RNA–Protein interactions for RNA: ENST00000345990.8

CSNK1G3-201, Transcript of casein kinase 1 gamma 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSNK1G3, Length 4,635 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-201ENST00000345990 SEC61GP60059 68 aa8.55□□□□□ -1.04
CSNK1G3-201ENST00000345990 OBSCN-AS1Q96MR7 158 aa8.55□□□□□ -1.04
CSNK1G3-201ENST00000345990 Q6ZRN7 208 aaPredicted RBP8.55□□□□□ -1.04
CSNK1G3-201ENST00000345990 MXRA5Q9NR99 2828 aa8.55□□□□□ -1.04
CSNK1G3-201ENST00000345990 A0A087WVE0 104 aa8.54□□□□□ -1.04
CSNK1G3-201ENST00000345990 CFAP47Q6ZTR5 3102 aa8.54□□□□□ -1.04
CSNK1G3-201ENST00000345990 A8MWP4 228 aa8.53□□□□□ -1.04
CSNK1G3-201ENST00000345990 DEFB116Q30KQ4 102 aa8.53□□□□□ -1.04
CSNK1G3-201ENST00000345990 SPRR1BP22528 89 aa8.53□□□□□ -1.04
CSNK1G3-201ENST00000345990 NBEAL1Q6ZS30 2694 aa8.53□□□□□ -1.04
CSNK1G3-201ENST00000345990 SMR3BP02814 79 aaPredicted RBP8.53□□□□□ -1.04
CSNK1G3-201ENST00000345990 FAM30AQ9NZY2 134 aa8.53□□□□□ -1.04
CSNK1G3-201ENST00000345990 hDV103S1A0JD37 113 aa8.52□□□□□ -1.05
CSNK1G3-201ENST00000345990 MPLKIPQ8TAP9 179 aa8.51□□□□□ -1.05
CSNK1G3-201ENST00000345990 SPINK1P00995 79 aa8.51□□□□□ -1.05
CSNK1G3-201ENST00000345990 Q8NDZ9 215 aa8.51□□□□□ -1.05
CSNK1G3-201ENST00000345990 NF1P21359 2839 aa8.5□□□□□ -1.05
CSNK1G3-201ENST00000345990 LINC00313P59037 77 aa8.5□□□□□ -1.05
CSNK1G3-201ENST00000345990 H3BPC8 53 aa8.49□□□□□ -1.05
CSNK1G3-201ENST00000345990 FAM236DA0A1B0GTK5 79 aa8.48□□□□□ -1.05
CSNK1G3-201ENST00000345990 FAM236CP0DP71 79 aa8.48□□□□□ -1.05
CSNK1G3-201ENST00000345990 Q8N9L7 120 aa8.47□□□□□ -1.05
CSNK1G3-201ENST00000345990 LINC00208Q96KT6 92 aa8.47□□□□□ -1.05
CSNK1G3-201ENST00000345990 OTOGQ6ZRI0 2925 aa8.47□□□□□ -1.05
CSNK1G3-201ENST00000345990 J3QL48 77 aa8.47□□□□□ -1.05
CSNK1G3-201ENST00000345990 RELNP78509 3460 aa8.46□□□□□ -1.06
CSNK1G3-201ENST00000345990 H0Y9P7 68 aa8.46□□□□□ -1.06
CSNK1G3-201ENST00000345990 A0A1W2PNM2 257 aa8.45□□□□□ -1.06
CSNK1G3-201ENST00000345990 LAMA5O15230 3695 aa8.45□□□□□ -1.06
CSNK1G3-201ENST00000345990 IGLV8-61A0A075B6I0 122 aa8.45□□□□□ -1.06
CSNK1G3-201ENST00000345990 KRTAP10-1P60331 282 aa8.45□□□□□ -1.06
CSNK1G3-201ENST00000345990 KRTAP10-2P60368 255 aa8.44□□□□□ -1.06
CSNK1G3-201ENST00000345990 PRR15Q8IV56 129 aa8.44□□□□□ -1.06
CSNK1G3-201ENST00000345990 SMG1Q96Q15 3661 aaKnown RBP8.43□□□□□ -1.06
CSNK1G3-201ENST00000345990 SMIM29Q86T20 159 aa8.43□□□□□ -1.06
CSNK1G3-201ENST00000345990 TMEM254Q8TBM7 123 aa8.42□□□□□ -1.06
CSNK1G3-201ENST00000345990 SNURFQ9Y675 71 aa8.41□□□□□ -1.06
CSNK1G3-201ENST00000345990 STAB2Q8WWQ8 2551 aa8.41□□□□□ -1.06
CSNK1G3-201ENST00000345990 A0A1B0GVX0 72 aa8.41□□□□□ -1.06
CSNK1G3-201ENST00000345990 KRTAP4-16G5E9R7 235 aaPredicted RBP8.4□□□□□ -1.06
CSNK1G3-201ENST00000345990 MRPL34Q9BQ48 92 aaKnown RBP8.4□□□□□ -1.06
CSNK1G3-201ENST00000345990 ANAPC11Q9NYG5 84 aa8.39□□□□□ -1.07
CSNK1G3-201ENST00000345990 CCDC179H3BU77 68 aa8.38□□□□□ -1.07
CSNK1G3-201ENST00000345990 C8orf17Q9NRJ1 99 aa8.38□□□□□ -1.07
CSNK1G3-201ENST00000345990 K7EQZ3 153 aa8.37□□□□□ -1.07
CSNK1G3-201ENST00000345990 C1orf64Q8NEQ6 169 aa8.37□□□□□ -1.07
CSNK1G3-201ENST00000345990 TRAV22A0A0B4J277 110 aa8.36□□□□□ -1.07
CSNK1G3-201ENST00000345990 LINC00483Q53H64 154 aa8.35□□□□□ -1.07
CSNK1G3-201ENST00000345990 PMAIP1Q13794 54 aa8.35□□□□□ -1.07
CSNK1G3-201ENST00000345990 Q96NJ1 140 aa8.34□□□□□ -1.07
CSNK1G3-201ENST00000345990 LOC101927531A0A1B0GV80 90 aa8.33□□□□□ -1.08
CSNK1G3-201ENST00000345990 ATP11AUNQ6ZP68 121 aa8.32□□□□□ -1.08
CSNK1G3-201ENST00000345990 PANO1I0J062 215 aa8.31□□□□□ -1.08
CSNK1G3-201ENST00000345990 PRR4Q16378 134 aa8.31□□□□□ -1.08
CSNK1G3-201ENST00000345990 PRR26Q8N8Z3 221 aa8.29□□□□□ -1.08
CSNK1G3-201ENST00000345990 A0A0G2JQZ4 141 aa8.29□□□□□ -1.08
CSNK1G3-201ENST00000345990 VPS13CQ709C8 3753 aa8.29□□□□□ -1.08
CSNK1G3-201ENST00000345990 PRR15LQ9BU68 103 aa8.28□□□□□ -1.08
CSNK1G3-201ENST00000345990 IGKV2D-30A0A075B6S6 120 aa8.27□□□□□ -1.09
CSNK1G3-201ENST00000345990 IGKV2-30P06310 120 aa8.27□□□□□ -1.09
CSNK1G3-201ENST00000345990 Q5VSD8 79 aa8.27□□□□□ -1.09
CSNK1G3-201ENST00000345990 RETNLBQ9BQ08 111 aa8.26□□□□□ -1.09
CSNK1G3-201ENST00000345990 PCOTHQ58A44 107 aa8.25□□□□□ -1.09
CSNK1G3-201ENST00000345990 SERP1Q9Y6X1 66 aa8.25□□□□□ -1.09
CSNK1G3-201ENST00000345990 DSCR10P59022 87 aa8.25□□□□□ -1.09
CSNK1G3-201ENST00000345990 NBPF19A0A087WUL8 3843 aa8.24□□□□□ -1.09
CSNK1G3-201ENST00000345990 PRO0628Q9UI54 55 aa8.23□□□□□ -1.09
CSNK1G3-201ENST00000345990 A6NED7 52 aa8.22□□□□□ -1.09
CSNK1G3-201ENST00000345990 KRTAP7-1Q8IUC3 87 aa8.22□□□□□ -1.09
CSNK1G3-201ENST00000345990 SMIM26A0A096LP01 95 aa8.21□□□□□ -1.09
CSNK1G3-201ENST00000345990 ANK3Q12955 4377 aaKnown RBP8.21□□□□□ -1.09
CSNK1G3-201ENST00000345990 TENM1Q9UKZ4 2725 aa8.21□□□□□ -1.1
CSNK1G3-201ENST00000345990 ACYP2P14621 99 aa8.19□□□□□ -1.1
CSNK1G3-201ENST00000345990 Q6ZSA8 131 aa8.18□□□□□ -1.1
CSNK1G3-201ENST00000345990 KRTAP13-1Q8IUC0 172 aa8.18□□□□□ -1.1
CSNK1G3-201ENST00000345990 LINC00472Q9H8W2 130 aa8.17□□□□□ -1.1
CSNK1G3-201ENST00000345990 RPS29P62273 56 aaKnown RBP8.16□□□□□ -1.1
CSNK1G3-201ENST00000345990 IGLV7-46A0A075B6I9 117 aa8.15□□□□□ -1.1
CSNK1G3-201ENST00000345990 KLKP1Q107X0 134 aa8.14□□□□□ -1.11
CSNK1G3-201ENST00000345990 C7orf65Q6ZTY9 151 aa8.14□□□□□ -1.11
CSNK1G3-201ENST00000345990 C9orf92A6NGG3 77 aa8.12□□□□□ -1.11
CSNK1G3-201ENST00000345990 FP248Q71RG6 208 aaPredicted RBP8.12□□□□□ -1.11
CSNK1G3-201ENST00000345990 KRTAP11-1Q8IUC1 163 aa8.12□□□□□ -1.11
CSNK1G3-201ENST00000345990 ASB16-AS1Q495Z4 193 aa8.12□□□□□ -1.11
CSNK1G3-201ENST00000345990 TENM3Q9P273 2699 aa8.09□□□□□ -1.11
CSNK1G3-201ENST00000345990 C4orf26Q17RF5 130 aa8.08□□□□□ -1.12
CSNK1G3-201ENST00000345990 OXTP01178 125 aa8.07□□□□□ -1.12
CSNK1G3-201ENST00000345990 MMP24-AS1A0A0U1RRL7 71 aa8.07□□□□□ -1.12
CSNK1G3-201ENST00000345990 Q5XG85 94 aa8.07□□□□□ -1.12
CSNK1G3-201ENST00000345990 OCR1Q9BZK8 76 aa8.06□□□□□ -1.12
CSNK1G3-201ENST00000345990 PSPHP1O15172 72 aa8.06□□□□□ -1.12
CSNK1G3-201ENST00000345990 CELSR1Q9NYQ6 3014 aa8.05□□□□□ -1.12
CSNK1G3-201ENST00000345990 K7ERS5 55 aa8.05□□□□□ -1.12
CSNK1G3-201ENST00000345990 RPS28P62857 69 aaKnown RBP8.04□□□□□ -1.12
CSNK1G3-201ENST00000345990 A0A087X002 238 aa8.03□□□□□ -1.12
CSNK1G3-201ENST00000345990 SPANXA2-OT1Q8N9U9 137 aa8.03□□□□□ -1.12
CSNK1G3-201ENST00000345990 Q8N1X5 172 aa8.02□□□□□ -1.12
CSNK1G3-201ENST00000345990 AKAP9Q99996 3911 aa8.02□□□□□ -1.13
CSNK1G3-201ENST00000345990 FBN1P35555 2871 aaKnown RBP8.02□□□□□ -1.13
CSNK1G3-201ENST00000345990 RBM12B-AS1Q9P1G2 102 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms