RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 C9orf153Q5TBE3 101 aa10.46□□□□□ -0.73
PFN1-201ENST00000225655 PPDPFLQ8WWR9 84 aa10.46□□□□□ -0.73
PFN1-201ENST00000225655 PCP4L1A6NKN8 68 aa10.44□□□□□ -0.74
PFN1-201ENST00000225655 F8WEM9 126 aa10.44□□□□□ -0.74
PFN1-201ENST00000225655 MOBPQ13875 183 aa10.44□□□□□ -0.74
PFN1-201ENST00000225655 C3orf22Q8N5N4 141 aa10.44□□□□□ -0.74
PFN1-201ENST00000225655 LINC00304Q8N9R0 145 aa10.44□□□□□ -0.74
PFN1-201ENST00000225655 CLEC2BQ92478 149 aa10.44□□□□□ -0.74
PFN1-201ENST00000225655 FAM218AQ96MZ4 157 aa10.44□□□□□ -0.74
PFN1-201ENST00000225655 SSBP3-AS1Q7Z2R9 100 aa10.43□□□□□ -0.74
PFN1-201ENST00000225655 Q8NBF4 154 aa10.43□□□□□ -0.74
PFN1-201ENST00000225655 H3BQ85 93 aa10.42□□□□□ -0.74
PFN1-201ENST00000225655 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
PFN1-201ENST00000225655 LINC01547P58512 204 aaPredicted RBP10.41□□□□□ -0.74
PFN1-201ENST00000225655 Q8N377 158 aa10.41□□□□□ -0.74
PFN1-201ENST00000225655 SNHG12Q9BXW3 62 aa10.41□□□□□ -0.74
PFN1-201ENST00000225655 TRACP01848 142 aa10.39□□□□□ -0.75
PFN1-201ENST00000225655 COL5A1-AS1Q5SY13 56 aa10.39□□□□□ -0.75
PFN1-201ENST00000225655 SPAG11AQ6PDA7 123 aa10.39□□□□□ -0.75
PFN1-201ENST00000225655 ATXN8Q156A1 80 aa10.38□□□□□ -0.75
PFN1-201ENST00000225655 RETNLBQ9BQ08 111 aa10.38□□□□□ -0.75
PFN1-201ENST00000225655 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
PFN1-201ENST00000225655 ORMDL1Q9P0S3 153 aa10.38□□□□□ -0.75
PFN1-201ENST00000225655 C9orf118A6NHY6 69 aa10.37□□□□□ -0.75
PFN1-201ENST00000225655 H3BUT2 72 aa10.37□□□□□ -0.75
PFN1-201ENST00000225655 LST1O00453 97 aa10.37□□□□□ -0.75
PFN1-201ENST00000225655 MUC2Q02817 5179 aa10.36□□□□□ -0.75
PFN1-201ENST00000225655 FABP2P12104 132 aa10.36□□□□□ -0.75
PFN1-201ENST00000225655 SMIM29Q86T20 159 aa10.36□□□□□ -0.75
PFN1-201ENST00000225655 TRBV20-1A0A075B6N2 111 aa10.35□□□□□ -0.75
PFN1-201ENST00000225655 TAX1BP3O14907 124 aa10.34□□□□□ -0.75
PFN1-201ENST00000225655 A0A0U1RQV1 116 aa10.33□□□□□ -0.76
PFN1-201ENST00000225655 TMEM256-PLSCR3K7ERE1 68 aa10.33□□□□□ -0.76
PFN1-201ENST00000225655 TPRXLQ17RH7 258 aa10.32□□□□□ -0.76
PFN1-201ENST00000225655 Q6JHZ5 121 aa10.32□□□□□ -0.76
PFN1-201ENST00000225655 SPINK1P00995 79 aa10.31□□□□□ -0.76
PFN1-201ENST00000225655 IGLV7-46A0A075B6I9 117 aa10.3□□□□□ -0.76
PFN1-201ENST00000225655 A0A1W2PPM0 123 aa10.3□□□□□ -0.76
PFN1-201ENST00000225655 TCL1BO95988 128 aa10.3□□□□□ -0.76
PFN1-201ENST00000225655 NDUFV3P56181 108 aaKnown RBP10.3□□□□□ -0.76
PFN1-201ENST00000225655 CDIP1Q9H305 208 aa10.28□□□□□ -0.76
PFN1-201ENST00000225655 IGLV8-61A0A075B6I0 122 aa10.27□□□□□ -0.77
PFN1-201ENST00000225655 RPS29P62273 56 aaKnown RBP10.26□□□□□ -0.77
PFN1-201ENST00000225655 CD164Q04900 197 aa10.26□□□□□ -0.77
PFN1-201ENST00000225655 H3BMG7 143 aa10.25□□□□□ -0.77
PFN1-201ENST00000225655 UBE2V1Q13404 147 aa10.25□□□□□ -0.77
PFN1-201ENST00000225655 BAALC-AS2P0C853 105 aa10.24□□□□□ -0.77
PFN1-201ENST00000225655 LIMD2Q9BT23 127 aa10.24□□□□□ -0.77
PFN1-201ENST00000225655 HRCT1Q6UXD1 115 aa10.23□□□□□ -0.77
PFN1-201ENST00000225655 FP248Q71RG6 208 aaPredicted RBP10.22□□□□□ -0.77
PFN1-201ENST00000225655 SPCS1Q9Y6A9 102 aa10.22□□□□□ -0.77
PFN1-201ENST00000225655 ANKRD29Q8N6D5 301 aa10.21□□□□□ -0.77
PFN1-201ENST00000225655 C9JAW5 83 aa10.2□□□□□ -0.78
PFN1-201ENST00000225655 IGFL1Q6UW32 110 aa10.2□□□□□ -0.78
PFN1-201ENST00000225655 A0A1B0GV72 72 aa10.16□□□□□ -0.78
PFN1-201ENST00000225655 RBM3P98179 157 aaKnown RBP10.16□□□□□ -0.78
PFN1-201ENST00000225655 A0A0G2JQZ4 141 aa10.15□□□□□ -0.78
PFN1-201ENST00000225655 JMJD7-PLA2G4BH0Y9G9 81 aa10.15□□□□□ -0.78
PFN1-201ENST00000225655 LCE2AQ5TA79 106 aaPredicted RBP10.15□□□□□ -0.78
PFN1-201ENST00000225655 DSCR8Q96T75 97 aa10.15□□□□□ -0.78
PFN1-201ENST00000225655 H3BT86 120 aa10.14□□□□□ -0.79
PFN1-201ENST00000225655 GTF2H5Q6ZYL4 71 aa10.14□□□□□ -0.79
PFN1-201ENST00000225655 KRTAP13-3Q3SY46 172 aa10.13□□□□□ -0.79
PFN1-201ENST00000225655 TEN1Q86WV5 123 aa10.13□□□□□ -0.79
PFN1-201ENST00000225655 TRBV7-7A0A0K0K1E9 115 aa10.12□□□□□ -0.79
PFN1-201ENST00000225655 K7EP34 96 aa10.12□□□□□ -0.79
PFN1-201ENST00000225655 Q6Q795 121 aa10.12□□□□□ -0.79
PFN1-201ENST00000225655 Q5XG85 94 aa10.11□□□□□ -0.79
PFN1-201ENST00000225655 KRTAP9-2Q9BYQ4 174 aa10.11□□□□□ -0.79
PFN1-201ENST00000225655 SS18L2Q9UHA2 77 aa10.1□□□□□ -0.79
PFN1-201ENST00000225655 MUC17Q685J3 4493 aa10.09□□□□□ -0.79
PFN1-201ENST00000225655 TRBV7-4A0A0J9YYF1 115 aa10.07□□□□□ -0.8
PFN1-201ENST00000225655 CCKP06307 115 aa10.07□□□□□ -0.8
PFN1-201ENST00000225655 PDE6GP18545 87 aa10.07□□□□□ -0.8
PFN1-201ENST00000225655 C21orf62-AS1Q17RA5 79 aa10.07□□□□□ -0.8
PFN1-201ENST00000225655 FAT4Q6V0I7 4981 aa10.06□□□□□ -0.8
PFN1-201ENST00000225655 MTURNQ8N3F0 131 aa10.06□□□□□ -0.8
PFN1-201ENST00000225655 ASB16-AS1Q495Z4 193 aa10.05□□□□□ -0.8
PFN1-201ENST00000225655 VPS25Q9BRG1 176 aa10.05□□□□□ -0.8
PFN1-201ENST00000225655 A0A087WSZ3 146 aa10.03□□□□□ -0.8
PFN1-201ENST00000225655 LOC110117498A0A087WWA1 95 aa10.02□□□□□ -0.81
PFN1-201ENST00000225655 A0A1W2PNM2 257 aa10.02□□□□□ -0.81
PFN1-201ENST00000225655 OBSCN-AS1Q96MR7 158 aa10□□□□□ -0.81
PFN1-201ENST00000225655 C14orf132Q9NPU4 83 aa10□□□□□ -0.81
PFN1-201ENST00000225655 SEC61BP60468 96 aaKnown RBP9.99□□□□□ -0.81
PFN1-201ENST00000225655 F8W1H4 67 aa9.98□□□□□ -0.81
PFN1-201ENST00000225655 C1orf195Q5TG92 126 aa9.98□□□□□ -0.81
PFN1-201ENST00000225655 A0A1B0GW54 56 aa9.97□□□□□ -0.81
PFN1-201ENST00000225655 Q6ZQT0 140 aa9.97□□□□□ -0.81
PFN1-201ENST00000225655 PRO0461Q9UI25 63 aa9.96□□□□□ -0.82
PFN1-201ENST00000225655 KRTAP9-6A0A140TA67 174 aa9.95□□□□□ -0.82
PFN1-201ENST00000225655 XP32Q5T750 250 aa9.94□□□□□ -0.82
PFN1-201ENST00000225655 SMCPP49901 116 aaPredicted RBP9.93□□□□□ -0.82
PFN1-201ENST00000225655 KRTAP4-1Q9BYQ7 146 aa9.93□□□□□ -0.82
PFN1-201ENST00000225655 SIGMAR1Q99720 223 aa9.86□□□□□ -0.83
PFN1-201ENST00000225655 A0A1B0GV90 55 aa9.85□□□□□ -0.83
PFN1-201ENST00000225655 IGKV4-1P06312 121 aa9.83□□□□□ -0.84
PFN1-201ENST00000225655 ETDBQ3ZM63 59 aa9.83□□□□□ -0.84
PFN1-201ENST00000225655 J3KT08 172 aa9.82□□□□□ -0.84
PFN1-201ENST00000225655 Q96NJ1 140 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms