RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	NHS	Q6T4R5	1651 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	ANKRD50	Q9ULJ7	1429 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	CIC	Q96RK0	1608 aa	Predicted RBP	0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	GVINP1	Q7Z2Y8	2422 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	PIEZO2	Q9H5I5	2752 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	UGGT1	Q9NYU2	1555 aa		0.45	□□□□□ -2.34
UBR1-209	ENST00000569243	LRRC37A	A6NMS7	1700 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	QSER1	Q2KHR3	1735 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	CPS1	P31327	1500 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	AHNAK	Q09666	5890 aa	Known RBP	0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	ITSN2	Q9NZM3	1697 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	TSC2	P49815	1807 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243		I3L3M4	83 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	RPL38	P63173	70 aa	Known RBP	0.44	□□□□□ -2.34
UBR1-209	ENST00000569243		Q8IZM0	81 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	DEFB123	Q8N688	67 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	MRPL34	Q9BQ48	92 aa	Known RBP	0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	UBL5	Q9BZL1	73 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	APLN	Q9ULZ1	77 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	FRAS1	Q86XX4	4008 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	POLQ	O75417	2590 aa		0.44	□□□□□ -2.34
UBR1-209	ENST00000569243	MROH2A	A6NES4	1674 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	ALS2	Q96Q42	1657 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	ALMS1	Q8TCU4	4167 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	LOC730098	B7Z3J9	87 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	NDUFA3	O95167	84 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	KLK9	Q2XQG4	91 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	NWD1	Q149M9	1564 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	REV3L	O60673	3130 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	ABCC6	O95255	1503 aa		0.43	□□□□□ -2.34
UBR1-209	ENST00000569243	PIEZO1	Q92508	2521 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	KNL1	Q8NG31	2342 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243		M0R1W7	72 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	SPRR1A	P35321	89 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	CRIP1	P50238	77 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	H1FX-AS1	Q4G0G2	97 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	NCBP2-AS2	Q69YL0	99 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	DEFB105A	Q8NG35	78 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	USMG5	Q96IX5	58 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	PRO3102	Q9H379	93 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	CLASP1	Q7Z460	1538 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	ZNF292	O60281	2723 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	RNF17	Q9BXT8	1623 aa	Known RBP	0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	MEGF8	Q7Z7M0	2845 aa		0.42	□□□□□ -2.34
UBR1-209	ENST00000569243	TJP1	Q07157	1748 aa		0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	AKAP6	Q13023	2319 aa		0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	TNRC6C	Q9HCJ0	1690 aa	Known RBP	0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	ETDC	A0A1B0GVM5	59 aa		0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	COX6B1	P14854	86 aa		0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	SPRR1B	P22528	89 aa		0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	KCNQ1DN	Q9H478	68 aa		0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	ABCA12	Q86UK0	2595 aa		0.41	□□□□□ -2.34
UBR1-209	ENST00000569243	SYCP2	Q9BX26	1530 aa		0.4	□□□□□ -2.35
UBR1-209	ENST00000569243	FAT2	Q9NYQ8	4349 aa		0.4	□□□□□ -2.35
UBR1-209	ENST00000569243		H0YAA0	97 aa		0.4	□□□□□ -2.35
UBR1-209	ENST00000569243	CDKN2A-AS1	Q9UH64	79 aa		0.4	□□□□□ -2.35
UBR1-209	ENST00000569243	DDX60L	Q5H9U9	1706 aa	Known RBP	0.4	□□□□□ -2.35
UBR1-209	ENST00000569243	BDP1	A6H8Y1	2624 aa		0.4	□□□□□ -2.35
UBR1-209	ENST00000569243	PKDREJ	Q9NTG1	2253 aa		0.4	□□□□□ -2.35
UBR1-209	ENST00000569243	FANCD2	Q9BXW9	1451 aa		0.4	□□□□□ -2.35
UBR1-209	ENST00000569243	BIVM-ERCC5	R4GMW8	1640 aa		0.39	□□□□□ -2.35
UBR1-209	ENST00000569243	BPTF	Q12830	3046 aa		0.39	□□□□□ -2.35
UBR1-209	ENST00000569243	CCL22	O00626	93 aa		0.39	□□□□□ -2.35
UBR1-209	ENST00000569243	LINC00158	P58513	81 aa		0.39	□□□□□ -2.35
UBR1-209	ENST00000569243	WFDC13	Q8IUB5	93 aa		0.39	□□□□□ -2.35
UBR1-209	ENST00000569243	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.39	□□□□□ -2.35
UBR1-209	ENST00000569243	LY75	O60449	1722 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	C4A	P0C0L4	1744 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	C4B	P0C0L5	1744 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	CHD9	Q3L8U1	2897 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	TPR	P12270	2363 aa	Known RBP	0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	WNK2	Q9Y3S1	2297 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	CROCC2	H7BZ55	1655 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	C3	P01024	1663 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	MAST1	Q9Y2H9	1570 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	DEFB131B	A0A096LNP1	70 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	IGIP	A6NJ69	53 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243		Q5VSD8	79 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	NMES1	Q9C002	83 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	AGL	P35573	1532 aa		0.38	□□□□□ -2.35
UBR1-209	ENST00000569243	PRKDC	P78527	4128 aa	Known RBP	0.37	□□□□□ -2.35
UBR1-209	ENST00000569243	PDE4DIP	Q5VU43	2346 aa		0.37	□□□□□ -2.35
UBR1-209	ENST00000569243	SNRPGP15	A8MWD9	76 aa		0.37	□□□□□ -2.35
UBR1-209	ENST00000569243	MRPL33	O75394	65 aa	Known RBP	0.37	□□□□□ -2.35
UBR1-209	ENST00000569243	PRH1	P02810	166 aa		0.37	□□□□□ -2.35
UBR1-209	ENST00000569243	DEFB114	Q30KQ6	69 aa		0.37	□□□□□ -2.35
UBR1-209	ENST00000569243	EFCAB6	Q5THR3	1501 aa		0.37	□□□□□ -2.35
UBR1-209	ENST00000569243	LYST	Q99698	3801 aa		0.37	□□□□□ -2.35
UBR1-209	ENST00000569243	SPTA1	P02549	2419 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	ABCA2	Q9BZC7	2435 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	IGF2R	P11717	2491 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	CHD6	Q8TD26	2715 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	IAPP	P10997	89 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	DEFB109B	Q30KR1	87 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	COX6B2	Q6YFQ2	88 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	NCOR1	O75376	2440 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	CELSR2	Q9HCU4	2923 aa		0.36	□□□□□ -2.35
UBR1-209	ENST00000569243	ATR	Q13535	2644 aa		0.35	□□□□□ -2.35
UBR1-209	ENST00000569243	ABCA5	Q8WWZ7	1642 aa		0.35	□□□□□ -2.35

Retrieved 100 of 20,778 RNA–protein pairs in 963.5 ms