RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Ube2e1P52482 193 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr1441Q8VFV3 318 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Slamf6Q9ET39 351 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv1-55A0A075B5W6 117 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv1-62-2A0A0A6YXZ4 119 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm37388A0A0A6YY46 143 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Snx22Q8C084 192 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr1256Q8VGP1 306 aa7.61□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv1-69A0A0G2JFS5 117 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm12886B1AZM5 119 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Omt2bD3YX29 119 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Lynx1P0DP60 116 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gnb4P29387 340 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Znf575Q3TXZ1 239 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Spint3Q3UW09 88 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Msrb3Q8BU85 253 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm4763Q8CFJ5 196 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Dazap1Q9JII5 406 aaKnown RBP7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Trav3-4A0A075B654 114 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm5741B2RVA4 72 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm5129F6YHA9 99 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 P01726 129 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Defb30Q30KN4 75 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 B020031M17RikQ3UT11 173 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Tmem256Q5F285 113 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm9949Q8C9F4 104 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Q8R092 253 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 HeylQ9DBX7 326 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv9-4A0A0A6YWH6 117 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Sap30O88574 220 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ccl12Q62401 104 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 9230109A22RikQ8BHE6 111 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm27027S4R1M6 97 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Csmd2V9GX34 3611 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Trbv3A0A0A6YYE2 117 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr748E9Q9Z0 307 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Rnase9P60154 184 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Trav15-1-dv6-1Q5R1D2 117 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 ManfQ9CXI5 179 aaKnown RBP7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Atxn7l1Q9CZ05 146 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Necap2Q9D1J1 266 aa7.6□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Scgb1b19F6WYW0 93 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 GchfrP99025 84 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm17334Q8C6U3 126 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Vmn1r202Q8R259 302 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gatad1Q920S3 266 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv5-6A0A075B5Q0 117 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Gm9925F6T2U3 160 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 C1ql4Q4ZJM9 238 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Olfr975Q8VG91 310 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Cldn16Q925N4 235 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Ighv5-16A0A0B4J1P4 117 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Taf15Q8BQ46 557 aaKnown RBP7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Spaca3Q9D9X8 221 aa7.59□□□□□ -1.19
Sh3rf1-202ENSMUST00000209611 Dmxl2Q8BPN8 3032 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm21900J3QP38 180 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 TymsP07607 307 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Fabp6P51162 128 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Lmo4P61969 165 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Klre1Q8CJC7 226 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ptpn13Q64512 2453 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Lgals1P16045 135 aaKnown RBP7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Zfp36l1P23950 338 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 SlpiP97430 131 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Pilrb2Q2YFS1 225 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Slamf7Q8BHK6 333 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 PgpQ8CHP8 321 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Fam213bQ9DB60 201 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gpr35Q9ES90 307 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Zfp979A2A799 407 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 1700067P10RikG3X8U2 183 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Spsb3Q571F5 354 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Uqcrfs1Q9CR68 274 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Srsf9Q9D0B0 222 aaKnown RBP7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ube2cQ9D1C1 179 aa7.58□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Trav9-1A0A075B601 112 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Psg18B2RSG7 476 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Twist1P26687 206 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Slc25a29Q8BL03 306 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Chac2Q9CQG1 178 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Cbln1Q9R171 193 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 OtoglF7A4A7 2325 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Igkv1-133A0A0B4J1H8 120 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Amn1B8JKV0 258 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm10036E9PYL9 178 aaKnown RBP7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Vamp8O70404 101 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Hoxa3P02831 443 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Olfr1209Q3SXJ3 310 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ndfip1Q8R0W6 221 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ighv1-39A0A075B5V5 117 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Gm37988J3QM41 62 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 CklfQ9DAS1 152 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Tmprss5Q9ER04 455 aa7.57□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Ighv1-15A0A0A6YXA5 117 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 1500009C09RikD3YYW9 81 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Tnfsf11O35235 316 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Mfge8P21956 463 aaKnown RBP7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Itpr1P11881 2749 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 P03980 138 aa7.56□□□□□ -1.2
Sh3rf1-202ENSMUST00000209611 Hoxb4P10284 250 aa7.56□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms