□□□□ -1.88
RFC1-201ENST00000349703 NOTCH2Q04721 2471 aa3.31□□□□□ -1.88
RFC1-201ENST00000349703 ZFYVE26Q68DK2 2539 aa3.31□□□□□ -1.88
RFC1-201ENST00000349703 ZNF292O60281 2723 aa3.31□□□□□ -1.88
RFC1-201ENST00000349703 NCOR2Q9Y618 2525 aa3.31□□□□□ -1.88
RFC1-201ENST00000349703 PKD1L2Q7Z442 2459 aa3.3□□□□□ -1.88
RFC1-201ENST00000349703 SETD2Q9BYW2 2564 aaPredicted RBP3.3□□□□□ -1.88
RFC1-201ENST00000349703 K7EIL1 84 aa3.3□□□□□ -1.88
RFC1-201ENST00000349703 MYO18BQ8IUG5 2567 aa3.3□□□□□ -1.88
RFC1-201ENST00000349703 POLQO75417 2590 aa3.3□□□□□ -1.88
RFC1-201ENST00000349703 CHD8Q9HCK8 2581 aa3.3□□□□□ -1.88
RFC1-201ENST00000349703 KRTAP13-1Q8IUC0 172 aa3.3□□□□□ -1.88
RFC1-201ENST00000349703 EPG5Q9HCE0 2579 aa3.29□□□□□ -1.88
RFC1-201ENST00000349703 CHD6Q8TD26 2715 aa3.29□□□□□ -1.88
RFC1-201ENST00000349703 A0A0D9SG42 100 aa3.29□□□□□ -1.88
RFC1-201ENST00000349703 WDFY4Q6ZS81 3184 aa3.29□□□□□ -1.88
RFC1-201ENST00000349703 MAP1AP78559 2803 aaPredicted RBP3.28□□□□□ -1.88
RFC1-201ENST00000349703 A0A087WTM6 91 aa3.28□□□□□ -1.88
RFC1-201ENST00000349703 DMXL2Q8TDJ6 3036 aa3.27□□□□□ -1.89
RFC1-201ENST00000349703 CUBNO60494 3623 aa3.26□□□□□ -1.89
RFC1-201ENST00000349703 AKAP9Q99996 3911 aa3.26□□□□□ -1.89
RFC1-201ENST00000349703 CFAP47Q6ZTR5 3102 aa3.25□□□□□ -1.89
RFC1-201ENST00000349703 BOD1L1Q8NFC6 3051 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms