RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 NbasE9Q411 2356 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm37388A0A0A6YY46 143 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Olfr1255A2AUA4 310 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Fgf4P11403 202 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Plac8l1Q08EJ0 177 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Q3U595 105 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Olfr325Q5NCD2 326 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Cdkn2aQ64364 169 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Vmn1r35Q8R2E2 296 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Clcf1Q9QZM3 225 aa6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 HnrnpdlQ9Z130 301 aaKnown RBP6.82□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Dmxl2Q8BPN8 3032 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Col4a2P08122 1707 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 NbeaQ9EPN1 2936 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Med13Q5SWW4 2171 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm12886B1AZM5 119 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Olfr294F7CWV4 335 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Zfp809G3X9G7 402 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Hmgn1P18608 96 aaKnown RBP6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Fam3dP97805 223 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Clpsl2Q3UW21 102 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Defa17Q64016 82 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Tmem106bQ80X71 275 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Olfr535Q8VGL3 312 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Rbmxl2Q9DAE2 385 aaKnown RBP6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Pxmp4Q9JJW0 212 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Rabac1Q9Z0S9 185 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Myo18aQ9JMH9 2050 aaKnown RBP6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 P01736 120 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Fbn2Q61555 2907 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Eif5a2Q8BGY2 153 aaKnown RBP6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Bex3Q9WTZ9 124 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Serp1Q9Z1W5 66 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Atoh7Q9Z2E5 149 aa6.81□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Pcnx3Q8VI59 2028 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Ighv1-74A0A0G2JGK2 117 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Omt2aF6ZJR3 104 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm20877J3QPZ4 227 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 P01750 117 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Defa11P50709 85 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Rph3alQ768S4 302 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Defb11Q8R2I7 77 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Srsf9Q9D0B0 222 aaKnown RBP6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 CklfQ9DAS1 152 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 PthQ9Z0L6 115 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Nup205A0A0J9YUD5 2061 aaKnown RBP6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Dock4P59764 1978 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Abca7Q91V24 2159 aa6.8□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm38303A0A0A6YWW8 100 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Cd7P50283 210 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Mob4Q6PEB6 225 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Znf32Q80V23 272 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Oard1Q8R5F3 152 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Iah1Q9DB29 249 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Psmb2Q9R1P3 201 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Golga4Q91VW5 2238 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Tet2Q4JK59 1912 aaKnown RBP6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Ighv6-7A0A0A6YWU3 119 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Ighv1-15A0A0A6YXA5 117 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Igkv6-25A0A140T8N7 115 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm6569D3YTM9 175 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 4930455H04RikD3Z622 58 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Fam181aJ3QNB7 292 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Stk17bQ8BG48 372 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Brk1Q91VR8 75 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Mpc2Q9D023 127 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Plpp2Q9DAX2 276 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Lypd2Q9DD23 127 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Exph5Q0VAV2 1960 aa6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 HelzQ6DFV5 1964 aaKnown RBP6.79□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm20458E9PXJ7 78 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 SdcbpO08992 299 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Ebi3O35228 228 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 P18526 117 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Defa7P50705 93 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm4792Q569Q2 183 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Foxs1Q61574 329 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm5142Q8C5X9 133 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 SinhcafQ8C8M1 221 aaKnown RBP6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Chchd2Q9D1L0 153 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Loxhd1C8YR32 2068 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Ranbp2Q9ERU9 3053 aaKnown RBP6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Zfp930A0A1D5RM15 441 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm12216A0A1W2P827 62 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm21921J3QNB5 361 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Fam240aJ3QNP9 97 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 LtaP09225 202 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Cd28P31041 218 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Edn3P48299 214 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Phf5aP83870 110 aaKnown RBP6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Gm6899Q3USS0 134 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Vmn1r202Q8R259 302 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Mrpl3Q99N95 348 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 1700086D15RikQ9D9E9 151 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Defb5Q9EPV9 64 aa6.78□□□□□ -1.32
Upf3b-201ENSMUST00000076265 Cacna1aP97445 2368 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Trbv5A0A0B4J1G9 113 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 PpibP24369 216 aaKnown RBP6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Cmc4Q61908 68 aa6.77□□□□□ -1.33
Upf3b-201ENSMUST00000076265 Ahctf1Q8CJF7 2243 aaKnown RBP6.77□□□□□ -1.33
Retrieved 100 of 22,080 RNA–protein pairs in 48.2 ms