RNA–Protein interactions for RNA: ENST00000600236.1

HIF3A-217, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 3

Gene HIF3A, Length 313 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-217ENST00000600236 C22orf24Q9Y442 160 aa6.89□□□□□ -1.31
HIF3A-217ENST00000600236 LRP2P98164 4655 aa6.89□□□□□ -1.31
HIF3A-217ENST00000600236 A4D1N5 150 aa6.88□□□□□ -1.31
HIF3A-217ENST00000600236 KRTAP1-4P0C5Y4 121 aa6.88□□□□□ -1.31
HIF3A-217ENST00000600236 CFC1BP0CG36 223 aa6.88□□□□□ -1.31
HIF3A-217ENST00000600236 CFC1P0CG37 223 aa6.88□□□□□ -1.31
HIF3A-217ENST00000600236 COPS9Q8WXC6 57 aa6.88□□□□□ -1.31
HIF3A-217ENST00000600236 RAB37Q96AX2 223 aa6.88□□□□□ -1.31
HIF3A-217ENST00000600236 K7EP34 96 aa6.87□□□□□ -1.31
HIF3A-217ENST00000600236 FABP2P12104 132 aa6.87□□□□□ -1.31
HIF3A-217ENST00000600236 MRPL55Q7Z7F7 128 aaKnown RBP6.87□□□□□ -1.31
HIF3A-217ENST00000600236 EIF4EBP3O60516 100 aaPredicted RBP6.86□□□□□ -1.31
HIF3A-217ENST00000600236 RPL28P46779 137 aaKnown RBP6.86□□□□□ -1.31
HIF3A-217ENST00000600236 GTF2H5Q6ZYL4 71 aa6.86□□□□□ -1.31
HIF3A-217ENST00000600236 LINC00308Q8TCZ7 52 aa6.86□□□□□ -1.31
HIF3A-217ENST00000600236 PRO1854Q9UHT4 67 aa6.86□□□□□ -1.31
HIF3A-217ENST00000600236 TSPAN13O95857 204 aa6.85□□□□□ -1.31
HIF3A-217ENST00000600236 MEIG1Q5JSS6 88 aa6.85□□□□□ -1.31
HIF3A-217ENST00000600236 BCE1O60756 84 aa6.84□□□□□ -1.31
HIF3A-217ENST00000600236 LYRM7Q5U5X0 104 aa6.84□□□□□ -1.31
HIF3A-217ENST00000600236 NAA38Q9BRA0 125 aaKnown RBP6.84□□□□□ -1.31
HIF3A-217ENST00000600236 SPCS1Q9Y6A9 102 aa6.84□□□□□ -1.31
HIF3A-217ENST00000600236 GAGE10A6NGK3 116 aa6.83□□□□□ -1.32
HIF3A-217ENST00000600236 PRR4Q16378 134 aa6.83□□□□□ -1.32
HIF3A-217ENST00000600236 SOSTDC1Q6X4U4 206 aa6.83□□□□□ -1.32
HIF3A-217ENST00000600236 NKAPP1Q8N9T2 125 aa6.83□□□□□ -1.32
HIF3A-217ENST00000600236 DAND5Q8N907 189 aa6.82□□□□□ -1.32
HIF3A-217ENST00000600236 ERG28Q9UKR5 140 aa6.82□□□□□ -1.32
HIF3A-217ENST00000600236 LOC107984156A0A0G2JMH3 177 aa6.81□□□□□ -1.32
HIF3A-217ENST00000600236 COX17Q14061 63 aa6.81□□□□□ -1.32
HIF3A-217ENST00000600236 ARL17AQ8IVW1 177 aa6.81□□□□□ -1.32
HIF3A-217ENST00000600236 MIR7-3HGQ8N6C7 128 aa6.81□□□□□ -1.32
HIF3A-217ENST00000600236 LINC00167Q96N53 147 aa6.81□□□□□ -1.32
HIF3A-217ENST00000600236 IGLV5-37A0A075B6J1 123 aa6.8□□□□□ -1.32
HIF3A-217ENST00000600236 RPL37AP8A6NKH3 93 aa6.8□□□□□ -1.32
HIF3A-217ENST00000600236 CRYGAP11844 174 aa6.8□□□□□ -1.32
HIF3A-217ENST00000600236 UBE2AP49459 152 aa6.8□□□□□ -1.32
HIF3A-217ENST00000600236 LINC00158P58513 81 aa6.79□□□□□ -1.32
HIF3A-217ENST00000600236 TYMSOSQ8TAI1 123 aa6.79□□□□□ -1.32
HIF3A-217ENST00000600236 TRBV20-1A0A075B6N2 111 aa6.78□□□□□ -1.32
HIF3A-217ENST00000600236 A0A0U1RRA0 63 aa6.78□□□□□ -1.32
HIF3A-217ENST00000600236 NPC2P61916 151 aa6.78□□□□□ -1.32
HIF3A-217ENST00000600236 PFN2P35080 140 aa6.77□□□□□ -1.33
HIF3A-217ENST00000600236 A0A087X002 238 aa6.76□□□□□ -1.33
HIF3A-217ENST00000600236 TRAV13-2A0A0B4J235 113 aa6.76□□□□□ -1.33
HIF3A-217ENST00000600236 SND1-IT1Q9HBX3 110 aa6.76□□□□□ -1.33
HIF3A-217ENST00000600236 IGKV2-28A0A075B6P5 120 aa6.75□□□□□ -1.33
HIF3A-217ENST00000600236 NDUFC2O95298 119 aa6.75□□□□□ -1.33
HIF3A-217ENST00000600236 IGKV2D-28P01615 120 aa6.75□□□□□ -1.33
HIF3A-217ENST00000600236 F8W1H4 67 aa6.74□□□□□ -1.33
HIF3A-217ENST00000600236 TRIAP1O43715 76 aa6.74□□□□□ -1.33
HIF3A-217ENST00000600236 PSMB2P49721 201 aa6.74□□□□□ -1.33
HIF3A-217ENST00000600236 Q1RN00 199 aa6.74□□□□□ -1.33
HIF3A-217ENST00000600236 FAM229BQ4G0N7 80 aa6.74□□□□□ -1.33
HIF3A-217ENST00000600236 PRO0461Q9UI25 63 aa6.74□□□□□ -1.33
HIF3A-217ENST00000600236 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
HIF3A-217ENST00000600236 LPAP08519 4548 aa6.73□□□□□ -1.33
HIF3A-217ENST00000600236 A0A0U1RQV1 116 aa6.73□□□□□ -1.33
HIF3A-217ENST00000600236 H3BMG7 143 aa6.73□□□□□ -1.33
HIF3A-217ENST00000600236 TCL1BO95988 128 aa6.73□□□□□ -1.33
HIF3A-217ENST00000600236 FAM19A1Q7Z5A9 133 aa6.73□□□□□ -1.33
HIF3A-217ENST00000600236 KRTAP13-1Q8IUC0 172 aa6.73□□□□□ -1.33
HIF3A-217ENST00000600236 H7C2G1 150 aa6.72□□□□□ -1.33
HIF3A-217ENST00000600236 COX6CP09669 75 aa6.72□□□□□ -1.33
HIF3A-217ENST00000600236 VPREB1P12018 145 aa6.72□□□□□ -1.33
HIF3A-217ENST00000600236 LINC00337Q8N6G1 96 aa6.72□□□□□ -1.33
HIF3A-217ENST00000600236 TMEM126AQ9H061 195 aa6.72□□□□□ -1.33
HIF3A-217ENST00000600236 SCGB1C2P0DMR2 95 aa6.71□□□□□ -1.34
HIF3A-217ENST00000600236 PRLHP81277 87 aa6.71□□□□□ -1.34
HIF3A-217ENST00000600236 ATXN8Q156A1 80 aa6.71□□□□□ -1.34
HIF3A-217ENST00000600236 LINC00304Q8N9R0 145 aa6.71□□□□□ -1.34
HIF3A-217ENST00000600236 ANAPC11Q9NYG5 84 aa6.71□□□□□ -1.34
HIF3A-217ENST00000600236 LST1O00453 97 aa6.69□□□□□ -1.34
HIF3A-217ENST00000600236 TRBV10-2A0A0K0K1G8 114 aa6.68□□□□□ -1.34
HIF3A-217ENST00000600236 M0R378 163 aa6.68□□□□□ -1.34
HIF3A-217ENST00000600236 SMCPP49901 116 aaPredicted RBP6.68□□□□□ -1.34
HIF3A-217ENST00000600236 KRTAP13-2Q52LG2 175 aa6.68□□□□□ -1.34
HIF3A-217ENST00000600236 HIGD2AQ9BW72 106 aa6.67□□□□□ -1.34
HIF3A-217ENST00000600236 TRACP01848 142 aa6.66□□□□□ -1.34
HIF3A-217ENST00000600236 OCIAD2Q56VL3 154 aa6.66□□□□□ -1.34
HIF3A-217ENST00000600236 Q8NDZ9 215 aa6.66□□□□□ -1.34
HIF3A-217ENST00000600236 SMIM11BQ8TCY0 68 aa6.66□□□□□ -1.34
HIF3A-217ENST00000600236 ZNF706Q9Y5V0 76 aaPredicted RBP6.66□□□□□ -1.34
HIF3A-217ENST00000600236 H3BT86 120 aa6.65□□□□□ -1.34
HIF3A-217ENST00000600236 SLC25A20O43772 301 aa6.65□□□□□ -1.34
HIF3A-217ENST00000600236 CLEC2BQ92478 149 aa6.65□□□□□ -1.34
HIF3A-217ENST00000600236 RETNLBQ9BQ08 111 aa6.65□□□□□ -1.34
HIF3A-217ENST00000600236 C9JAW5 83 aa6.64□□□□□ -1.35
HIF3A-217ENST00000600236 H0YGX0 51 aa6.64□□□□□ -1.35
HIF3A-217ENST00000600236 CDIP1Q9H305 208 aa6.64□□□□□ -1.35
HIF3A-217ENST00000600236 K7ERU9 68 aa6.63□□□□□ -1.35
HIF3A-217ENST00000600236 PRYO14603 147 aa6.63□□□□□ -1.35
HIF3A-217ENST00000600236 IGLV6-57P01721 117 aa6.63□□□□□ -1.35
HIF3A-217ENST00000600236 SPAG11AQ6PDA7 123 aa6.63□□□□□ -1.35
HIF3A-217ENST00000600236 TEN1Q86WV5 123 aa6.63□□□□□ -1.35
HIF3A-217ENST00000600236 MTURNQ8N3F0 131 aa6.63□□□□□ -1.35
HIF3A-217ENST00000600236 IGLV7-46A0A075B6I9 117 aa6.62□□□□□ -1.35
HIF3A-217ENST00000600236 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
HIF3A-217ENST00000600236 ETDBQ3ZM63 59 aa6.62□□□□□ -1.35
HIF3A-217ENST00000600236 C4orf48Q5BLP8 95 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms