RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 PDCD5O14737 125 aa0.42□□□□□ -2.34
CTDSPL2-211ENST00000561189 H1FX-AS1Q4G0G2 97 aa0.42□□□□□ -2.34
CTDSPL2-211ENST00000561189 ATP5EP2Q5VTU8 51 aa0.42□□□□□ -2.34
CTDSPL2-211ENST00000561189 WIZO95785 1651 aa0.42□□□□□ -2.34
CTDSPL2-211ENST00000561189 CCDC141Q6ZP82 1450 aa0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 ATRQ13535 2644 aa0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 CLIP1P30622 1438 aa0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 LRP1Q07954 4544 aaKnown RBP0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 TNRC6CQ9HCJ0 1690 aaKnown RBP0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 HMGA1P17096 107 aaKnown RBP0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 DEFB109BQ30KR1 87 aa0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 PKDREJQ9NTG1 2253 aa0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 CNOT1A5YKK6 2376 aaKnown RBP0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 ABCA9Q8IUA7 1624 aa0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 NRAPQ86VF7 1730 aa0.41□□□□□ -2.34
CTDSPL2-211ENST00000561189 NWD1Q149M9 1564 aa0.4□□□□□ -2.34
CTDSPL2-211ENST00000561189 CDC42BPGQ6DT37 1551 aa0.4□□□□□ -2.34
CTDSPL2-211ENST00000561189 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
CTDSPL2-211ENST00000561189 NESP48681 1621 aa0.4□□□□□ -2.35
CTDSPL2-211ENST00000561189 EIF2AK4Q9P2K8 1649 aaKnown RBP0.4□□□□□ -2.35
CTDSPL2-211ENST00000561189 COX8AP10176 69 aa0.4□□□□□ -2.35
CTDSPL2-211ENST00000561189 NCOR1O75376 2440 aa0.4□□□□□ -2.35
CTDSPL2-211ENST00000561189 USP24Q9UPU5 2620 aa0.4□□□□□ -2.35
CTDSPL2-211ENST00000561189 LMTK2Q8IWU2 1503 aa0.39□□□□□ -2.35
CTDSPL2-211ENST00000561189 ASXL1Q8IXJ9 1541 aa0.39□□□□□ -2.35
CTDSPL2-211ENST00000561189 DUOX2Q9NRD8 1548 aa0.39□□□□□ -2.35
CTDSPL2-211ENST00000561189 MROH1Q8NDA8 1641 aa0.39□□□□□ -2.35
CTDSPL2-211ENST00000561189 NDUFB1O75438 58 aa0.39□□□□□ -2.35
CTDSPL2-211ENST00000561189 HEPN1Q6WQI6 88 aa0.39□□□□□ -2.35
CTDSPL2-211ENST00000561189 DIP2AQ14689 1571 aa0.39□□□□□ -2.35
CTDSPL2-211ENST00000561189 UNC79Q9P2D8 2635 aa0.39□□□□□ -2.35
CTDSPL2-211ENST00000561189 C4AP0C0L4 1744 aa0.38□□□□□ -2.35
CTDSPL2-211ENST00000561189 C4BP0C0L5 1744 aa0.38□□□□□ -2.35
CTDSPL2-211ENST00000561189 LCE6AA0A183 80 aa0.38□□□□□ -2.35
CTDSPL2-211ENST00000561189 NDUFA4O00483 81 aa0.38□□□□□ -2.35
CTDSPL2-211ENST00000561189 NDUFA3O95167 84 aa0.38□□□□□ -2.35
CTDSPL2-211ENST00000561189 VWFP04275 2813 aa0.38□□□□□ -2.35
CTDSPL2-211ENST00000561189 HUWE1Q7Z6Z7 4374 aaKnown RBP0.38□□□□□ -2.35
CTDSPL2-211ENST00000561189 FAT2Q9NYQ8 4349 aa0.37□□□□□ -2.35
CTDSPL2-211ENST00000561189 TNXBP22105 4242 aa0.37□□□□□ -2.35
CTDSPL2-211ENST00000561189 CICQ96RK0 1608 aaPredicted RBP0.37□□□□□ -2.35
CTDSPL2-211ENST00000561189 UBR5O95071 2799 aaPredicted RBP0.37□□□□□ -2.35
CTDSPL2-211ENST00000561189 KNL1Q8NG31 2342 aa0.37□□□□□ -2.35
CTDSPL2-211ENST00000561189 REV3LO60673 3130 aa0.37□□□□□ -2.35
CTDSPL2-211ENST00000561189 SPTA1P02549 2419 aa0.36□□□□□ -2.35
CTDSPL2-211ENST00000561189 DDX60LQ5H9U9 1706 aaKnown RBP0.36□□□□□ -2.35
CTDSPL2-211ENST00000561189 PRKDCP78527 4128 aaKnown RBP0.36□□□□□ -2.35
CTDSPL2-211ENST00000561189 MDN1Q9NU22 5596 aa0.36□□□□□ -2.35
CTDSPL2-211ENST00000561189 RPL38P63173 70 aaKnown RBP0.36□□□□□ -2.35
CTDSPL2-211ENST00000561189 TJP1Q07157 1748 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 CSPG4Q6UVK1 2322 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 PHGR1C9JFL3 82 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 WFDC13Q8IUB5 93 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 OTOGQ6ZRI0 2925 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 KMT2DO14686 5537 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 MYCBP2O75592 4640 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 FAT4Q6V0I7 4981 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 CELSR1Q9NYQ6 3014 aa0.35□□□□□ -2.35
CTDSPL2-211ENST00000561189 TENM4Q6N022 2769 aa0.34□□□□□ -2.35
CTDSPL2-211ENST00000561189 CCL22O00626 93 aa0.34□□□□□ -2.36
CTDSPL2-211ENST00000561189 ENHOQ6UWT2 76 aa0.34□□□□□ -2.36
CTDSPL2-211ENST00000561189 WNK2Q9Y3S1 2297 aa0.34□□□□□ -2.36
CTDSPL2-211ENST00000561189 INO80Q9ULG1 1556 aaPredicted RBP0.33□□□□□ -2.36
CTDSPL2-211ENST00000561189 ANKRD50Q9ULJ7 1429 aa0.33□□□□□ -2.36
CTDSPL2-211ENST00000561189 GNG13Q9P2W3 67 aa0.33□□□□□ -2.36
CTDSPL2-211ENST00000561189 U3KQA8 63 aa0.33□□□□□ -2.36
CTDSPL2-211ENST00000561189 EFCAB5A4FU69 1503 aa0.33□□□□□ -2.36
CTDSPL2-211ENST00000561189 MUC2Q02817 5179 aa0.33□□□□□ -2.36
CTDSPL2-211ENST00000561189 PRM1P04553 51 aa0.32□□□□□ -2.36
CTDSPL2-211ENST00000561189 ATXN8Q156A1 80 aa0.32□□□□□ -2.36
CTDSPL2-211ENST00000561189 CDKN2A-AS1Q9UH64 79 aa0.32□□□□□ -2.36
CTDSPL2-211ENST00000561189 NCOR2Q9Y618 2525 aa0.32□□□□□ -2.36
CTDSPL2-211ENST00000561189 CCDC180Q9P1Z9 1646 aa0.31□□□□□ -2.36
CTDSPL2-211ENST00000561189 NHSQ6T4R5 1651 aa0.31□□□□□ -2.36
CTDSPL2-211ENST00000561189 PCLOQ9Y6V0 5065 aa0.31□□□□□ -2.36
CTDSPL2-211ENST00000561189 ABCA2Q9BZC7 2435 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 KMT2AQ03164 3969 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 PTPN13Q12923 2485 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 BSNQ9UPA5 3926 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 SMIM31A0A1B0GVY4 71 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 H0YAA0 97 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 SPINK4O60575 86 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 PRO3102Q9H379 93 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 HIVEP3Q5T1R4 2406 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 GLI2P10070 1586 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 ALMS1Q8TCU4 4167 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 RNF17Q9BXT8 1623 aaKnown RBP0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 PKD1L1Q8TDX9 2849 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 TRANK1O15050 2925 aa0.3□□□□□ -2.36
CTDSPL2-211ENST00000561189 RALGAPBQ86X10 1494 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 CACNA1AO00555 2505 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 ERICH3Q5RHP9 1530 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 CHD8Q9HCK8 2581 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 ABCA6Q8N139 1617 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 LOC730098B7Z3J9 87 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 C3orf79P0CE67 100 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 MAST4O15021 2626 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 IGSF10Q6WRI0 2623 aa0.29□□□□□ -2.36
CTDSPL2-211ENST00000561189 LINC00158P58513 81 aa0.28□□□□□ -2.36
CTDSPL2-211ENST00000561189 AKAP13Q12802 2813 aa0.28□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 206.7 ms