RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 GVINP1Q7Z2Y8 2422 aa0.34□□□□□ -2.36
UBR1-205ENST00000564540 AKAP6Q13023 2319 aa0.33□□□□□ -2.36
UBR1-205ENST00000564540 TIAM2Q8IVF5 1701 aa0.33□□□□□ -2.36
UBR1-205ENST00000564540 H3BVH4 76 aa0.33□□□□□ -2.36
UBR1-205ENST00000564540 NDUFA4O00483 81 aa0.33□□□□□ -2.36
UBR1-205ENST00000564540 NDUFA3O95167 84 aa0.33□□□□□ -2.36
UBR1-205ENST00000564540 CDKN2A-AS1Q9UH64 79 aa0.33□□□□□ -2.36
UBR1-205ENST00000564540 CFAP43Q8NDM7 1665 aa0.33□□□□□ -2.36
UBR1-205ENST00000564540 IGF2RP11717 2491 aa0.32□□□□□ -2.36
UBR1-205ENST00000564540 DNMBPQ6XZF7 1577 aa0.32□□□□□ -2.36
UBR1-205ENST00000564540 COX6B2Q6YFQ2 88 aa0.32□□□□□ -2.36
UBR1-205ENST00000564540 ZFYVE26Q68DK2 2539 aa0.32□□□□□ -2.36
UBR1-205ENST00000564540 DUOX2Q9NRD8 1548 aa0.32□□□□□ -2.36
UBR1-205ENST00000564540 UNC79Q9P2D8 2635 aa0.32□□□□□ -2.36
UBR1-205ENST00000564540 LRP1Q07954 4544 aaKnown RBP0.32□□□□□ -2.36
UBR1-205ENST00000564540 ANKRD50Q9ULJ7 1429 aa0.31□□□□□ -2.36
UBR1-205ENST00000564540 TNRC6CQ9HCJ0 1690 aaKnown RBP0.31□□□□□ -2.36
UBR1-205ENST00000564540 RICTORQ6R327 1708 aa0.31□□□□□ -2.36
UBR1-205ENST00000564540 WFDC13Q8IUB5 93 aa0.31□□□□□ -2.36
UBR1-205ENST00000564540 HILPDAQ9Y5L2 63 aa0.31□□□□□ -2.36
UBR1-205ENST00000564540 CHD6Q8TD26 2715 aa0.31□□□□□ -2.36
UBR1-205ENST00000564540 BSNQ9UPA5 3926 aa0.3□□□□□ -2.36
UBR1-205ENST00000564540 DIP2AQ14689 1571 aa0.3□□□□□ -2.36
UBR1-205ENST00000564540 NESP48681 1621 aa0.3□□□□□ -2.36
UBR1-205ENST00000564540 PLCH1Q4KWH8 1693 aa0.3□□□□□ -2.36
UBR1-205ENST00000564540 LMTK2Q8IWU2 1503 aa0.29□□□□□ -2.36
UBR1-205ENST00000564540 CDC42BPGQ6DT37 1551 aa0.29□□□□□ -2.36
UBR1-205ENST00000564540 PRM1P04553 51 aa0.29□□□□□ -2.36
UBR1-205ENST00000564540 NAV2Q8IVL1 2488 aa0.29□□□□□ -2.36
UBR1-205ENST00000564540 KMT2DO14686 5537 aa0.28□□□□□ -2.36
UBR1-205ENST00000564540 TNXBP22105 4242 aa0.28□□□□□ -2.36
UBR1-205ENST00000564540 FAT2Q9NYQ8 4349 aa0.28□□□□□ -2.36
UBR1-205ENST00000564540 EIF2AK4Q9P2K8 1649 aaKnown RBP0.28□□□□□ -2.36
UBR1-205ENST00000564540 PARP4Q9UKK3 1724 aaKnown RBP0.28□□□□□ -2.36
UBR1-205ENST00000564540 NCOR1O75376 2440 aa0.28□□□□□ -2.36
UBR1-205ENST00000564540 ASXL1Q8IXJ9 1541 aa0.28□□□□□ -2.37
UBR1-205ENST00000564540 ADAMTS12P58397 1594 aa0.28□□□□□ -2.37
UBR1-205ENST00000564540 CELSR1Q9NYQ6 3014 aa0.27□□□□□ -2.37
UBR1-205ENST00000564540 ITSN1Q15811 1721 aa0.27□□□□□ -2.37
UBR1-205ENST00000564540 FAT4Q6V0I7 4981 aa0.27□□□□□ -2.37
UBR1-205ENST00000564540 ENHOQ6UWT2 76 aa0.27□□□□□ -2.37
UBR1-205ENST00000564540 ZC3H13Q5T200 1668 aaKnown RBP0.27□□□□□ -2.37
UBR1-205ENST00000564540 C4AP0C0L4 1744 aa0.27□□□□□ -2.37
UBR1-205ENST00000564540 C4BP0C0L5 1744 aa0.27□□□□□ -2.37
UBR1-205ENST00000564540 CNOT1A5YKK6 2376 aaKnown RBP0.26□□□□□ -2.37
UBR1-205ENST00000564540 ATRQ13535 2644 aa0.26□□□□□ -2.37
UBR1-205ENST00000564540 PRO3102Q9H379 93 aa0.26□□□□□ -2.37
UBR1-205ENST00000564540 ABCA9Q8IUA7 1624 aa0.26□□□□□ -2.37
UBR1-205ENST00000564540 MADDQ8WXG6 1647 aa0.26□□□□□ -2.37
UBR1-205ENST00000564540 WIZO95785 1651 aa0.26□□□□□ -2.37
UBR1-205ENST00000564540 PRKDCP78527 4128 aaKnown RBP0.26□□□□□ -2.37
UBR1-205ENST00000564540 PKD1L1Q8TDX9 2849 aa0.25□□□□□ -2.37
UBR1-205ENST00000564540 CICQ96RK0 1608 aaPredicted RBP0.25□□□□□ -2.37
UBR1-205ENST00000564540 LOC730098B7Z3J9 87 aa0.25□□□□□ -2.37
UBR1-205ENST00000564540 C3orf79P0CE67 100 aa0.25□□□□□ -2.37
UBR1-205ENST00000564540 LINC00158P58513 81 aa0.25□□□□□ -2.37
UBR1-205ENST00000564540 ATXN8Q156A1 80 aa0.25□□□□□ -2.37
UBR1-205ENST00000564540 HRNRQ86YZ3 2850 aaPredicted RBP0.25□□□□□ -2.37
UBR1-205ENST00000564540 CSPG4Q6UVK1 2322 aa0.25□□□□□ -2.37
UBR1-205ENST00000564540 HUWE1Q7Z6Z7 4374 aaKnown RBP0.24□□□□□ -2.37
UBR1-205ENST00000564540 TJP1Q07157 1748 aa0.24□□□□□ -2.37
UBR1-205ENST00000564540 DDX60LQ5H9U9 1706 aaKnown RBP0.24□□□□□ -2.37
UBR1-205ENST00000564540 KMT2AQ03164 3969 aa0.24□□□□□ -2.37
UBR1-205ENST00000564540 KCNQ1DNQ9H478 68 aa0.24□□□□□ -2.37
UBR1-205ENST00000564540 WNK2Q9Y3S1 2297 aa0.24□□□□□ -2.37
UBR1-205ENST00000564540 DEFB131BA0A096LNP1 70 aa0.23□□□□□ -2.37
UBR1-205ENST00000564540 H0YAA0 97 aa0.23□□□□□ -2.37
UBR1-205ENST00000564540 GNG13Q9P2W3 67 aa0.23□□□□□ -2.37
UBR1-205ENST00000564540 NRAPQ86VF7 1730 aa0.23□□□□□ -2.37
UBR1-205ENST00000564540 NCOR2Q9Y618 2525 aa0.23□□□□□ -2.37
UBR1-205ENST00000564540 RALGAPBQ86X10 1494 aa0.22□□□□□ -2.37
UBR1-205ENST00000564540 M0R2T5 61 aa0.22□□□□□ -2.37
UBR1-205ENST00000564540 UBL5Q9BZL1 73 aa0.22□□□□□ -2.37
UBR1-205ENST00000564540 MROH1Q8NDA8 1641 aa0.22□□□□□ -2.37
UBR1-205ENST00000564540 SMIM31A0A1B0GVY4 71 aa0.21□□□□□ -2.38
UBR1-205ENST00000564540 CRIP1P50238 77 aa0.21□□□□□ -2.38
UBR1-205ENST00000564540 EFCAB5A4FU69 1503 aa0.21□□□□□ -2.38
UBR1-205ENST00000564540 MAST4O15021 2626 aa0.21□□□□□ -2.38
UBR1-205ENST00000564540 REV3LO60673 3130 aa0.21□□□□□ -2.38
UBR1-205ENST00000564540 UBR5O95071 2799 aaPredicted RBP0.21□□□□□ -2.38
UBR1-205ENST00000564540 HFM1A2PYH4 1435 aa0.21□□□□□ -2.38
UBR1-205ENST00000564540 NHSQ6T4R5 1651 aa0.21□□□□□ -2.38
UBR1-205ENST00000564540 HIVEP3Q5T1R4 2406 aa0.21□□□□□ -2.38
UBR1-205ENST00000564540 RNF17Q9BXT8 1623 aaKnown RBP0.2□□□□□ -2.38
UBR1-205ENST00000564540 PLXNC1O60486 1568 aa0.2□□□□□ -2.38
UBR1-205ENST00000564540 ABCA2Q9BZC7 2435 aa0.2□□□□□ -2.38
UBR1-205ENST00000564540 MYCBP2O75592 4640 aa0.2□□□□□ -2.38
UBR1-205ENST00000564540 A0A087WWC5 75 aa0.19□□□□□ -2.38
UBR1-205ENST00000564540 MRPL33O75394 65 aaKnown RBP0.19□□□□□ -2.38
UBR1-205ENST00000564540 SPRR2DP22532 72 aa0.19□□□□□ -2.38
UBR1-205ENST00000564540 IGSF10Q6WRI0 2623 aa0.19□□□□□ -2.38
UBR1-205ENST00000564540 SPTA1P02549 2419 aa0.19□□□□□ -2.38
UBR1-205ENST00000564540 CACNA1AO00555 2505 aa0.19□□□□□ -2.38
UBR1-205ENST00000564540 KNL1Q8NG31 2342 aa0.19□□□□□ -2.38
UBR1-205ENST00000564540 LPAP08519 4548 aa0.18□□□□□ -2.38
UBR1-205ENST00000564540 DEPDC5O75140 1603 aa0.18□□□□□ -2.38
UBR1-205ENST00000564540 ETDCA0A1B0GVM5 59 aa0.18□□□□□ -2.38
UBR1-205ENST00000564540 LYNX1G3V0Z9 82 aa0.18□□□□□ -2.38
UBR1-205ENST00000564540 DEFB135Q30KP9 77 aa0.18□□□□□ -2.38
UBR1-205ENST00000564540 PTPN13Q12923 2485 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms