RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 NPC2P61916 151 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 LINC00526Q96FQ7 95 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 NACAE9PAV3 2078 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 IGHV3-73A0A0B4J1V6 119 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 TRBV6-5A0A0K0K1A5 114 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 TRBV7-7A0A0K0K1E9 115 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 LCE6AA0A183 80 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 UQCRQO14949 82 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 IGHV3-53P01767 116 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 C14orf177Q52M58 125 aa4.94□□□□□ -1.62
SCARB2-209ENST00000638409 TEX49A0A1B0GTD5 131 aa4.93□□□□□ -1.62
SCARB2-209ENST00000638409 A0A0B4J2C4 111 aa4.93□□□□□ -1.62
SCARB2-209ENST00000638409 RHOHQ15669 191 aa4.93□□□□□ -1.62
SCARB2-209ENST00000638409 MIR7-3HGQ8N6C7 128 aa4.93□□□□□ -1.62
SCARB2-209ENST00000638409 A0A096LPF7 62 aa4.93□□□□□ -1.62
SCARB2-209ENST00000638409 UBE2WQ96B02 151 aa4.93□□□□□ -1.62
SCARB2-209ENST00000638409 VPS13DQ5THJ4 4388 aa4.92□□□□□ -1.62
SCARB2-209ENST00000638409 IGHV3-30-3P0DP02 117 aa4.92□□□□□ -1.62
SCARB2-209ENST00000638409 TIMM21Q9BVV7 248 aa4.92□□□□□ -1.62
SCARB2-209ENST00000638409 ICOSQ9Y6W8 199 aa4.92□□□□□ -1.62
SCARB2-209ENST00000638409 I3L3M4 83 aa4.92□□□□□ -1.62
SCARB2-209ENST00000638409 ATXN8Q156A1 80 aa4.92□□□□□ -1.62
SCARB2-209ENST00000638409 DNAH6Q9C0G6 4158 aa4.91□□□□□ -1.62
SCARB2-209ENST00000638409 KMT2CQ8NEZ4 4911 aaKnown RBP4.91□□□□□ -1.62
SCARB2-209ENST00000638409 LECT2O14960 151 aa4.91□□□□□ -1.62
SCARB2-209ENST00000638409 CLEC2BQ92478 149 aa4.91□□□□□ -1.62
SCARB2-209ENST00000638409 DPH3Q96FX2 82 aa4.91□□□□□ -1.62
SCARB2-209ENST00000638409 TRBV10-1A0A0K0K1A3 114 aa4.91□□□□□ -1.62
SCARB2-209ENST00000638409 UPK3BQ9BT76 320 aa4.91□□□□□ -1.62
SCARB2-209ENST00000638409 SACSQ9NZJ4 4579 aa4.9□□□□□ -1.62
SCARB2-209ENST00000638409 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.9□□□□□ -1.62
SCARB2-209ENST00000638409 CCL18P55774 89 aa4.9□□□□□ -1.62
SCARB2-209ENST00000638409 LY6G6CO95867 125 aa4.9□□□□□ -1.63
SCARB2-209ENST00000638409 ESRGQ1W209 222 aa4.9□□□□□ -1.63
SCARB2-209ENST00000638409 FAM229BQ4G0N7 80 aa4.9□□□□□ -1.63
SCARB2-209ENST00000638409 HIGD2BQ4VC39 106 aa4.9□□□□□ -1.63
SCARB2-209ENST00000638409 TRBV10-2A0A0K0K1G8 114 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 CRYGAP11844 174 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 COX7CP15954 63 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 LYPD5Q6UWN5 251 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 C2orf82Q6UX34 121 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 LINC01600Q96MT4 127 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 CYSTM1Q9H1C7 97 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 NDUFA12Q9UI09 145 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.89□□□□□ -1.63
SCARB2-209ENST00000638409 TRBV30A0A0K0K1B3 111 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 hADV29S1A0JD25 119 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 IGKV2-29A2NJV5 120 aaPredicted RBP4.89□□□□□ -1.63
SCARB2-209ENST00000638409 A8MUU9 505 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 UBE2BP63146 152 aa4.89□□□□□ -1.63
SCARB2-209ENST00000638409 KMT2AQ03164 3969 aa4.88□□□□□ -1.63
SCARB2-209ENST00000638409 TRAV13-1A0A0B4J241 112 aa4.88□□□□□ -1.63
SCARB2-209ENST00000638409 IGHV1-58A0A0C4DH39 117 aa4.88□□□□□ -1.63
SCARB2-209ENST00000638409 KRTAP29-1A8MX34 341 aaPredicted RBP4.88□□□□□ -1.63
SCARB2-209ENST00000638409 MRPS36P82909 103 aaKnown RBP4.88□□□□□ -1.63
SCARB2-209ENST00000638409 MIAQ16674 131 aa4.88□□□□□ -1.63
SCARB2-209ENST00000638409 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
SCARB2-209ENST00000638409 TRBV7-6A0A0J9YX20 115 aa4.87□□□□□ -1.63
SCARB2-209ENST00000638409 TRACP01848 142 aa4.87□□□□□ -1.63
SCARB2-209ENST00000638409 SOSTDC1Q6X4U4 206 aa4.87□□□□□ -1.63
SCARB2-209ENST00000638409 UBE2DNLQ8IWF7 75 aa4.87□□□□□ -1.63
SCARB2-209ENST00000638409 SPANXDQ9BXN6 97 aa4.87□□□□□ -1.63
SCARB2-209ENST00000638409 RYR2Q92736 4967 aa4.86□□□□□ -1.63
SCARB2-209ENST00000638409 ZNF861PO60384 105 aa4.86□□□□□ -1.63
SCARB2-209ENST00000638409 TMEM258P61165 79 aa4.86□□□□□ -1.63
SCARB2-209ENST00000638409 LELP1Q5T871 98 aa4.86□□□□□ -1.63
SCARB2-209ENST00000638409 UBE2D4Q9Y2X8 147 aa4.86□□□□□ -1.63
SCARB2-209ENST00000638409 ZNF625Q96I27 306 aaPredicted RBP4.86□□□□□ -1.63
SCARB2-209ENST00000638409 HYDINQ4G0P3 5121 aa4.86□□□□□ -1.63
SCARB2-209ENST00000638409 DEFB116Q30KQ4 102 aa4.85□□□□□ -1.63
SCARB2-209ENST00000638409 Q6ZR54 194 aa4.85□□□□□ -1.63
SCARB2-209ENST00000638409 CDKN2A-AS1Q9UH64 79 aa4.85□□□□□ -1.63
SCARB2-209ENST00000638409 COX6CP09669 75 aa4.85□□□□□ -1.63
SCARB2-209ENST00000638409 KRTAP7-1Q8IUC3 87 aa4.85□□□□□ -1.63
SCARB2-209ENST00000638409 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.84□□□□□ -1.63
SCARB2-209ENST00000638409 H3BT86 120 aa4.84□□□□□ -1.63
SCARB2-209ENST00000638409 DNAH10OSP0CZ25 163 aa4.84□□□□□ -1.63
SCARB2-209ENST00000638409 COX6A2Q02221 97 aa4.84□□□□□ -1.63
SCARB2-209ENST00000638409 SMCR5Q8TEV8 140 aa4.84□□□□□ -1.63
SCARB2-209ENST00000638409 KRTAP9-4Q9BYQ2 154 aa4.84□□□□□ -1.63
SCARB2-209ENST00000638409 RYR3Q15413 4870 aa4.84□□□□□ -1.63
SCARB2-209ENST00000638409 NBDYA0A0U1RRE5 68 aa4.83□□□□□ -1.64
SCARB2-209ENST00000638409 PHF5AQ7RTV0 110 aaKnown RBP4.83□□□□□ -1.64
SCARB2-209ENST00000638409 TRBV6-8A0A0A6YYG3 113 aa4.83□□□□□ -1.64
SCARB2-209ENST00000638409 LINC01556Q5JQF7 62 aa4.83□□□□□ -1.64
SCARB2-209ENST00000638409 NDUFA1O15239 70 aa4.82□□□□□ -1.64
SCARB2-209ENST00000638409 C5orf38Q86SI9 138 aa4.82□□□□□ -1.64
SCARB2-209ENST00000638409 LINC00643Q86TS7 51 aa4.82□□□□□ -1.64
SCARB2-209ENST00000638409 WFDC10BQ8IUB3 73 aa4.82□□□□□ -1.64
SCARB2-209ENST00000638409 FRAS1Q86XX4 4008 aa4.82□□□□□ -1.64
SCARB2-209ENST00000638409 SDIM1Q6ZPB5 146 aa4.82□□□□□ -1.64
SCARB2-209ENST00000638409 LINC00308Q8TCZ7 52 aa4.82□□□□□ -1.64
SCARB2-209ENST00000638409 ATOX1O00244 68 aa4.82□□□□□ -1.64
SCARB2-209ENST00000638409 DNAH2Q9P225 4427 aa4.81□□□□□ -1.64
SCARB2-209ENST00000638409 TIMM17BO60830 172 aa4.81□□□□□ -1.64
SCARB2-209ENST00000638409 ACYP1P07311 99 aa4.81□□□□□ -1.64
SCARB2-209ENST00000638409 HIST1H4AP62805 103 aaKnown RBP4.81□□□□□ -1.64
SCARB2-209ENST00000638409 C1orf64Q8NEQ6 169 aa4.81□□□□□ -1.64
SCARB2-209ENST00000638409 A0A1B0GW54 56 aa4.81□□□□□ -1.64
SCARB2-209ENST00000638409 KRTAP1-5Q9BYS1 174 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms