RNA–Protein interactions for RNA: ENSMUST00000055636.12

Clrn1-202, Transcript of Clarin-1, mousemouse

TSL 1 (best) BASIC

Gene Clrn1, Length 3,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-202ENSMUST00000055636 Hcfc1Q61191 2045 aaKnown RBP5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Trav4-4-dv10A0A075B651 110 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm12057A0A087WR21 115 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Scgb1b24B1B0N6 92 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 BC107364E9Q5A2 140 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Ca1P13634 261 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm1968Q3T9I3 115 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Bsph1Q3UW26 133 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Spata46Q4FZF2 204 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Trappc1Q5NCF2 145 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm12689Q8BQU9 117 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Ifi27Q8C6G0 260 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 MturnQ8CGA4 131 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Ly6g5bQ8K1T4 194 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr873Q8VFJ0 319 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Cnn3Q9DAW9 330 aaKnown RBP5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Pgpep1Q9ESW8 209 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tcrg-C2A0A075B5Z2 167 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Zfp950A0A0U1RQ46 609 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 A730046J19RikA0A1B0GSN8 89 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tmem29A2ANF5 204 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Rtl10D3YWW5 146 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm6871L7N248 545 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Onecut1O08755 465 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 P01853 167 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Loxl2P58022 776 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 YrdcQ3U5F4 280 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 9130213A22RikQ3V3T2 120 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr1012Q8VFJ7 311 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Q9CQ90 155 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tmem52Q9D702 196 aa5.68□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Defa35E9QLQ1 93 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 LtaP09225 202 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Rpl27aP14115 148 aaKnown RBP5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 SrstQ06666 185 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tmem241Q3UME2 297 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Pxt1Q8K459 51 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tm4sf20Q9CQY8 226 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 PpdpfQ9CR37 115 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Osr1Q9WVG7 266 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 BC030500E9Q6W0 185 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 BokO35425 213 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 P01793 123 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 IappP12968 93 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 LoxP28301 411 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Crip1P63254 77 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 ErhP84089 104 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 B430305J03RikQ8BQQ8 176 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tctex1d2Q9CQ66 144 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Mrpl20Q9CQL4 149 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Stpg1Q9D2F5 341 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Rnf114Q9ET26 229 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Cend1Q9JKC6 149 aa5.67□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Plcxd2B2RXA1 340 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Defa6P50704 93 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr1437Q7TQR7 312 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Scnm1Q8K136 229 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Ndfip1Q8R0W6 221 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Ufc1Q9CR09 167 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Dido1Q8C9B9 2256 aaKnown RBP5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm15217A2CG07 155 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm5093E9PZB3 174 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr177E9Q7W1 309 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Defa30E9QPZ2 93 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Slc25a17O70579 307 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Pilrb2Q2YFS1 225 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tmem88bQ3TYP4 173 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Neil2Q6R2P8 329 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr1380Q7TQT5 311 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr761Q7TRJ0 323 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr411Q7TRW8 315 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Rnase2aQ8K196 155 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gtf2h5Q8K2X8 71 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr1454Q8VFW2 307 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tspo2Q9CRZ8 162 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Card19Q9D1I2 183 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Usp9xP70398 2559 aaKnown RBP5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Ighv1-7A0A075B5T7 117 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Trav9-1A0A075B601 112 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm45521A0A1B0GRK0 198 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 NpsP0C0P8 89 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 P0C913 63 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm7489Q3UT34 171 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Oosp2Q4FZG8 168 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Olfr823Q7TRH2 315 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Spink6Q8BT20 105 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Eda2rQ8BX35 297 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Errfi1Q99JZ7 461 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Q9CR34 168 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Tex48Q9DA81 110 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 CtrlQ9ER05 264 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 PerpQ9JK95 193 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Zfp53Q9Z117 652 aa5.66□□□□□ -1.5
Clrn1-202ENSMUST00000055636 LystP97412 3788 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Ighv14-3A0A075B5R9 117 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Trav14d-1A0A075B6B1 121 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Trdv2-1A0A0G2JGB9 116 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Gm16442D3YZG3 307 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 CrxO54751 299 aa5.65□□□□□ -1.5
Clrn1-202ENSMUST00000055636 Pla2g2aP31482 146 aa5.65□□□□□ -1.5
Retrieved 100 of 22,080 RNA–protein pairs in 67.3 ms