RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Igkv4-90A0A075B5L3 117 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Trbv13-3A0A0B4J1H2 113 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 H2al1jA2BFR3 109 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr779E9PUS9 130 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 EtdQ80SW5 59 aa6.69□□□□□ -1.34
Trim39-201ENSMUST00000042717 Scgb1b24B1B0N6 92 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm7849D3YX03 116 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Tcte2E9PY37 120 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm9602J3QPD5 205 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 DdtO35215 118 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Hist1h2bmP10854 126 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Zfp36l1P23950 338 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Hist1h2bhQ64478 126 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Hist2h2bbQ64525 126 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Hist1h2bcQ6ZWY9 126 aaKnown RBP6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Mrps10Q80ZK0 160 aaKnown RBP6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Shisa2Q8QZV2 295 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Kcnip3Q9QXT8 256 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1369-ps1A0A140T8K7 317 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Nat8f7E0CYR6 227 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Aqp7O54794 303 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Foxh1O88621 401 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm5150Q1AN92 299 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr148Q60887 310 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr16Q62007 309 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1246Q7TQZ6 314 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Trav6n-5A0A075B621 112 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Trav6-5A0A075B6B5 112 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Igkv4-71A0A0G2JEH0 117 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr709-ps1A0A140T8J9 307 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 P01812 117 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 SbsponQ3UPR9 264 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 2810408A11RikQ6NSU2 435 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Tmem177Q8BPE4 311 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 B430305J03RikQ8BQQ8 176 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Trpt1Q8K3A2 249 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr715Q8VG49 315 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 3110018I06RikQ9CXS0 120 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Bub3Q9WVA3 326 aa6.68□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ighv8-2A0A0A6YW58 119 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Trav7-5A0A0G2JFX6 112 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Zfp983E9PUT0 460 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr715bE9Q725 315 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm21900J3QP38 180 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm6871L7N248 545 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 P01674 108 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Wipf2Q6PEV3 440 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Klk10Q99M20 278 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 9530053A07RikE9PVG8 2581 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm5741B2RVA4 72 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 P01727 129 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Cd81P35762 236 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Smim9Q3V0X1 137 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Q8C3M9 231 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1445Q8VFW9 314 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gpr35Q9ES90 307 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Crlf1Q9JM58 425 aa6.67□□□□□ -1.34
Trim39-201ENSMUST00000042717 Tenm4Q3UHK6 2771 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ighv6-3A0A075B5T2 118 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Trbv3A0A0A6YYE2 117 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Tcrg-V4A0A0B4J1J8 138 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 P01896 185 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ifi27Q8C6G0 260 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 AtrQ9JKK8 2635 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Hoxd3P09027 433 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Tac3P55099 116 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr553Q7TRS6 326 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Spink2Q8BMY7 86 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Stxbp6Q8R3T5 210 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1295Q8VF48 312 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Mgst1Q91VS7 155 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 V1ra8Q9EQ48 279 aa6.66□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ighv1-80A0A075B5Y3 117 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Shisal2aA2A9G7 189 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Olfr1185-ps1F6XP16 303 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 H2al1nQ497L1 109 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Jpt2Q6PGH2 190 aaKnown RBP6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Slc25a29Q8BL03 306 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 4930474N05RikQ8BVR5 218 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 GgctQ9D7X8 188 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Xirp2Q4U4S6 3784 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Zfp825A0A1Y7VK00 292 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Socs3O35718 225 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Sfrp2P97299 295 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ripply2Q2WG76 128 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Gm16686Q3UMN9 131 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 BC100530Q497J0 97 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Ifi27l2bQ8VC49 283 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Scgb3a2Q920H1 91 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 SNORCQ9CXL7 121 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 Cml1Q9JIZ0 222 aa6.65□□□□□ -1.34
Trim39-201ENSMUST00000042717 CicQ924A2 2510 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Ccdc71lE9Q4T4 218 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Olfr235E9Q9Z6 312 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Scgb1b19F6WYW0 93 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Hist1h2bfP10853 126 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 SbpP15501 199 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Zcwpw2Q08EN7 125 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Tppp2Q0P5Y3 170 aa6.65□□□□□ -1.35
Trim39-201ENSMUST00000042717 Q4KKZ1 196 aa6.65□□□□□ -1.35
Retrieved 100 of 22,080 RNA–protein pairs in 57.5 ms