RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Lhfpl1Q80SV1 220 aa18.77■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Rchy1Q9CR50 261 aa18.77■□□□□ 0.6
Sh3rf1-201ENSMUST00000034060 Spink1P09036 80 aa18.77■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Cd99Q8VCN6 175 aa18.77■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Tmem86bQ497J1 226 aa18.76■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Tusc5Q8C838 173 aa18.76■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Zfp648D3Z0W3 525 aa18.76■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Lmo1Q924W9 156 aa18.76■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Wnt2P21552 360 aa18.76■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 SpinklQ8CEK3 90 aa18.75■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 RttnQ8R4Y8 2226 aa18.75■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Il19Q8CJ70 176 aa18.75■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Ighv1-62-2A0A0A6YXZ4 119 aa18.75■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Gm10188Q3V432 135 aa18.75■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Ccl12Q62401 104 aa18.75■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 CntfrO88507 372 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Trav4n-4A0A075B615 110 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Trav14n-2A0A0G2JDF5 121 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Socs3O35718 225 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Vwc2lQ505H4 222 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 5730522E02RikQ5SP45 163 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Tomm7Q9D173 55 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Gm5294J3QP53 216 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 P01726 129 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Rspo3Q2TJ95 277 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Brd3osA0A1B0GRB6 84 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 A730015C16RikQ8C992 119 aa18.74■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Ighv1-81A0A075B5Y4 117 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 P04946 108 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Gm15080A2BI02 449 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Defb3Q9WTL0 63 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 PkigO70139 76 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Smim26Q3V460 107 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 RtbdnQ8QZY4 247 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 SelenokQ9JLJ1 94 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Wt1P22561 449 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Fxyd7P59648 80 aa18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Taf15Q8BQ46 557 aaKnown RBP18.73■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Oxld1Q9CR10 201 aa18.72■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 3110018I06RikQ9CXS0 120 aa18.72■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 IappP12968 93 aa18.72■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Dennd4aE9Q8V6 1869 aa18.72■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Myod1P10085 318 aa18.72■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Ankrd39Q9D2X0 183 aa18.72■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Igkv19-93A0A0G2JFZ3 115 aa18.71■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 A930003A15RikQ3U552 87 aa18.71■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Msrb2Q78J03 175 aa18.71■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Ighv1-49A0A0A6YWX2 117 aa18.71■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Inafm1E9PV59 130 aa18.71■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Scn10aQ6QIY3 1958 aa18.71■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 Apc2Q9Z1K7 2274 aa18.71■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 P01788 123 aa18.71■□□□□ 0.59
Sh3rf1-201ENSMUST00000034060 P01812 117 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Svs5P30933 122 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 F930015N05RikQ8C3A3 210 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Q8C708 225 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 LeprotO89013 131 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Nup214Q80U93 2085 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Igkv4-90A0A075B5L3 117 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Zcchc24B2RVL6 241 aaKnown RBP18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 March3Q8BRX9 218 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 SbpP15501 199 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Defb30Q30KN4 75 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Pom121l2Q5SW25 972 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Tomm6Q9CQN3 74 aa18.7■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Trav14-3A0A075B607 120 aa18.69■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Igkv6-23A0A140T8N5 115 aa18.69■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 P01724 129 aa18.69■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 P01727 129 aa18.69■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Defa27F2Z403 93 aa18.69■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Trav12-3A0A075B648 115 aa18.69■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Lrcol1Q3URS3 161 aa18.69■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Igkv4-53A0A0G2JFC6 119 aa18.68■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 H1fxQ80ZM5 188 aa18.68■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Gm28778A0A087WSK7 233 aa18.68■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Ighv1-9A0A0A6YW37 117 aa18.68■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Gm7102J3QQ10 178 aa18.68■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 P03980 138 aa18.68■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Gm5105Q8C6Y9 112 aa18.68■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Parm1Q923D3 296 aa18.68■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 P01725 110 aa18.67■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Ang6Q5GAN0 147 aa18.67■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Trav9-1A0A075B601 112 aa18.67■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Lamtor3O88653 124 aa18.67■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Vopp1Q8R1C3 172 aa18.67■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Ighv1-31A0A0A6YWK5 117 aa18.67■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Lyzl4Q9D925 145 aa18.67■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Tctex1d4Q8CDY7 219 aa18.67■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Trav14-2A0A075B694 121 aa18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 P01790 122 aa18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Lynx1P0DP60 116 aa18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Ndufa4Q62425 82 aaKnown RBP18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Them7Q9DCP4 223 aa18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Thap8E9Q695 213 aa18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 1700001C19RikQ8K168 210 aa18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Clec5aQ9R007 190 aa18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Pygo2Q80V76 405 aa18.66■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Ighv1-80A0A075B5Y3 117 aa18.65■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Ndufa3Q9CQ91 84 aa18.65■□□□□ 0.58
Sh3rf1-201ENSMUST00000034060 Ccl25O35903 144 aa18.65■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms