RNA–Protein interactions for RNA: ENST00000568744.1

CYLD-213, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 2

Gene CYLD, Length 370 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-213ENST00000568744 AEBP2Q6ZN18 517 aaPredicted RBP27.41■■□□□ 1.98
CYLD-213ENST00000568744 CHIC1Q5VXU3 224 aa27.1■■□□□ 1.93
CYLD-213ENST00000568744 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
CYLD-213ENST00000568744 SENP3Q9H4L4 574 aaPredicted RBP23.23■■□□□ 1.31
CYLD-213ENST00000568744 PLPPR3Q6T4P5 718 aa22.18■■□□□ 1.14
CYLD-213ENST00000568744 FOXD1Q16676 465 aa21.52■■□□□ 1.04
CYLD-213ENST00000568744 ADRA2BP18089 450 aa21.02■□□□□ 0.96
CYLD-213ENST00000568744 PPP6R1Q9UPN7 881 aa20.96■□□□□ 0.95
CYLD-213ENST00000568744 PIAS4Q8N2W9 510 aaPredicted RBP20.44■□□□□ 0.86
CYLD-213ENST00000568744 MSH5O43196 834 aa19.73■□□□□ 0.75
CYLD-213ENST00000568744 POTEDQ86YR6 584 aa19.63■□□□□ 0.73
CYLD-213ENST00000568744 PPP4R3CPQ6ZMV5 832 aa19.61■□□□□ 0.73
CYLD-213ENST00000568744 KCNA4P22459 653 aa19.54■□□□□ 0.72
CYLD-213ENST00000568744 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
CYLD-213ENST00000568744 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
CYLD-213ENST00000568744 MAPK8IP2Q13387 824 aaPredicted RBP18.98■□□□□ 0.63
CYLD-213ENST00000568744 CNKSR2Q8WXI2 1034 aa18.96■□□□□ 0.63
CYLD-213ENST00000568744 NPM3O75607 178 aaKnown RBP18.89■□□□□ 0.61
CYLD-213ENST00000568744 SLC4A1APQ9BWU0 796 aaKnown RBP18.7■□□□□ 0.58
CYLD-213ENST00000568744 EHMT2Q96KQ7 1210 aa18.63■□□□□ 0.57
CYLD-213ENST00000568744 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
CYLD-213ENST00000568744 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
CYLD-213ENST00000568744 HOXD11P31277 338 aaPredicted RBP18.28■□□□□ 0.52
CYLD-213ENST00000568744 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
CYLD-213ENST00000568744 DNAJC5BQ9UF47 199 aa18.1■□□□□ 0.49
CYLD-213ENST00000568744 ZBTB22O15209 634 aa17.95■□□□□ 0.46
CYLD-213ENST00000568744 DCAF8L1A6NGE4 600 aa17.94■□□□□ 0.46
CYLD-213ENST00000568744 FOXD4L1Q9NU39 408 aa17.88■□□□□ 0.45
CYLD-213ENST00000568744 SLC4A2P04920 1241 aa17.73■□□□□ 0.43
CYLD-213ENST00000568744 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.58■□□□□ 0.4
CYLD-213ENST00000568744 MYCNP04198 464 aaPredicted RBP17.45■□□□□ 0.38
CYLD-213ENST00000568744 U3KPZ7 1027 aaPredicted RBP17.25■□□□□ 0.35
CYLD-213ENST00000568744 ATXN8OSP0DMR3 200 aa17.16■□□□□ 0.34
CYLD-213ENST00000568744 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.15■□□□□ 0.34
CYLD-213ENST00000568744 HNRNPUL2Q1KMD3 747 aaKnown RBP17.15■□□□□ 0.34
CYLD-213ENST00000568744 SAMD1Q6SPF0 538 aaPredicted RBP17.11■□□□□ 0.33
CYLD-213ENST00000568744 CACNB1Q02641 598 aaPredicted RBP17.01■□□□□ 0.31
CYLD-213ENST00000568744 ATF5Q9Y2D1 282 aaPredicted RBP16.97■□□□□ 0.31
CYLD-213ENST00000568744 APLP2Q06481 763 aa16.91■□□□□ 0.3
CYLD-213ENST00000568744 RNF39Q9H2S5 420 aa16.9■□□□□ 0.3
CYLD-213ENST00000568744 C1QBPQ07021 282 aaKnown RBP16.72■□□□□ 0.27
CYLD-213ENST00000568744 SPINK5Q9NQ38 1064 aaPredicted RBP16.7■□□□□ 0.26
CYLD-213ENST00000568744 TRHP20396 242 aaPredicted RBP16.69■□□□□ 0.26
CYLD-213ENST00000568744 CAPN15O75808 1086 aa16.68■□□□□ 0.26
CYLD-213ENST00000568744 ZNF219Q9P2Y4 722 aaPredicted RBP16.68■□□□□ 0.26
CYLD-213ENST00000568744 FKBP8Q14318 412 aa16.45■□□□□ 0.22
CYLD-213ENST00000568744 POLA2Q14181 598 aa16.44■□□□□ 0.22
CYLD-213ENST00000568744 ABCB7O75027 752 aa16.4■□□□□ 0.22
CYLD-213ENST00000568744 FBLN2P98095 1184 aa16.29■□□□□ 0.2
CYLD-213ENST00000568744 DSG3P32926 999 aa16.22■□□□□ 0.19
CYLD-213ENST00000568744 MKRN4PQ13434 485 aaPredicted RBP16.22■□□□□ 0.19
CYLD-213ENST00000568744 ZBTB12Q9Y330 459 aaPredicted RBP16.15■□□□□ 0.18
CYLD-213ENST00000568744 SPDYE4A6NLX3 237 aa16.08■□□□□ 0.16
CYLD-213ENST00000568744 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
CYLD-213ENST00000568744 ZNF692Q9BU19 519 aaPredicted RBP15.79■□□□□ 0.12
CYLD-213ENST00000568744 SPDYE2BA6NHP3 402 aa15.74■□□□□ 0.11
CYLD-213ENST00000568744 SPDYE6P0CI01 402 aa15.74■□□□□ 0.11
CYLD-213ENST00000568744 SPDYE2Q495Y8 402 aa15.74■□□□□ 0.11
CYLD-213ENST00000568744 FBXO3Q9UK99 471 aa15.73■□□□□ 0.11
CYLD-213ENST00000568744 PROM2Q8N271 834 aa15.72■□□□□ 0.11
CYLD-213ENST00000568744 SSUH2Q9Y2M2 353 aa15.61■□□□□ 0.09
CYLD-213ENST00000568744 PABPN1Q86U42 306 aaKnown RBP eCLIP15.59■□□□□ 0.09
CYLD-213ENST00000568744 AMER1Q5JTC6 1135 aaPredicted RBP15.54■□□□□ 0.08
CYLD-213ENST00000568744 RTN4Q9NQC3 1192 aaKnown RBP15.52■□□□□ 0.08
CYLD-213ENST00000568744 VASPP50552 380 aaPredicted RBP15.51■□□□□ 0.07
CYLD-213ENST00000568744 RBM42Q9BTD8 480 aaKnown RBP15.47■□□□□ 0.07
CYLD-213ENST00000568744 STAG3Q9UJ98 1225 aa15.38■□□□□ 0.05
CYLD-213ENST00000568744 POTEHQ6S545 545 aa15.34■□□□□ 0.05
CYLD-213ENST00000568744 AKT1S1Q96B36 256 aa15.33■□□□□ 0.04
CYLD-213ENST00000568744 IFNLR1Q8IU57 520 aaPredicted RBP15.3■□□□□ 0.04
CYLD-213ENST00000568744 PLCD3Q8N3E9 789 aa15.3■□□□□ 0.04
CYLD-213ENST00000568744 KLHL34Q8N239 644 aa15.27■□□□□ 0.04
CYLD-213ENST00000568744 MIER1Q8N108 512 aa15.26■□□□□ 0.03
CYLD-213ENST00000568744 SPDYE1Q8NFV5 336 aaPredicted RBP15.23■□□□□ 0.03
CYLD-213ENST00000568744 CLEC11AQ9Y240 323 aa15.23■□□□□ 0.03
CYLD-213ENST00000568744 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
CYLD-213ENST00000568744 PLEKHG5O94827 1062 aa15.17■□□□□ 0.02
CYLD-213ENST00000568744 PRR29P0C7W0 189 aa15.1■□□□□ 0.01
CYLD-213ENST00000568744 SPOCK2Q92563 424 aa15.1■□□□□ 0.01
CYLD-213ENST00000568744 PITPNM1O00562 1244 aa15.03■□□□□ -0
CYLD-213ENST00000568744 ZBTB47Q9UFB7 747 aaPredicted RBP15.03■□□□□ -0
CYLD-213ENST00000568744 CREBZFQ9NS37 354 aa14.91□□□□□ -0.02
CYLD-213ENST00000568744 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
CYLD-213ENST00000568744 PKD2Q13563 968 aa14.9□□□□□ -0.02
CYLD-213ENST00000568744 CIZ1Q9ULV3 898 aaPredicted RBP14.89□□□□□ -0.03
CYLD-213ENST00000568744 ECM2O94769 699 aaPredicted RBP14.83□□□□□ -0.04
CYLD-213ENST00000568744 CHADLQ6NUI6 762 aa14.79□□□□□ -0.04
CYLD-213ENST00000568744 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
CYLD-213ENST00000568744 MNX1P50219 401 aaPredicted RBP14.74□□□□□ -0.05
CYLD-213ENST00000568744 NPM1P06748 294 aaKnown RBP eCLIP14.73□□□□□ -0.05
CYLD-213ENST00000568744 NUBP1P53384 320 aa14.73□□□□□ -0.05
CYLD-213ENST00000568744 GSE1Q14687 1217 aa14.71□□□□□ -0.05
CYLD-213ENST00000568744 CHRDL2Q6WN34 429 aa14.7□□□□□ -0.06
CYLD-213ENST00000568744 PRKAR2AP13861 404 aaKnown RBP14.69□□□□□ -0.06
CYLD-213ENST00000568744 FAM212AQ96EL1 285 aa14.68□□□□□ -0.06
CYLD-213ENST00000568744 RGL2O15211 777 aa14.65□□□□□ -0.06
CYLD-213ENST00000568744 RASEFQ8IZ41 740 aa14.64□□□□□ -0.07
CYLD-213ENST00000568744 FXR2P51116 673 aaKnown RBP eCLIP14.63□□□□□ -0.07
CYLD-213ENST00000568744 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
CYLD-213ENST00000568744 FARP1Q9Y4F1 1045 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms