RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 SPATA8Q6RVD6 105 aa7.9□□□□□ -1.14
KPNA4-201ENST00000334256 LCE6AA0A183 80 aa7.89□□□□□ -1.15
KPNA4-201ENST00000334256 CRYBG3Q68DQ2 2970 aa7.86□□□□□ -1.15
KPNA4-201ENST00000334256 COX8CQ7Z4L0 72 aa7.86□□□□□ -1.15
KPNA4-201ENST00000334256 ZCCHC13Q8WW36 166 aaKnown RBP7.85□□□□□ -1.15
KPNA4-201ENST00000334256 LINC01546A6NGU7 62 aa7.85□□□□□ -1.15
KPNA4-201ENST00000334256 SETXQ7Z333 2677 aaKnown RBP7.84□□□□□ -1.15
KPNA4-201ENST00000334256 SPANXA2-OT1Q8N9U9 137 aa7.81□□□□□ -1.16
KPNA4-201ENST00000334256 P0C880 135 aa7.81□□□□□ -1.16
KPNA4-201ENST00000334256 PLAC8Q9NZF1 115 aa7.81□□□□□ -1.16
KPNA4-201ENST00000334256 FREM2Q5SZK8 3169 aa7.81□□□□□ -1.16
KPNA4-201ENST00000334256 ITPR3Q14573 2671 aa7.81□□□□□ -1.16
KPNA4-201ENST00000334256 LAMA2P24043 3122 aaKnown RBP7.79□□□□□ -1.16
KPNA4-201ENST00000334256 Q75L30 129 aa7.79□□□□□ -1.16
KPNA4-201ENST00000334256 A0A0C4DFX4 3053 aa7.78□□□□□ -1.16
KPNA4-201ENST00000334256 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
KPNA4-201ENST00000334256 Q8NDZ9 215 aa7.78□□□□□ -1.16
KPNA4-201ENST00000334256 CNBPP62633 177 aaKnown RBP7.78□□□□□ -1.16
KPNA4-201ENST00000334256 KRTAP10-1P60331 282 aa7.77□□□□□ -1.17
KPNA4-201ENST00000334256 STAB2Q8WWQ8 2551 aa7.76□□□□□ -1.17
KPNA4-201ENST00000334256 KRTAP10-2P60368 255 aa7.76□□□□□ -1.17
KPNA4-201ENST00000334256 DNAH12Q6ZR08 3092 aa7.75□□□□□ -1.17
KPNA4-201ENST00000334256 CELSR3Q9NYQ7 3312 aa7.75□□□□□ -1.17
KPNA4-201ENST00000334256 A0A1B0GVY2 172 aa7.74□□□□□ -1.17
KPNA4-201ENST00000334256 GIG44P09565 113 aaPredicted RBP7.74□□□□□ -1.17
KPNA4-201ENST00000334256 RPL37P61927 97 aaKnown RBP7.73□□□□□ -1.17
KPNA4-201ENST00000334256 NDUFAF8A1L188 74 aa7.72□□□□□ -1.17
KPNA4-201ENST00000334256 PRR34Q9NV39 138 aa7.71□□□□□ -1.17
KPNA4-201ENST00000334256 C10orf95Q9H7T3 257 aa7.71□□□□□ -1.18
KPNA4-201ENST00000334256 CFAP54Q96N23 3096 aa7.71□□□□□ -1.18
KPNA4-201ENST00000334256 TEX15Q9BXT5 2789 aa7.71□□□□□ -1.18
KPNA4-201ENST00000334256 Q5VV11 94 aa7.69□□□□□ -1.18
KPNA4-201ENST00000334256 Q5W150 140 aa7.67□□□□□ -1.18
KPNA4-201ENST00000334256 OCR1Q9BZK8 76 aa7.67□□□□□ -1.18
KPNA4-201ENST00000334256 KRTAP10-8P60410 259 aa7.66□□□□□ -1.18
KPNA4-201ENST00000334256 Q6ZR54 194 aa7.63□□□□□ -1.19
KPNA4-201ENST00000334256 NOTCH1P46531 2555 aa7.63□□□□□ -1.19
KPNA4-201ENST00000334256 SPRR1BP22528 89 aa7.62□□□□□ -1.19
KPNA4-201ENST00000334256 NBEAL1Q6ZS30 2694 aa7.61□□□□□ -1.19
KPNA4-201ENST00000334256 A8MUU9 505 aa7.61□□□□□ -1.19
KPNA4-201ENST00000334256 CYSTM1Q9H1C7 97 aa7.61□□□□□ -1.19
KPNA4-201ENST00000334256 Q5XG85 94 aa7.6□□□□□ -1.19
KPNA4-201ENST00000334256 A8MU10 97 aa7.59□□□□□ -1.19
KPNA4-201ENST00000334256 FRYQ5TBA9 3013 aa7.57□□□□□ -1.2
KPNA4-201ENST00000334256 MMP24-AS1A0A0U1RRL7 71 aa7.55□□□□□ -1.2
KPNA4-201ENST00000334256 HTTP42858 3142 aa7.55□□□□□ -1.2
KPNA4-201ENST00000334256 MKI67P46013 3256 aaKnown RBP7.55□□□□□ -1.2
KPNA4-201ENST00000334256 COL6A5A8TX70 2615 aa7.55□□□□□ -1.2
KPNA4-201ENST00000334256 LAMA3Q16787 3333 aa7.55□□□□□ -1.2
KPNA4-201ENST00000334256 KRTAP1-3Q8IUG1 177 aa7.53□□□□□ -1.2
KPNA4-201ENST00000334256 TRIOO75962 3097 aa7.53□□□□□ -1.2
KPNA4-201ENST00000334256 TEP1Q99973 2627 aaKnown RBP7.52□□□□□ -1.21
KPNA4-201ENST00000334256 VCANP13611 3396 aa7.52□□□□□ -1.21
KPNA4-201ENST00000334256 KMT2BQ9UMN6 2715 aaPredicted RBP7.52□□□□□ -1.21
KPNA4-201ENST00000334256 UNC80Q8N2C7 3258 aa7.52□□□□□ -1.21
KPNA4-201ENST00000334256 CENPEQ02224 2701 aa7.51□□□□□ -1.21
KPNA4-201ENST00000334256 CHD6Q8TD26 2715 aa7.5□□□□□ -1.21
KPNA4-201ENST00000334256 SPEGQ15772 3267 aa7.5□□□□□ -1.21
KPNA4-201ENST00000334256 UNC79Q9P2D8 2635 aa7.48□□□□□ -1.21
KPNA4-201ENST00000334256 BRCA2P51587 3418 aa7.48□□□□□ -1.21
KPNA4-201ENST00000334256 FLNAP21333 2647 aaKnown RBP7.47□□□□□ -1.21
KPNA4-201ENST00000334256 KRTAP1-1Q07627 177 aa7.46□□□□□ -1.21
KPNA4-201ENST00000334256 KRTAP10-10P60014 251 aa7.45□□□□□ -1.22
KPNA4-201ENST00000334256 TNP1P09430 55 aa7.44□□□□□ -1.22
KPNA4-201ENST00000334256 DNAH14Q0VDD8 3507 aa7.44□□□□□ -1.22
KPNA4-201ENST00000334256 A0A096LNT2 108 aa7.41□□□□□ -1.22
KPNA4-201ENST00000334256 KRTAP25-1Q3LHN0 102 aa7.39□□□□□ -1.23
KPNA4-201ENST00000334256 WDFY4Q6ZS81 3184 aa7.39□□□□□ -1.23
KPNA4-201ENST00000334256 A0A087X002 238 aa7.37□□□□□ -1.23
KPNA4-201ENST00000334256 RANBP2P49792 3224 aaKnown RBP7.37□□□□□ -1.23
KPNA4-201ENST00000334256 CFAP47Q6ZTR5 3102 aa7.37□□□□□ -1.23
KPNA4-201ENST00000334256 PRUNE2Q8WUY3 3088 aa7.37□□□□□ -1.23
KPNA4-201ENST00000334256 KRTAP1-5Q9BYS1 174 aa7.35□□□□□ -1.23
KPNA4-201ENST00000334256 PANO1I0J062 215 aa7.34□□□□□ -1.23
KPNA4-201ENST00000334256 TNRC18O15417 2968 aaPredicted RBP7.32□□□□□ -1.24
KPNA4-201ENST00000334256 NSD1Q96L73 2696 aaPredicted RBP7.29□□□□□ -1.24
KPNA4-201ENST00000334256 KRTAP26-1Q6PEX3 210 aa7.29□□□□□ -1.24
KPNA4-201ENST00000334256 LINC00472Q9H8W2 130 aa7.25□□□□□ -1.25
KPNA4-201ENST00000334256 CDH23Q9H251 3354 aa7.25□□□□□ -1.25
KPNA4-201ENST00000334256 VPS13AQ96RL7 3174 aa7.23□□□□□ -1.25
KPNA4-201ENST00000334256 PRO2289Q9P1D8 64 aa7.23□□□□□ -1.25
KPNA4-201ENST00000334256 IGSF10Q6WRI0 2623 aa7.23□□□□□ -1.25
KPNA4-201ENST00000334256 SZT2Q5T011 3432 aa7.22□□□□□ -1.25
KPNA4-201ENST00000334256 NOTCH2NLQ7Z3S9 236 aa7.2□□□□□ -1.26
KPNA4-201ENST00000334256 ASH1LQ9NR48 2969 aaKnown RBP7.17□□□□□ -1.26
KPNA4-201ENST00000334256 TRANK1O15050 2925 aa7.16□□□□□ -1.26
KPNA4-201ENST00000334256 LAMA1P25391 3075 aa7.16□□□□□ -1.26
KPNA4-201ENST00000334256 COL6A3P12111 3177 aa7.15□□□□□ -1.26
KPNA4-201ENST00000334256 MGAQ8IWI9 3026 aa7.14□□□□□ -1.27
KPNA4-201ENST00000334256 DMXL2Q8TDJ6 3036 aa7.13□□□□□ -1.27
KPNA4-201ENST00000334256 ITPR2Q14571 2701 aa7.11□□□□□ -1.27
KPNA4-201ENST00000334256 ASPMQ8IZT6 3477 aa7.08□□□□□ -1.28
KPNA4-201ENST00000334256 GCN1Q92616 2671 aaKnown RBP7.07□□□□□ -1.28
KPNA4-201ENST00000334256 ATMQ13315 3056 aa7.06□□□□□ -1.28
KPNA4-201ENST00000334256 KRTAP4-16G5E9R7 235 aaPredicted RBP7.06□□□□□ -1.28
KPNA4-201ENST00000334256 A6NN06 94 aa7.05□□□□□ -1.28
KPNA4-201ENST00000334256 ZFHX4Q86UP3 3567 aa7.05□□□□□ -1.28
KPNA4-201ENST00000334256 COL12A1Q99715 3063 aa7.03□□□□□ -1.28
KPNA4-201ENST00000334256 BOD1L1Q8NFC6 3051 aa7.01□□□□□ -1.29
KPNA4-201ENST00000334256 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms