RNA–Protein interactions for RNA: ENST00000310397.12

SNED1-201, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SNED1, Length 8,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-201ENST00000310397 UNC80Q8N2C7 3258 aa8.4□□□□□ -1.06
SNED1-201ENST00000310397 Q5XG85 94 aa8.4□□□□□ -1.06
SNED1-201ENST00000310397 A0A087WTM6 91 aa8.4□□□□□ -1.07
SNED1-201ENST00000310397 K7EIL1 84 aa8.39□□□□□ -1.07
SNED1-201ENST00000310397 STAB2Q8WWQ8 2551 aa8.39□□□□□ -1.07
SNED1-201ENST00000310397 CDH23Q9H251 3354 aa8.39□□□□□ -1.07
SNED1-201ENST00000310397 PSORS1C2Q9UIG4 136 aa8.38□□□□□ -1.07
SNED1-201ENST00000310397 ITPR1Q14643 2758 aa8.38□□□□□ -1.07
SNED1-201ENST00000310397 KRTAP10-3P60369 221 aa8.38□□□□□ -1.07
SNED1-201ENST00000310397 IGLV7-43P04211 117 aa8.38□□□□□ -1.07
SNED1-201ENST00000310397 ITPR2Q14571 2701 aa8.37□□□□□ -1.07
SNED1-201ENST00000310397 APCP25054 2843 aa8.36□□□□□ -1.07
SNED1-201ENST00000310397 DMBT1Q9UGM3 2413 aaPredicted RBP8.36□□□□□ -1.07
SNED1-201ENST00000310397 REV3LO60673 3130 aa8.34□□□□□ -1.07
SNED1-201ENST00000310397 FP248Q71RG6 208 aaPredicted RBP8.34□□□□□ -1.07
SNED1-201ENST00000310397 FRYLO94915 3013 aa8.33□□□□□ -1.08
SNED1-201ENST00000310397 WWC2-AS2Q96NR7 200 aa8.33□□□□□ -1.08
SNED1-201ENST00000310397 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
SNED1-201ENST00000310397 CASC10Q5T4H9 136 aa8.32□□□□□ -1.08
SNED1-201ENST00000310397 LUZP6Q538Z0 58 aa8.31□□□□□ -1.08
SNED1-201ENST00000310397 ANAPC11Q9NYG5 84 aa8.31□□□□□ -1.08
SNED1-201ENST00000310397 FAM229BQ4G0N7 80 aa8.31□□□□□ -1.08
SNED1-201ENST00000310397 PRR26Q8N8Z3 221 aa8.31□□□□□ -1.08
SNED1-201ENST00000310397 Q8N9P0 234 aaPredicted RBP8.31□□□□□ -1.08
SNED1-201ENST00000310397 VCANP13611 3396 aa8.3□□□□□ -1.08
SNED1-201ENST00000310397 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
SNED1-201ENST00000310397 LRBAP50851 2863 aa8.3□□□□□ -1.08
SNED1-201ENST00000310397 TACC2O95359 2948 aa8.29□□□□□ -1.08
SNED1-201ENST00000310397 SPRR1AP35321 89 aa8.27□□□□□ -1.08
SNED1-201ENST00000310397 UBR5O95071 2799 aaPredicted RBP8.27□□□□□ -1.09
SNED1-201ENST00000310397 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
SNED1-201ENST00000310397 RBM12B-AS1Q9P1G2 102 aa8.26□□□□□ -1.09
SNED1-201ENST00000310397 LINC01554Q52M75 96 aa8.26□□□□□ -1.09
SNED1-201ENST00000310397 C9orf92A6NGG3 77 aa8.24□□□□□ -1.09
SNED1-201ENST00000310397 Q8N1X5 172 aa8.23□□□□□ -1.09
SNED1-201ENST00000310397 Q8NDZ9 215 aa8.22□□□□□ -1.09
SNED1-201ENST00000310397 KRTAP1-1Q07627 177 aa8.22□□□□□ -1.09
SNED1-201ENST00000310397 ADGRG4Q8IZF6 3080 aa8.21□□□□□ -1.1
SNED1-201ENST00000310397 ASH1LQ9NR48 2969 aaKnown RBP8.21□□□□□ -1.1
SNED1-201ENST00000310397 MMP24-AS1A0A0U1RRL7 71 aa8.21□□□□□ -1.1
SNED1-201ENST00000310397 Q5VV11 94 aa8.21□□□□□ -1.1
SNED1-201ENST00000310397 HRES1P13985 223 aa8.21□□□□□ -1.1
SNED1-201ENST00000310397 BOD1L1Q8NFC6 3051 aa8.19□□□□□ -1.1
SNED1-201ENST00000310397 DMXL2Q8TDJ6 3036 aa8.19□□□□□ -1.1
SNED1-201ENST00000310397 A0A1B0GU33 70 aa8.18□□□□□ -1.1
SNED1-201ENST00000310397 UTP20O75691 2785 aaKnown RBP8.18□□□□□ -1.1
SNED1-201ENST00000310397 IGSF10Q6WRI0 2623 aa8.18□□□□□ -1.1
SNED1-201ENST00000310397 NSD1Q96L73 2696 aaPredicted RBP8.18□□□□□ -1.1
SNED1-201ENST00000310397 A0A0D9SG42 100 aa8.18□□□□□ -1.1
SNED1-201ENST00000310397 LINC00472Q9H8W2 130 aa8.18□□□□□ -1.1
SNED1-201ENST00000310397 SPRR1BP22528 89 aa8.15□□□□□ -1.1
SNED1-201ENST00000310397 OXTP01178 125 aa8.15□□□□□ -1.11
SNED1-201ENST00000310397 FLNCQ14315 2725 aa8.14□□□□□ -1.11
SNED1-201ENST00000310397 COL6A3P12111 3177 aa8.14□□□□□ -1.11
SNED1-201ENST00000310397 COX6B2Q6YFQ2 88 aa8.14□□□□□ -1.11
SNED1-201ENST00000310397 BAHCC1Q9P281 2608 aa8.14□□□□□ -1.11
SNED1-201ENST00000310397 J3QL48 77 aa8.11□□□□□ -1.11
SNED1-201ENST00000310397 H3BS24 57 aa8.11□□□□□ -1.11
SNED1-201ENST00000310397 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.09□□□□□ -1.11
SNED1-201ENST00000310397 ZZEF1O43149 2961 aa8.07□□□□□ -1.12
SNED1-201ENST00000310397 SZT2Q5T011 3432 aa8.06□□□□□ -1.12
SNED1-201ENST00000310397 DMAC1Q96GE9 116 aa8.06□□□□□ -1.12
SNED1-201ENST00000310397 PLAC8Q9NZF1 115 aa8.06□□□□□ -1.12
SNED1-201ENST00000310397 CFAP47Q6ZTR5 3102 aa8.06□□□□□ -1.12
SNED1-201ENST00000310397 SMR3BP02814 79 aaPredicted RBP8.05□□□□□ -1.12
SNED1-201ENST00000310397 COL12A1Q99715 3063 aa8.04□□□□□ -1.12
SNED1-201ENST00000310397 TNP2Q05952 138 aa8.04□□□□□ -1.12
SNED1-201ENST00000310397 Q5W150 140 aa8.04□□□□□ -1.12
SNED1-201ENST00000310397 LINC00483Q53H64 154 aa8.04□□□□□ -1.12
SNED1-201ENST00000310397 SPINK7P58062 85 aa8.04□□□□□ -1.12
SNED1-201ENST00000310397 ZCCHC13Q8WW36 166 aaKnown RBP8.04□□□□□ -1.12
SNED1-201ENST00000310397 KRTAP26-1Q6PEX3 210 aa8.02□□□□□ -1.13
SNED1-201ENST00000310397 ASB16-AS1Q495Z4 193 aa8.02□□□□□ -1.13
SNED1-201ENST00000310397 USP34Q70CQ2 3546 aa8□□□□□ -1.13
SNED1-201ENST00000310397 Q6ZR54 194 aa8□□□□□ -1.13
SNED1-201ENST00000310397 CELSR2Q9HCU4 2923 aa8□□□□□ -1.13
SNED1-201ENST00000310397 ATMQ13315 3056 aa7.99□□□□□ -1.13
SNED1-201ENST00000310397 CSAG1Q6PB30 78 aa7.99□□□□□ -1.13
SNED1-201ENST00000310397 DMXL1Q9Y485 3027 aa7.98□□□□□ -1.13
SNED1-201ENST00000310397 PRAC1Q96KF2 57 aa7.98□□□□□ -1.13
SNED1-201ENST00000310397 A0A0A0MQY5 61 aa7.98□□□□□ -1.13
SNED1-201ENST00000310397 KRTAP4-16G5E9R7 235 aaPredicted RBP7.98□□□□□ -1.13
SNED1-201ENST00000310397 TNRC18O15417 2968 aaPredicted RBP7.93□□□□□ -1.14
SNED1-201ENST00000310397 KRTAP29-1A8MX34 341 aaPredicted RBP7.93□□□□□ -1.14
SNED1-201ENST00000310397 EYSQ5T1H1 3165 aa7.92□□□□□ -1.14
SNED1-201ENST00000310397 NIPBLQ6KC79 2804 aaeCLIP7.91□□□□□ -1.14
SNED1-201ENST00000310397 Q6ZSA8 131 aa7.91□□□□□ -1.14
SNED1-201ENST00000310397 HIVEP1P15822 2718 aa7.91□□□□□ -1.14
SNED1-201ENST00000310397 ZANQ9Y493 2812 aa7.9□□□□□ -1.14
SNED1-201ENST00000310397 CAMK2N1Q7Z7J9 78 aa7.9□□□□□ -1.15
SNED1-201ENST00000310397 S4R3F8 94 aa7.88□□□□□ -1.15
SNED1-201ENST00000310397 SPEGQ15772 3267 aa7.88□□□□□ -1.15
SNED1-201ENST00000310397 KRTAP1-5Q9BYS1 174 aa7.85□□□□□ -1.15
SNED1-201ENST00000310397 LCE6AA0A183 80 aa7.85□□□□□ -1.15
SNED1-201ENST00000310397 NF1P21359 2839 aa7.84□□□□□ -1.15
SNED1-201ENST00000310397 RPL37P61927 97 aaKnown RBP7.84□□□□□ -1.15
SNED1-201ENST00000310397 ROMO1P60602 79 aa7.83□□□□□ -1.16
SNED1-201ENST00000310397 MYO15AQ9UKN7 3530 aa7.82□□□□□ -1.16
SNED1-201ENST00000310397 DCHS2Q6V1P9 2916 aa7.8□□□□□ -1.16
SNED1-201ENST00000310397 H1FX-AS1Q4G0G2 97 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms