RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 M0QXV9 152 aa3.63□□□□□ -1.83
VPS25-204ENST00000589577 OR13C6PQ8NH95 151 aa3.63□□□□□ -1.83
VPS25-204ENST00000589577 KRTAP4-1Q9BYQ7 146 aa3.63□□□□□ -1.83
VPS25-204ENST00000589577 PPDPFQ9H3Y8 114 aa3.63□□□□□ -1.83
VPS25-204ENST00000589577 TP73-AS1Q9UF72 201 aa3.63□□□□□ -1.83
VPS25-204ENST00000589577 SYNE2Q8WXH0 6885 aaKnown RBP3.63□□□□□ -1.83
VPS25-204ENST00000589577 SSPOA2VEC9 5147 aa3.62□□□□□ -1.83
VPS25-204ENST00000589577 IGLV1-50A0A075B6I6 118 aa3.62□□□□□ -1.83
VPS25-204ENST00000589577 TRAV13-2A0A0B4J235 113 aa3.62□□□□□ -1.83
VPS25-204ENST00000589577 M0R378 163 aa3.62□□□□□ -1.83
VPS25-204ENST00000589577 NDUFC2O95298 119 aa3.62□□□□□ -1.83
VPS25-204ENST00000589577 HINT1P49773 126 aaPredicted RBP3.62□□□□□ -1.83
VPS25-204ENST00000589577 MRPL55Q7Z7F7 128 aaKnown RBP3.62□□□□□ -1.83
VPS25-204ENST00000589577 MUSTN1Q8IVN3 82 aa3.62□□□□□ -1.83
VPS25-204ENST00000589577 RAB37Q96AX2 223 aa3.62□□□□□ -1.83
VPS25-204ENST00000589577 LOC107984156A0A0G2JMH3 177 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 TRBV10-2A0A0K0K1G8 114 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 A6NDN8 102 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 NCR3O14931 201 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 DDTP30046 118 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 C9orf129Q5T035 196 aaKnown RBP3.61□□□□□ -1.83
VPS25-204ENST00000589577 ADAMTSL4-AS1Q5T5F5 129 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 ARL17AQ8IVW1 177 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 CEND1Q8N111 149 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 LITAFQ99732 161 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 TMEM126AQ9H061 195 aa3.61□□□□□ -1.83
VPS25-204ENST00000589577 IGLV5-37A0A075B6J1 123 aa3.6□□□□□ -1.83
VPS25-204ENST00000589577 A4D1N5 150 aa3.6□□□□□ -1.83
VPS25-204ENST00000589577 SNCGO76070 127 aa3.6□□□□□ -1.83
VPS25-204ENST00000589577 TSPAN13O95857 204 aa3.6□□□□□ -1.83
VPS25-204ENST00000589577 VPREB1P12018 145 aa3.6□□□□□ -1.83
VPS25-204ENST00000589577 Q1RN00 199 aa3.6□□□□□ -1.83
VPS25-204ENST00000589577 C2orf91Q6ZV80 131 aa3.6□□□□□ -1.83
VPS25-204ENST00000589577 C22orf24Q9Y442 160 aa3.6□□□□□ -1.83
VPS25-204ENST00000589577 GAGE10A6NGK3 116 aa3.59□□□□□ -1.83
VPS25-204ENST00000589577 H0Y9J4 135 aa3.59□□□□□ -1.83
VPS25-204ENST00000589577 CTAG1AP78358 180 aa3.59□□□□□ -1.83
VPS25-204ENST00000589577 VAMP3Q15836 100 aa3.59□□□□□ -1.83
VPS25-204ENST00000589577 BATFQ16520 125 aa3.59□□□□□ -1.83
VPS25-204ENST00000589577 NHP2Q9NX24 153 aaKnown RBP3.59□□□□□ -1.83
VPS25-204ENST00000589577 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
VPS25-204ENST00000589577 USH2AO75445 5202 aa3.59□□□□□ -1.84
VPS25-204ENST00000589577 FCGBPQ9Y6R7 5405 aaPredicted RBP3.58□□□□□ -1.84
VPS25-204ENST00000589577 IGKV2-28A0A075B6P5 120 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 A0A0B4J2C4 111 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 ETDCA0A1B0GVM5 59 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 A0A1W2PNN7 141 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 FAM168BA1KXE4 195 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 PCP4L1A6NKN8 68 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 PRYO14603 147 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 IGKV2D-28P01615 120 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 COX6CP09669 75 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 RPL13AP40429 203 aaKnown RBP3.58□□□□□ -1.84
VPS25-204ENST00000589577 MT1HP80294 61 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 TPRXLQ17RH7 258 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 LYRM7Q5U5X0 104 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 SOSTDC1Q6X4U4 206 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 DIRC1Q969H9 104 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 CDIP1Q9H305 208 aa3.58□□□□□ -1.84
VPS25-204ENST00000589577 TRAV23DV6A0A075B6W5 121 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 TRBV10-3A0A0K0K1G6 114 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 RPL37AP8A6NKH3 93 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 H7C2G1 150 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 IGLV7-43P04211 117 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 UBE2AP49459 152 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 FXYD2P54710 66 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 KRTAP19-2Q3LHN2 52 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 C1orf137Q5JT78 98 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 PHF5AQ7RTV0 110 aaKnown RBP3.57□□□□□ -1.84
VPS25-204ENST00000589577 LINC00167Q96N53 147 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 RETNLBQ9BQ08 111 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 PRO1854Q9UHT4 67 aa3.57□□□□□ -1.84
VPS25-204ENST00000589577 SLC25A20O43772 301 aa3.56□□□□□ -1.84
VPS25-204ENST00000589577 CRYGAP11844 174 aa3.56□□□□□ -1.84
VPS25-204ENST00000589577 RPL28P46779 137 aaKnown RBP3.56□□□□□ -1.84
VPS25-204ENST00000589577 PSMB2P49721 201 aa3.56□□□□□ -1.84
VPS25-204ENST00000589577 KRTAP10-6P60371 365 aaPredicted RBP3.56□□□□□ -1.84
VPS25-204ENST00000589577 BVES-AS1Q5T3Y7 98 aa3.56□□□□□ -1.84
VPS25-204ENST00000589577 XP32Q5T750 250 aa3.56□□□□□ -1.84
VPS25-204ENST00000589577 KRTAP11-1Q8IUC1 163 aa3.56□□□□□ -1.84
VPS25-204ENST00000589577 ZNF73O43830 326 aaPredicted RBP3.55□□□□□ -1.84
VPS25-204ENST00000589577 IGLV6-57P01721 117 aa3.55□□□□□ -1.84
VPS25-204ENST00000589577 CFC1BP0CG36 223 aa3.55□□□□□ -1.84
VPS25-204ENST00000589577 CFC1P0CG37 223 aa3.55□□□□□ -1.84
VPS25-204ENST00000589577 FAM19A1Q7Z5A9 133 aa3.55□□□□□ -1.84
VPS25-204ENST00000589577 LINC00337Q8N6G1 96 aa3.55□□□□□ -1.84
VPS25-204ENST00000589577 KCNQ1DNQ9H478 68 aa3.55□□□□□ -1.84
VPS25-204ENST00000589577 A0A1B0GWB2 263 aa3.54□□□□□ -1.84
VPS25-204ENST00000589577 EIF4EBP3O60516 100 aaPredicted RBP3.54□□□□□ -1.84
VPS25-204ENST00000589577 BCE1O60756 84 aa3.54□□□□□ -1.84
VPS25-204ENST00000589577 GHRHP01286 108 aa3.54□□□□□ -1.84
VPS25-204ENST00000589577 SCGB1C2P0DMR2 95 aa3.54□□□□□ -1.84
VPS25-204ENST00000589577 COX7BP24311 80 aa3.54□□□□□ -1.84
VPS25-204ENST00000589577 COL5A1-AS1Q5SY13 56 aa3.54□□□□□ -1.84
VPS25-204ENST00000589577 TRBV7-6A0A0J9YX20 115 aa3.53□□□□□ -1.84
VPS25-204ENST00000589577 H0YGX0 51 aa3.53□□□□□ -1.84
VPS25-204ENST00000589577 DNAL4O96015 105 aa3.53□□□□□ -1.84
VPS25-204ENST00000589577 ASB16-AS1Q495Z4 193 aa3.53□□□□□ -1.84
VPS25-204ENST00000589577 C6orf99Q4VX62 202 aa3.53□□□□□ -1.84
VPS25-204ENST00000589577 Q8NDZ9 215 aa3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 323 ms