RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 LRRC9Q6ZRR7 1453 aa-1.19□□□□□ -2.6
CYLD-213ENST00000568744 LRRC7Q96NW7 1537 aa-1.2□□□□□ -2.6
CYLD-213ENST00000568744 NDUFA3O95167 84 aa-1.2□□□□□ -2.6
CYLD-213ENST00000568744 MT4P47944 62 aa-1.2□□□□□ -2.6
CYLD-213ENST00000568744 ALKQ9UM73 1620 aa-1.21□□□□□ -2.6
CYLD-213ENST00000568744 PKD1P98161 4303 aa-1.21□□□□□ -2.6
CYLD-213ENST00000568744 PRRC2CQ9Y520 2896 aaKnown RBP-1.21□□□□□ -2.6
CYLD-213ENST00000568744 MYH4Q9Y623 1939 aa-1.22□□□□□ -2.6
CYLD-213ENST00000568744 ATP10BO94823 1461 aa-1.22□□□□□ -2.6
CYLD-213ENST00000568744 A0A1B0GUT8 65 aa-1.22□□□□□ -2.6
CYLD-213ENST00000568744 H3BNG1 76 aa-1.22□□□□□ -2.6
CYLD-213ENST00000568744 HMGN2P05204 90 aaKnown RBP-1.22□□□□□ -2.6
CYLD-213ENST00000568744 GAFA1Q96PS6 74 aa-1.22□□□□□ -2.6
CYLD-213ENST00000568744 HIVEP1P15822 2718 aa-1.22□□□□□ -2.6
CYLD-213ENST00000568744 TNRC18O15417 2968 aaPredicted RBP-1.22□□□□□ -2.6
CYLD-213ENST00000568744 PEG3Q9GZU2 1588 aa-1.22□□□□□ -2.61
CYLD-213ENST00000568744 RGPD8O14715 1765 aaPredicted RBP-1.23□□□□□ -2.61
CYLD-213ENST00000568744 RGPD5Q99666 1765 aa-1.23□□□□□ -2.61
CYLD-213ENST00000568744 IQCF6A8MYZ5 107 aa-1.23□□□□□ -2.61
CYLD-213ENST00000568744 M0R143 59 aa-1.23□□□□□ -2.61
CYLD-213ENST00000568744 SMIM11AP58511 58 aa-1.23□□□□□ -2.61
CYLD-213ENST00000568744 PLGLAQ15195 96 aa-1.23□□□□□ -2.61
CYLD-213ENST00000568744 HERC2O95714 4834 aa-1.24□□□□□ -2.61
CYLD-213ENST00000568744 C4AP0C0L4 1744 aa-1.24□□□□□ -2.61
CYLD-213ENST00000568744 C4BP0C0L5 1744 aa-1.24□□□□□ -2.61
CYLD-213ENST00000568744 TACC2O95359 2948 aa-1.24□□□□□ -2.61
CYLD-213ENST00000568744 MT1AP04731 61 aa-1.25□□□□□ -2.61
CYLD-213ENST00000568744 PEA15Q15121 130 aa-1.25□□□□□ -2.61
CYLD-213ENST00000568744 ATP7BP35670 1465 aa-1.25□□□□□ -2.61
CYLD-213ENST00000568744 FASNP49327 2511 aaKnown RBP-1.26□□□□□ -2.61
CYLD-213ENST00000568744 CYB5AP00167 134 aa-1.26□□□□□ -2.61
CYLD-213ENST00000568744 DNAH6Q9C0G6 4158 aa-1.26□□□□□ -2.61
CYLD-213ENST00000568744 TEP1Q99973 2627 aaKnown RBP-1.27□□□□□ -2.61
CYLD-213ENST00000568744 GYPAP02724 150 aa-1.27□□□□□ -2.61
CYLD-213ENST00000568744 TNRC6CQ9HCJ0 1690 aaKnown RBP-1.27□□□□□ -2.61
CYLD-213ENST00000568744 RGPD1P0DJD0 1748 aa-1.27□□□□□ -2.61
CYLD-213ENST00000568744 ANKHD1Q8IWZ3 2542 aaKnown RBP-1.27□□□□□ -2.61
CYLD-213ENST00000568744 STARD9Q9P2P6 4700 aa-1.28□□□□□ -2.61
CYLD-213ENST00000568744 ABCC10Q5T3U5 1492 aa-1.28□□□□□ -2.61
CYLD-213ENST00000568744 MYO3AQ8NEV4 1616 aa-1.29□□□□□ -2.62
CYLD-213ENST00000568744 BAZ1AQ9NRL2 1556 aaPredicted RBP-1.29□□□□□ -2.62
CYLD-213ENST00000568744 C20orf78Q9BR46 151 aa-1.29□□□□□ -2.62
CYLD-213ENST00000568744 NBPF19A0A087WUL8 3843 aa-1.29□□□□□ -2.62
CYLD-213ENST00000568744 HTTP42858 3142 aa-1.3□□□□□ -2.62
CYLD-213ENST00000568744 NEXMIFQ5QGS0 1516 aa-1.3□□□□□ -2.62
CYLD-213ENST00000568744 USP9YO00507 2555 aaPredicted RBP-1.31□□□□□ -2.62
CYLD-213ENST00000568744 ANKRD26Q9UPS8 1709 aa-1.31□□□□□ -2.62
CYLD-213ENST00000568744 TRAV21A0A0B4J279 112 aa-1.31□□□□□ -2.62
CYLD-213ENST00000568744 C9orf92A6NGG3 77 aa-1.31□□□□□ -2.62
CYLD-213ENST00000568744 WFDC9Q8NEX5 89 aa-1.31□□□□□ -2.62
CYLD-213ENST00000568744 NEBP20929 6669 aa-1.31□□□□□ -2.62
CYLD-213ENST00000568744 FAT3Q8TDW7 4589 aa-1.32□□□□□ -2.62
CYLD-213ENST00000568744 SUPT6HQ7KZ85 1726 aaKnown RBP-1.32□□□□□ -2.62
CYLD-213ENST00000568744 SNHG12Q9BXW3 62 aa-1.32□□□□□ -2.62
CYLD-213ENST00000568744 ANKRD50Q9ULJ7 1429 aa-1.32□□□□□ -2.62
CYLD-213ENST00000568744 PRO3102Q9H379 93 aa-1.33□□□□□ -2.62
CYLD-213ENST00000568744 TIAM2Q8IVF5 1701 aa-1.33□□□□□ -2.62
CYLD-213ENST00000568744 CEP162Q5TB80 1403 aa-1.33□□□□□ -2.62
CYLD-213ENST00000568744 DNAH9Q9NYC9 4486 aa-1.34□□□□□ -2.62
CYLD-213ENST00000568744 LYSTQ99698 3801 aa-1.34□□□□□ -2.62
CYLD-213ENST00000568744 C3orf79P0CE67 100 aa-1.34□□□□□ -2.62
CYLD-213ENST00000568744 VPS8Q8N3P4 1428 aa-1.34□□□□□ -2.62
CYLD-213ENST00000568744 UBR1Q8IWV7 1749 aa-1.35□□□□□ -2.62
CYLD-213ENST00000568744 USH2AO75445 5202 aa-1.35□□□□□ -2.63
CYLD-213ENST00000568744 ITPR3Q14573 2671 aa-1.35□□□□□ -2.63
CYLD-213ENST00000568744 CUBNO60494 3623 aa-1.35□□□□□ -2.63
CYLD-213ENST00000568744 AKAP12Q02952 1782 aa-1.36□□□□□ -2.63
CYLD-213ENST00000568744 MYMXA0A1B0GTQ4 84 aa-1.36□□□□□ -2.63
CYLD-213ENST00000568744 POLR1AO95602 1720 aaPredicted RBP-1.36□□□□□ -2.63
CYLD-213ENST00000568744 S100A8P05109 93 aa-1.36□□□□□ -2.63
CYLD-213ENST00000568744 LINC00158P58513 81 aa-1.36□□□□□ -2.63
CYLD-213ENST00000568744 PKIAP61925 76 aa-1.36□□□□□ -2.63
CYLD-213ENST00000568744 ZZEF1O43149 2961 aa-1.36□□□□□ -2.63
CYLD-213ENST00000568744 ANKRD11Q6UB99 2663 aaPredicted RBP-1.36□□□□□ -2.63
CYLD-213ENST00000568744 DMXL1Q9Y485 3027 aa-1.37□□□□□ -2.63
CYLD-213ENST00000568744 MYO18BQ8IUG5 2567 aa-1.37□□□□□ -2.63
CYLD-213ENST00000568744 USP32Q8NFA0 1604 aa-1.37□□□□□ -2.63
CYLD-213ENST00000568744 UBR4Q5T4S7 5183 aa-1.37□□□□□ -2.63
CYLD-213ENST00000568744 PLXNC1O60486 1568 aa-1.38□□□□□ -2.63
CYLD-213ENST00000568744 NWD1Q149M9 1564 aa-1.38□□□□□ -2.63
CYLD-213ENST00000568744 SCN11AQ9UI33 1791 aa-1.39□□□□□ -2.63
CYLD-213ENST00000568744 NESP48681 1621 aa-1.39□□□□□ -2.63
CYLD-213ENST00000568744 LTN1O94822 1766 aa-1.39□□□□□ -2.63
CYLD-213ENST00000568744 MTORP42345 2549 aa-1.39□□□□□ -2.63
CYLD-213ENST00000568744 AKAP9Q99996 3911 aa-1.4□□□□□ -2.63
CYLD-213ENST00000568744 MUC17Q685J3 4493 aa-1.41□□□□□ -2.63
CYLD-213ENST00000568744 RGPD3A6NKT7 1758 aaPredicted RBP-1.41□□□□□ -2.63
CYLD-213ENST00000568744 RGPD4Q7Z3J3 1758 aa-1.41□□□□□ -2.63
CYLD-213ENST00000568744 PLIN4Q96Q06 1357 aa-1.41□□□□□ -2.64
CYLD-213ENST00000568744 NDUFB1O75438 58 aa-1.41□□□□□ -2.64
CYLD-213ENST00000568744 PKHD1L1Q86WI1 4243 aa-1.41□□□□□ -2.64
CYLD-213ENST00000568744 VPS13DQ5THJ4 4388 aa-1.41□□□□□ -2.64
CYLD-213ENST00000568744 DOPEY1Q5JWR5 2465 aa-1.42□□□□□ -2.64
CYLD-213ENST00000568744 ACACAQ13085 2346 aa-1.42□□□□□ -2.64
CYLD-213ENST00000568744 CEP170BQ9Y4F5 1589 aaPredicted RBP-1.42□□□□□ -2.64
CYLD-213ENST00000568744 GCN1Q92616 2671 aaKnown RBP-1.43□□□□□ -2.64
CYLD-213ENST00000568744 DOT1LQ8TEK3 1739 aa-1.43□□□□□ -2.64
CYLD-213ENST00000568744 CEBPZOSA8MTT3 80 aa-1.43□□□□□ -2.64
CYLD-213ENST00000568744 SNRPFP62306 86 aaKnown RBP-1.43□□□□□ -2.64
CYLD-213ENST00000568744 LAMA1P25391 3075 aa-1.43□□□□□ -2.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms