RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Q8VC23 124 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Tcrg-C2A0A075B5Z2 167 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Trav7n-4A0A075B620 113 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 P01725 110 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 TcraP01849 138 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 P01853 167 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 S100a10P08207 97 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Lyz1P17897 148 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Ube2l3P68037 154 aaKnown RBP4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Tff3Q62395 81 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Olfr1419Q7TQS2 343 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Slc25a16Q8C0K5 332 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 GlrxQ9QUH0 107 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Plekhb2Q9QZC7 221 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Cacna1aP97445 2368 aa4.99□□□□□ -1.61
Lig4-202ENSMUST00000170033 Vma21-psA0A140T8R2 101 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 P06330 118 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Psmg4P0C7N9 123 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Reg1P43137 165 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Loxl2P58022 776 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Gm5150Q1AN92 299 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Gm614Q3V2K1 191 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Olfr149Q60888 311 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Mgst1Q91VS7 155 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Q9D7E4 109 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Tnfrsf13cQ9D8D0 175 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Josd1Q9DBJ6 202 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Gm14325A2AW67 498 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Zcchc24B2RVL6 241 aaKnown RBP4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Defa30E9QPZ2 93 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 F2rl2O08675 369 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 P01801 115 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Ly6c1P0CW02 131 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Rbp4Q00724 201 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Ang4Q3TMQ6 144 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Gm4861Q8C5A4 106 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Q9CR34 168 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 Frem1Q684R7 2191 aa4.98□□□□□ -1.61
Lig4-202ENSMUST00000170033 P01790 122 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 P18532 116 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 TbpP29037 316 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Gm9733Q1AN91 178 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Cox7a2lQ61387 111 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Prima1Q810F0 153 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Lypd1Q8BLC3 141 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Dkk4Q8VEJ3 221 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Sh2d6Q9D413 297 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 H2al3Q9D4U4 128 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Med12lQ8BQM9 2157 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Trav13-1A0A075B644 110 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Olfr1185-ps1F6XP16 303 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Pde6hP61249 83 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 MymxQ2Q5T5 84 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 A930003A15RikQ3U552 87 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Slamf7Q8BHK6 333 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Ccl28Q9JIL2 130 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Nat6Q9R123 314 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Zfp53Q9Z117 652 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 SpegQ62407 3262 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Trav13n-2A0A0G2JF93 110 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Gm10197F6QEY5 67 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Gm26661M0QWV4 156 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Col8a1Q00780 744 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Arl14eplQ3UKZ7 152 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Olfr433Q7TRV9 314 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 GaptQ8CB93 157 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Fam216aQ9DB54 251 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Med13Q5SWW4 2171 aa4.97□□□□□ -1.61
Lig4-202ENSMUST00000170033 Urb1Q571H0 2274 aaKnown RBP4.96□□□□□ -1.61
Lig4-202ENSMUST00000170033 Abca7Q91V24 2159 aa4.96□□□□□ -1.61
Lig4-202ENSMUST00000170033 TncQ80YX1 2110 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Ighv14-2A0A075B5R7 117 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Olfr235E9Q9Z6 312 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 PspnO70300 156 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Edn2P22389 175 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Ube2g1P62254 170 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm1968Q3T9I3 115 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Zfp248Q640N4 576 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Znf641Q8BZ34 422 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Muc15Q8C6Z1 331 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Olfr498Q8VEW2 330 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Them7Q9DCP4 223 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Rs1Q9Z1L4 224 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Dchs2A0A0A6YW72 3346 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 NacaP70670 2187 aaKnown RBP4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Trav14n-3A0A075B645 120 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Platr25A0A1Y7VIZ1 466 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Cldn34c3J3QJW5 233 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Cldn34c2J3QNM1 233 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Ccl1P10146 92 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Pate4Q09098 99 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Wfdc8Q4KUS1 273 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Spsb3Q571F5 354 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Olfr996Q7TRA0 314 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Snx22Q8C084 192 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Gm9958Q8C9U4 106 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Cldn34c1Q8K193 234 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 Ube2tQ9CQ37 204 aa4.96□□□□□ -1.62
Lig4-202ENSMUST00000170033 AtrxQ61687 2476 aaKnown RBP4.95□□□□□ -1.62
Lig4-202ENSMUST00000170033 Sdk1Q3UH53 2193 aa4.95□□□□□ -1.62
Retrieved 100 of 22,080 RNA–protein pairs in 71.8 ms