RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 UNC80Q8N2C7 3258 aa8.01□□□□□ -1.13
DNMT1-201ENST00000340748 SPRR1AP35321 89 aa7.99□□□□□ -1.13
DNMT1-201ENST00000340748 CFAP54Q96N23 3096 aa7.98□□□□□ -1.13
DNMT1-201ENST00000340748 COL6A3P12111 3177 aa7.98□□□□□ -1.13
DNMT1-201ENST00000340748 M0R2T5 61 aa7.97□□□□□ -1.13
DNMT1-201ENST00000340748 XIRP2A4UGR9 3374 aa7.97□□□□□ -1.13
DNMT1-201ENST00000340748 TRIOO75962 3097 aa7.97□□□□□ -1.13
DNMT1-201ENST00000340748 KRTAP10-2P60368 255 aa7.96□□□□□ -1.13
DNMT1-201ENST00000340748 KRTAP10-1P60331 282 aa7.96□□□□□ -1.14
DNMT1-201ENST00000340748 FAM229BQ4G0N7 80 aa7.96□□□□□ -1.14
DNMT1-201ENST00000340748 Q8NDZ9 215 aa7.96□□□□□ -1.14
DNMT1-201ENST00000340748 NBEAL1Q6ZS30 2694 aa7.95□□□□□ -1.14
DNMT1-201ENST00000340748 PLAC8Q9NZF1 115 aa7.95□□□□□ -1.14
DNMT1-201ENST00000340748 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
DNMT1-201ENST00000340748 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
DNMT1-201ENST00000340748 LAMA2P24043 3122 aaKnown RBP7.93□□□□□ -1.14
DNMT1-201ENST00000340748 Q6ZSA8 131 aa7.93□□□□□ -1.14
DNMT1-201ENST00000340748 Q1T7F1 81 aa7.93□□□□□ -1.14
DNMT1-201ENST00000340748 KRTAP1-5Q9BYS1 174 aa7.92□□□□□ -1.14
DNMT1-201ENST00000340748 CDC42SE1Q9NRR8 79 aa7.91□□□□□ -1.14
DNMT1-201ENST00000340748 Q8N1X5 172 aa7.91□□□□□ -1.14
DNMT1-201ENST00000340748 SPRR1BP22528 89 aa7.91□□□□□ -1.14
DNMT1-201ENST00000340748 CRIPTQ9P021 101 aa7.9□□□□□ -1.14
DNMT1-201ENST00000340748 ITPR2Q14571 2701 aa7.89□□□□□ -1.15
DNMT1-201ENST00000340748 NOTCH1P46531 2555 aa7.89□□□□□ -1.15
DNMT1-201ENST00000340748 KTN1-AS1Q86SY8 53 aa7.89□□□□□ -1.15
DNMT1-201ENST00000340748 MMP24-AS1A0A0U1RRL7 71 aa7.88□□□□□ -1.15
DNMT1-201ENST00000340748 KRTAP26-1Q6PEX3 210 aa7.87□□□□□ -1.15
DNMT1-201ENST00000340748 Q6ZR54 194 aa7.86□□□□□ -1.15
DNMT1-201ENST00000340748 HIVEP1P15822 2718 aa7.86□□□□□ -1.15
DNMT1-201ENST00000340748 DNAH14Q0VDD8 3507 aa7.85□□□□□ -1.15
DNMT1-201ENST00000340748 HRES1P13985 223 aa7.84□□□□□ -1.15
DNMT1-201ENST00000340748 FLNCQ14315 2725 aa7.83□□□□□ -1.16
DNMT1-201ENST00000340748 LINC00472Q9H8W2 130 aa7.82□□□□□ -1.16
DNMT1-201ENST00000340748 LCA10Q71F78 164 aa7.82□□□□□ -1.16
DNMT1-201ENST00000340748 OXTP01178 125 aa7.8□□□□□ -1.16
DNMT1-201ENST00000340748 UBR5O95071 2799 aaPredicted RBP7.8□□□□□ -1.16
DNMT1-201ENST00000340748 Q75L30 129 aa7.79□□□□□ -1.16
DNMT1-201ENST00000340748 ZCCHC13Q8WW36 166 aaKnown RBP7.79□□□□□ -1.16
DNMT1-201ENST00000340748 FRYLO94915 3013 aa7.78□□□□□ -1.16
DNMT1-201ENST00000340748 REV3LO60673 3130 aa7.78□□□□□ -1.16
DNMT1-201ENST00000340748 FRYQ5TBA9 3013 aa7.77□□□□□ -1.16
DNMT1-201ENST00000340748 SEC61BP60468 96 aaKnown RBP7.77□□□□□ -1.17
DNMT1-201ENST00000340748 LINC01558Q9Y6Z2 57 aa7.76□□□□□ -1.17
DNMT1-201ENST00000340748 A0A0D9SG42 100 aa7.76□□□□□ -1.17
DNMT1-201ENST00000340748 MAP1AP78559 2803 aaPredicted RBP7.73□□□□□ -1.17
DNMT1-201ENST00000340748 EYSQ5T1H1 3165 aa7.73□□□□□ -1.17
DNMT1-201ENST00000340748 ITPR1Q14643 2758 aa7.72□□□□□ -1.17
DNMT1-201ENST00000340748 Q8N9P0 234 aaPredicted RBP7.72□□□□□ -1.17
DNMT1-201ENST00000340748 DMXL2Q8TDJ6 3036 aa7.72□□□□□ -1.17
DNMT1-201ENST00000340748 A0A1B0GU33 70 aa7.72□□□□□ -1.17
DNMT1-201ENST00000340748 LINC00483Q53H64 154 aa7.72□□□□□ -1.17
DNMT1-201ENST00000340748 Q5W150 140 aa7.72□□□□□ -1.17
DNMT1-201ENST00000340748 TENM4Q6N022 2769 aa7.72□□□□□ -1.17
DNMT1-201ENST00000340748 CYSTM1Q9H1C7 97 aa7.71□□□□□ -1.17
DNMT1-201ENST00000340748 LINC01554Q52M75 96 aa7.71□□□□□ -1.18
DNMT1-201ENST00000340748 Q5XG85 94 aa7.71□□□□□ -1.18
DNMT1-201ENST00000340748 USP34Q70CQ2 3546 aa7.7□□□□□ -1.18
DNMT1-201ENST00000340748 COL12A1Q99715 3063 aa7.7□□□□□ -1.18
DNMT1-201ENST00000340748 ATMQ13315 3056 aa7.7□□□□□ -1.18
DNMT1-201ENST00000340748 KRTAP4-16G5E9R7 235 aaPredicted RBP7.69□□□□□ -1.18
DNMT1-201ENST00000340748 VPS13AQ96RL7 3174 aa7.68□□□□□ -1.18
DNMT1-201ENST00000340748 FP248Q71RG6 208 aaPredicted RBP7.67□□□□□ -1.18
DNMT1-201ENST00000340748 VCANP13611 3396 aa7.65□□□□□ -1.18
DNMT1-201ENST00000340748 UTP20O75691 2785 aaKnown RBP7.65□□□□□ -1.19
DNMT1-201ENST00000340748 NSD1Q96L73 2696 aaPredicted RBP7.64□□□□□ -1.19
DNMT1-201ENST00000340748 SPTBN5Q9NRC6 3674 aaKnown RBP7.63□□□□□ -1.19
DNMT1-201ENST00000340748 APCP25054 2843 aa7.63□□□□□ -1.19
DNMT1-201ENST00000340748 STAB2Q8WWQ8 2551 aa7.63□□□□□ -1.19
DNMT1-201ENST00000340748 S4R3F8 94 aa7.62□□□□□ -1.19
DNMT1-201ENST00000340748 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
DNMT1-201ENST00000340748 TACC2O95359 2948 aa7.62□□□□□ -1.19
DNMT1-201ENST00000340748 CRYBG3Q68DQ2 2970 aa7.62□□□□□ -1.19
DNMT1-201ENST00000340748 Q5VV11 94 aa7.61□□□□□ -1.19
DNMT1-201ENST00000340748 CSAG1Q6PB30 78 aa7.6□□□□□ -1.19
DNMT1-201ENST00000340748 KMT2BQ9UMN6 2715 aaPredicted RBP7.6□□□□□ -1.19
DNMT1-201ENST00000340748 SPINK7P58062 85 aa7.6□□□□□ -1.19
DNMT1-201ENST00000340748 DMXL1Q9Y485 3027 aa7.58□□□□□ -1.2
DNMT1-201ENST00000340748 PANO1I0J062 215 aa7.58□□□□□ -1.2
DNMT1-201ENST00000340748 MYO15AQ9UKN7 3530 aa7.58□□□□□ -1.2
DNMT1-201ENST00000340748 SPEGQ15772 3267 aa7.57□□□□□ -1.2
DNMT1-201ENST00000340748 NBEAQ8NFP9 2946 aa7.56□□□□□ -1.2
DNMT1-201ENST00000340748 KRTAP29-1A8MX34 341 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-201ENST00000340748 Q6ZRN7 208 aaPredicted RBP7.56□□□□□ -1.2
DNMT1-201ENST00000340748 CAMK2N1Q7Z7J9 78 aa7.53□□□□□ -1.2
DNMT1-201ENST00000340748 LAMA1P25391 3075 aa7.53□□□□□ -1.2
DNMT1-201ENST00000340748 CELSR3Q9NYQ7 3312 aa7.51□□□□□ -1.21
DNMT1-201ENST00000340748 KALRNO60229 2985 aa7.49□□□□□ -1.21
DNMT1-201ENST00000340748 BOD1L1Q8NFC6 3051 aa7.49□□□□□ -1.21
DNMT1-201ENST00000340748 ASB16-AS1Q495Z4 193 aa7.47□□□□□ -1.21
DNMT1-201ENST00000340748 LUZP6Q538Z0 58 aa7.45□□□□□ -1.22
DNMT1-201ENST00000340748 NBEAL2Q6ZNJ1 2754 aa7.45□□□□□ -1.22
DNMT1-201ENST00000340748 A0A087X002 238 aa7.43□□□□□ -1.22
DNMT1-201ENST00000340748 RPS29P62273 56 aaKnown RBP7.42□□□□□ -1.22
DNMT1-201ENST00000340748 LRBAP50851 2863 aa7.42□□□□□ -1.22
DNMT1-201ENST00000340748 ASH1LQ9NR48 2969 aaKnown RBP7.41□□□□□ -1.22
DNMT1-201ENST00000340748 KRTAP7-1Q8IUC3 87 aa7.41□□□□□ -1.22
DNMT1-201ENST00000340748 KRTAP11-1Q8IUC1 163 aa7.41□□□□□ -1.22
DNMT1-201ENST00000340748 H1FX-AS1Q4G0G2 97 aa7.41□□□□□ -1.22
DNMT1-201ENST00000340748 R4GN34 69 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms