RNA–Protein interactions for RNA: ENST00000561189.1

CTDSPL2-211, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 742 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-211ENST00000561189 AEBP2Q6ZN18 517 aaPredicted RBP16.87■□□□□ 0.29
CTDSPL2-211ENST00000561189 CHIC1Q5VXU3 224 aa16.5■□□□□ 0.23
CTDSPL2-211ENST00000561189 PHF23Q9BUL5 403 aaPredicted RBP14.45□□□□□ -0.1
CTDSPL2-211ENST00000561189 SENP3Q9H4L4 574 aaPredicted RBP14.41□□□□□ -0.1
CTDSPL2-211ENST00000561189 PLPPR3Q6T4P5 718 aa13.38□□□□□ -0.27
CTDSPL2-211ENST00000561189 FOXD1Q16676 465 aa13.3□□□□□ -0.28
CTDSPL2-211ENST00000561189 PPP6R1Q9UPN7 881 aa12.72□□□□□ -0.37
CTDSPL2-211ENST00000561189 ADRA2BP18089 450 aa12.67□□□□□ -0.38
CTDSPL2-211ENST00000561189 PIAS4Q8N2W9 510 aaPredicted RBP12.5□□□□□ -0.41
CTDSPL2-211ENST00000561189 MSH5O43196 834 aa12.37□□□□□ -0.43
CTDSPL2-211ENST00000561189 POTEDQ86YR6 584 aa11.88□□□□□ -0.51
CTDSPL2-211ENST00000561189 SCAF1Q9H7N4 1312 aaKnown RBP11.72□□□□□ -0.53
CTDSPL2-211ENST00000561189 PPP4R3CPQ6ZMV5 832 aa11.72□□□□□ -0.53
CTDSPL2-211ENST00000561189 DMRT2Q9Y5R5 561 aa11.49□□□□□ -0.57
CTDSPL2-211ENST00000561189 MAPK8IP2Q13387 824 aaPredicted RBP11.48□□□□□ -0.57
CTDSPL2-211ENST00000561189 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
CTDSPL2-211ENST00000561189 NCBP3Q53F19 620 aaKnown RBP11.46□□□□□ -0.57
CTDSPL2-211ENST00000561189 KCNA4P22459 653 aa11.37□□□□□ -0.59
CTDSPL2-211ENST00000561189 RNF216Q9NWF9 866 aaPredicted RBP11.29□□□□□ -0.6
CTDSPL2-211ENST00000561189 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
CTDSPL2-211ENST00000561189 NPM3O75607 178 aaKnown RBP11.25□□□□□ -0.61
CTDSPL2-211ENST00000561189 DNAJC5BQ9UF47 199 aa11.21□□□□□ -0.61
CTDSPL2-211ENST00000561189 SLC4A1APQ9BWU0 796 aaKnown RBP10.83□□□□□ -0.68
CTDSPL2-211ENST00000561189 DCAF8L1A6NGE4 600 aa10.77□□□□□ -0.69
CTDSPL2-211ENST00000561189 SLC4A2P04920 1241 aa10.64□□□□□ -0.71
CTDSPL2-211ENST00000561189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.712e-6■■□□□ 14.1
CTDSPL2-211ENST00000561189 RNF39Q9H2S5 420 aa10.58□□□□□ -0.72
CTDSPL2-211ENST00000561189 FOXD4L1Q9NU39 408 aa10.55□□□□□ -0.72
CTDSPL2-211ENST00000561189 C1QBPQ07021 282 aaKnown RBP10.48□□□□□ -0.73
CTDSPL2-211ENST00000561189 U3KPZ7 1027 aaPredicted RBP10.48□□□□□ -0.73
CTDSPL2-211ENST00000561189 ZBTB22O15209 634 aa10.47□□□□□ -0.73
CTDSPL2-211ENST00000561189 CACNB1Q02641 598 aaPredicted RBP10.46□□□□□ -0.73
CTDSPL2-211ENST00000561189 MYCNP04198 464 aaPredicted RBP10.44□□□□□ -0.74
CTDSPL2-211ENST00000561189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.42□□□□□ -0.74
CTDSPL2-211ENST00000561189 HNRNPUL2Q1KMD3 747 aaKnown RBP10.42□□□□□ -0.74
CTDSPL2-211ENST00000561189 CSRNP3Q8WYN3 585 aa10.38□□□□□ -0.75
CTDSPL2-211ENST00000561189 EHMT2Q96KQ7 1210 aa10.38□□□□□ -0.75
CTDSPL2-211ENST00000561189 SAMD1Q6SPF0 538 aaPredicted RBP10.35□□□□□ -0.75
CTDSPL2-211ENST00000561189 APLP2Q06481 763 aa10.32□□□□□ -0.76
CTDSPL2-211ENST00000561189 ATXN8OSP0DMR3 200 aa10.28□□□□□ -0.76
CTDSPL2-211ENST00000561189 ZNF219Q9P2Y4 722 aaPredicted RBP10.15□□□□□ -0.78
CTDSPL2-211ENST00000561189 SPINK5Q9NQ38 1064 aaPredicted RBP10.12□□□□□ -0.79
CTDSPL2-211ENST00000561189 CAPN15O75808 1086 aa10.07□□□□□ -0.8
CTDSPL2-211ENST00000561189 ATF5Q9Y2D1 282 aaPredicted RBP10.05□□□□□ -0.8
CTDSPL2-211ENST00000561189 DSG3P32926 999 aa10.01□□□□□ -0.81
CTDSPL2-211ENST00000561189 TRHP20396 242 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-211ENST00000561189 POLA2Q14181 598 aa9.87□□□□□ -0.83
CTDSPL2-211ENST00000561189 ZBTB12Q9Y330 459 aaPredicted RBP9.85□□□□□ -0.83
CTDSPL2-211ENST00000561189 ABCB7O75027 752 aa9.83□□□□□ -0.84
CTDSPL2-211ENST00000561189 FBLN2P98095 1184 aa9.7□□□□□ -0.86
CTDSPL2-211ENST00000561189 MKRN4PQ13434 485 aaPredicted RBP9.67□□□□□ -0.86
CTDSPL2-211ENST00000561189 RBM42Q9BTD8 480 aaKnown RBP9.6□□□□□ -0.87
CTDSPL2-211ENST00000561189 SPDYE2BA6NHP3 402 aa9.56□□□□□ -0.88
CTDSPL2-211ENST00000561189 SPDYE6P0CI01 402 aa9.56□□□□□ -0.88
CTDSPL2-211ENST00000561189 SPDYE2Q495Y8 402 aa9.56□□□□□ -0.88
CTDSPL2-211ENST00000561189 OSCARQ8IYS5 282 aa9.54□□□□□ -0.88
CTDSPL2-211ENST00000561189 SSUH2Q9Y2M2 353 aa9.49□□□□□ -0.89
CTDSPL2-211ENST00000561189 AKT1S1Q96B36 256 aa9.46□□□□□ -0.9
CTDSPL2-211ENST00000561189 SPDYE4A6NLX3 237 aa9.42□□□□□ -0.9
CTDSPL2-211ENST00000561189 PROM2Q8N271 834 aa9.42□□□□□ -0.9
CTDSPL2-211ENST00000561189 ZNF692Q9BU19 519 aaPredicted RBP9.4□□□□□ -0.9
CTDSPL2-211ENST00000561189 FKBP8Q14318 412 aa9.32□□□□□ -0.92
CTDSPL2-211ENST00000561189 POTEHQ6S545 545 aa9.32□□□□□ -0.92
CTDSPL2-211ENST00000561189 REM2Q8IYK8 340 aaPredicted RBP9.31□□□□□ -0.92
CTDSPL2-211ENST00000561189 PABPN1Q86U42 306 aaKnown RBP eCLIP9.27□□□□□ -0.93
CTDSPL2-211ENST00000561189 SPDYE1Q8NFV5 336 aaPredicted RBP9.25□□□□□ -0.93
CTDSPL2-211ENST00000561189 STAG3Q9UJ98 1225 aa9.22□□□□□ -0.93
CTDSPL2-211ENST00000561189 PITPNM1O00562 1244 aa9.19□□□□□ -0.94
CTDSPL2-211ENST00000561189 CHRDL2Q6WN34 429 aa9.15□□□□□ -0.94
CTDSPL2-211ENST00000561189 FBXO3Q9UK99 471 aa9.13□□□□□ -0.95
CTDSPL2-211ENST00000561189 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
CTDSPL2-211ENST00000561189 CLEC11AQ9Y240 323 aa9.06□□□□□ -0.96
CTDSPL2-211ENST00000561189 PRR29P0C7W0 189 aa9.05□□□□□ -0.96
CTDSPL2-211ENST00000561189 PIP4P2Q8N4L2 257 aa9.02□□□□□ -0.97
CTDSPL2-211ENST00000561189 CREBZFQ9NS37 354 aa8.97□□□□□ -0.97
CTDSPL2-211ENST00000561189 VASPP50552 380 aaPredicted RBP8.96□□□□□ -0.98
CTDSPL2-211ENST00000561189 AMER1Q5JTC6 1135 aaPredicted RBP8.95□□□□□ -0.98
CTDSPL2-211ENST00000561189 PRKAR2AP13861 404 aaKnown RBP8.93□□□□□ -0.98
CTDSPL2-211ENST00000561189 PLEKHG5O94827 1062 aa8.91□□□□□ -0.98
CTDSPL2-211ENST00000561189 MNX1P50219 401 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-211ENST00000561189 ZBTB47Q9UFB7 747 aaPredicted RBP8.91□□□□□ -0.98
CTDSPL2-211ENST00000561189 MIER1Q8N108 512 aa8.87□□□□□ -0.99
CTDSPL2-211ENST00000561189 PLCD3Q8N3E9 789 aa8.87□□□□□ -0.99
CTDSPL2-211ENST00000561189 FARP1Q9Y4F1 1045 aaPredicted RBP8.87□□□□□ -0.99
CTDSPL2-211ENST00000561189 NPM1P06748 294 aaKnown RBP eCLIP8.84□□□□□ -0.99
CTDSPL2-211ENST00000561189 CHADLQ6NUI6 762 aa8.84□□□□□ -0.99
CTDSPL2-211ENST00000561189 IFNLR1Q8IU57 520 aaPredicted RBP8.81□□□□□ -1
CTDSPL2-211ENST00000561189 C19orf67A6NJJ6 358 aa8.78□□□□□ -1
CTDSPL2-211ENST00000561189 RTN4Q9NQC3 1192 aaKnown RBP8.78□□□□□ -1
CTDSPL2-211ENST00000561189 SP7Q8TDD2 431 aaPredicted RBP8.77□□□□□ -1.01
CTDSPL2-211ENST00000561189 NUBP1P53384 320 aa8.76□□□□□ -1.01
CTDSPL2-211ENST00000561189 SPOCK2Q92563 424 aa8.74□□□□□ -1.01
CTDSPL2-211ENST00000561189 HAX1O00165 279 aa8.72□□□□□ -1.01
CTDSPL2-211ENST00000561189 KLHL34Q8N239 644 aa8.71□□□□□ -1.02
CTDSPL2-211ENST00000561189 CLCN6P51797 869 aa8.69□□□□□ -1.02
CTDSPL2-211ENST00000561189 CD44P16070 742 aaKnown RBP8.68□□□□□ -1.02
CTDSPL2-211ENST00000561189 PAK3O75914 559 aaPredicted RBP8.67□□□□□ -1.02
CTDSPL2-211ENST00000561189 RASEFQ8IZ41 740 aa8.67□□□□□ -1.02
CTDSPL2-211ENST00000561189 GSE1Q14687 1217 aa8.66□□□□□ -1.02
CTDSPL2-211ENST00000561189 ZNF579Q8NAF0 562 aaKnown RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms