RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 A4D1N5 150 aa8.73□□□□□ -1.01
IRF3-223ENST00000599223 NPC2P61916 151 aa8.73□□□□□ -1.01
IRF3-223ENST00000599223 MIR7-3HGQ8N6C7 128 aa8.73□□□□□ -1.01
IRF3-223ENST00000599223 DAND5Q8N907 189 aa8.73□□□□□ -1.01
IRF3-223ENST00000599223 A0A1B0GWB2 263 aa8.72□□□□□ -1.01
IRF3-223ENST00000599223 PRR4Q16378 134 aa8.72□□□□□ -1.01
IRF3-223ENST00000599223 XAGE1AQ9HD64 81 aa8.72□□□□□ -1.01
IRF3-223ENST00000599223 A0A0B4J2C4 111 aa8.71□□□□□ -1.02
IRF3-223ENST00000599223 TAX1BP3O14907 124 aa8.71□□□□□ -1.02
IRF3-223ENST00000599223 C9orf118A6NHY6 69 aa8.7□□□□□ -1.02
IRF3-223ENST00000599223 K7ERJ3 54 aa8.7□□□□□ -1.02
IRF3-223ENST00000599223 ZNF861PO60384 105 aa8.7□□□□□ -1.02
IRF3-223ENST00000599223 RPL13AP40429 203 aaKnown RBP8.7□□□□□ -1.02
IRF3-223ENST00000599223 PRO1854Q9UHT4 67 aa8.7□□□□□ -1.02
IRF3-223ENST00000599223 C22orf24Q9Y442 160 aa8.7□□□□□ -1.02
IRF3-223ENST00000599223 A0A087X002 238 aa8.69□□□□□ -1.02
IRF3-223ENST00000599223 CFC1BP0CG36 223 aa8.69□□□□□ -1.02
IRF3-223ENST00000599223 CFC1P0CG37 223 aa8.69□□□□□ -1.02
IRF3-223ENST00000599223 A0A1B0GV90 55 aa8.68□□□□□ -1.02
IRF3-223ENST00000599223 Q1RN00 199 aa8.68□□□□□ -1.02
IRF3-223ENST00000599223 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
IRF3-223ENST00000599223 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
IRF3-223ENST00000599223 H3BUT2 72 aa8.67□□□□□ -1.02
IRF3-223ENST00000599223 VAMP3Q15836 100 aa8.67□□□□□ -1.02
IRF3-223ENST00000599223 TRAV13-2A0A0B4J235 113 aa8.66□□□□□ -1.02
IRF3-223ENST00000599223 FABP2P12104 132 aa8.66□□□□□ -1.02
IRF3-223ENST00000599223 TSPAN13O95857 204 aa8.65□□□□□ -1.02
IRF3-223ENST00000599223 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
IRF3-223ENST00000599223 PSMB2P49721 201 aa8.64□□□□□ -1.03
IRF3-223ENST00000599223 SOSTDC1Q6X4U4 206 aa8.64□□□□□ -1.03
IRF3-223ENST00000599223 LOC107984156A0A0G2JMH3 177 aa8.63□□□□□ -1.03
IRF3-223ENST00000599223 A0A1W2PPM0 123 aa8.63□□□□□ -1.03
IRF3-223ENST00000599223 H7C2G1 150 aa8.63□□□□□ -1.03
IRF3-223ENST00000599223 BCE1O60756 84 aa8.63□□□□□ -1.03
IRF3-223ENST00000599223 GTF2H5Q6ZYL4 71 aa8.63□□□□□ -1.03
IRF3-223ENST00000599223 ARL17AQ8IVW1 177 aa8.63□□□□□ -1.03
IRF3-223ENST00000599223 RPL37AP8A6NKH3 93 aa8.62□□□□□ -1.03
IRF3-223ENST00000599223 NDUFC2O95298 119 aa8.62□□□□□ -1.03
IRF3-223ENST00000599223 COX6CP09669 75 aa8.62□□□□□ -1.03
IRF3-223ENST00000599223 SCGB1C2P0DMR2 95 aa8.61□□□□□ -1.03
IRF3-223ENST00000599223 NAA38Q9BRA0 125 aaKnown RBP8.61□□□□□ -1.03
IRF3-223ENST00000599223 ANAPC11Q9NYG5 84 aa8.61□□□□□ -1.03
IRF3-223ENST00000599223 FAT4Q6V0I7 4981 aa8.61□□□□□ -1.03
IRF3-223ENST00000599223 GAGE10A6NGK3 116 aa8.6□□□□□ -1.03
IRF3-223ENST00000599223 EIF4EBP3O60516 100 aaPredicted RBP8.6□□□□□ -1.03
IRF3-223ENST00000599223 RPL28P46779 137 aaKnown RBP8.6□□□□□ -1.03
IRF3-223ENST00000599223 KRTAP13-1Q8IUC0 172 aa8.6□□□□□ -1.03
IRF3-223ENST00000599223 OR13C6PQ8NH95 151 aa8.6□□□□□ -1.03
IRF3-223ENST00000599223 LINC00167Q96N53 147 aa8.6□□□□□ -1.03
IRF3-223ENST00000599223 KRTAP13-2Q52LG2 175 aa8.59□□□□□ -1.03
IRF3-223ENST00000599223 SPCS1Q9Y6A9 102 aa8.59□□□□□ -1.03
IRF3-223ENST00000599223 TYMSOSQ8TAI1 123 aa8.58□□□□□ -1.04
IRF3-223ENST00000599223 MUC17Q685J3 4493 aa8.58□□□□□ -1.04
IRF3-223ENST00000599223 CRYGAP11844 174 aa8.57□□□□□ -1.04
IRF3-223ENST00000599223 S100A7L2Q5SY68 101 aa8.57□□□□□ -1.04
IRF3-223ENST00000599223 CBY1Q9Y3M2 126 aa8.57□□□□□ -1.04
IRF3-223ENST00000599223 IGLV5-37A0A075B6J1 123 aa8.56□□□□□ -1.04
IRF3-223ENST00000599223 TRBV20-1A0A075B6N2 111 aa8.56□□□□□ -1.04
IRF3-223ENST00000599223 K7EP34 96 aa8.56□□□□□ -1.04
IRF3-223ENST00000599223 RETNLBQ9BQ08 111 aa8.56□□□□□ -1.04
IRF3-223ENST00000599223 TMEM126AQ9H061 195 aa8.56□□□□□ -1.04
IRF3-223ENST00000599223 IGKV2-28A0A075B6P5 120 aa8.55□□□□□ -1.04
IRF3-223ENST00000599223 TRBV10-2A0A0K0K1G8 114 aa8.55□□□□□ -1.04
IRF3-223ENST00000599223 IGKV2D-28P01615 120 aa8.55□□□□□ -1.04
IRF3-223ENST00000599223 UBE2V1Q13404 147 aa8.55□□□□□ -1.04
IRF3-223ENST00000599223 NCR3O14931 201 aa8.54□□□□□ -1.04
IRF3-223ENST00000599223 LCE2AQ5TA79 106 aaPredicted RBP8.54□□□□□ -1.04
IRF3-223ENST00000599223 LINC00337Q8N6G1 96 aa8.54□□□□□ -1.04
IRF3-223ENST00000599223 KRTAP9-2Q9BYQ4 174 aa8.54□□□□□ -1.04
IRF3-223ENST00000599223 TRIAP1O43715 76 aa8.53□□□□□ -1.04
IRF3-223ENST00000599223 NKAPP1Q8N9T2 125 aa8.53□□□□□ -1.04
IRF3-223ENST00000599223 UBE2AP49459 152 aa8.52□□□□□ -1.05
IRF3-223ENST00000599223 PRLHP81277 87 aa8.52□□□□□ -1.05
IRF3-223ENST00000599223 A0A0U1RQV1 116 aa8.51□□□□□ -1.05
IRF3-223ENST00000599223 M0R378 163 aa8.51□□□□□ -1.05
IRF3-223ENST00000599223 ATXN8Q156A1 80 aa8.51□□□□□ -1.05
IRF3-223ENST00000599223 SNCGO76070 127 aa8.5□□□□□ -1.05
IRF3-223ENST00000599223 FAM229BQ4G0N7 80 aa8.5□□□□□ -1.05
IRF3-223ENST00000599223 LINC00304Q8N9R0 145 aa8.5□□□□□ -1.05
IRF3-223ENST00000599223 Q8NDZ9 215 aa8.5□□□□□ -1.05
IRF3-223ENST00000599223 H0YGX0 51 aa8.49□□□□□ -1.05
IRF3-223ENST00000599223 VPREB1P12018 145 aa8.49□□□□□ -1.05
IRF3-223ENST00000599223 SMIM11BQ8TCY0 68 aa8.49□□□□□ -1.05
IRF3-223ENST00000599223 H3BMG7 143 aa8.47□□□□□ -1.05
IRF3-223ENST00000599223 TCL1BO95988 128 aa8.47□□□□□ -1.05
IRF3-223ENST00000599223 IGLV6-57P01721 117 aa8.46□□□□□ -1.06
IRF3-223ENST00000599223 TRAV23DV6A0A075B6W5 121 aa8.45□□□□□ -1.06
IRF3-223ENST00000599223 TPRXLQ17RH7 258 aa8.45□□□□□ -1.06
IRF3-223ENST00000599223 FAM19A1Q7Z5A9 133 aa8.45□□□□□ -1.06
IRF3-223ENST00000599223 C3orf22Q8N5N4 141 aa8.45□□□□□ -1.06
IRF3-223ENST00000599223 TRBV10-3A0A0K0K1G6 114 aa8.44□□□□□ -1.06
IRF3-223ENST00000599223 F8W1H4 67 aa8.44□□□□□ -1.06
IRF3-223ENST00000599223 LST1O00453 97 aa8.43□□□□□ -1.06
IRF3-223ENST00000599223 DNAL4O96015 105 aa8.43□□□□□ -1.06
IRF3-223ENST00000599223 CLEC2BQ92478 149 aa8.43□□□□□ -1.06
IRF3-223ENST00000599223 IGLV7-46A0A075B6I9 117 aa8.42□□□□□ -1.06
IRF3-223ENST00000599223 C6orf99Q4VX62 202 aa8.42□□□□□ -1.06
IRF3-223ENST00000599223 CDIP1Q9H305 208 aa8.42□□□□□ -1.06
IRF3-223ENST00000599223 TRACP01848 142 aa8.41□□□□□ -1.06
IRF3-223ENST00000599223 TRBV7-6A0A0J9YX20 115 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms