RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 A0A0B4J2C4 111 aa6.52□□□□□ -1.37
TPM1-227ENST00000560970 K7ERJ3 54 aa6.52□□□□□ -1.37
TPM1-227ENST00000560970 MEIG1Q5JSS6 88 aa6.52□□□□□ -1.37
TPM1-227ENST00000560970 C1orf137Q5JT78 98 aa6.52□□□□□ -1.37
TPM1-227ENST00000560970 C22orf24Q9Y442 160 aa6.52□□□□□ -1.37
TPM1-227ENST00000560970 ADAMTSL4-AS1Q5T5F5 129 aa6.51□□□□□ -1.37
TPM1-227ENST00000560970 MUSTN1Q8IVN3 82 aa6.51□□□□□ -1.37
TPM1-227ENST00000560970 Q8NDZ9 215 aa6.51□□□□□ -1.37
TPM1-227ENST00000560970 DIRC1Q969H9 104 aa6.51□□□□□ -1.37
TPM1-227ENST00000560970 A4D1N5 150 aa6.5□□□□□ -1.37
TPM1-227ENST00000560970 UBE2BP63146 152 aa6.5□□□□□ -1.37
TPM1-227ENST00000560970 VAMP3Q15836 100 aa6.5□□□□□ -1.37
TPM1-227ENST00000560970 RAB37Q96AX2 223 aa6.5□□□□□ -1.37
TPM1-227ENST00000560970 SND1-IT1Q9HBX3 110 aa6.5□□□□□ -1.37
TPM1-227ENST00000560970 IGLV5-37A0A075B6J1 123 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 A0A0U1RRA0 63 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 A0A1W2PPM0 123 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 H0Y9J4 135 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 H3BUT2 72 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 IGLV7-43P04211 117 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 CFC1BP0CG36 223 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 CFC1P0CG37 223 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 COX17Q14061 63 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 MRPL55Q7Z7F7 128 aaKnown RBP6.49□□□□□ -1.37
TPM1-227ENST00000560970 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
TPM1-227ENST00000560970 VPREB1P12018 145 aa6.48□□□□□ -1.37
TPM1-227ENST00000560970 FABP2P12104 132 aa6.48□□□□□ -1.37
TPM1-227ENST00000560970 PRR26Q8N8Z3 221 aa6.48□□□□□ -1.37
TPM1-227ENST00000560970 PRO1854Q9UHT4 67 aa6.48□□□□□ -1.37
TPM1-227ENST00000560970 GAGE10A6NGK3 116 aa6.47□□□□□ -1.37
TPM1-227ENST00000560970 LCE2BO14633 110 aa6.47□□□□□ -1.37
TPM1-227ENST00000560970 LINC00158P58513 81 aa6.47□□□□□ -1.37
TPM1-227ENST00000560970 LYRM7Q5U5X0 104 aa6.47□□□□□ -1.37
TPM1-227ENST00000560970 GTF2H5Q6ZYL4 71 aa6.47□□□□□ -1.37
TPM1-227ENST00000560970 LINC00167Q96N53 147 aa6.47□□□□□ -1.37
TPM1-227ENST00000560970 IGLV1-50A0A075B6I6 118 aa6.46□□□□□ -1.38
TPM1-227ENST00000560970 RPL37AP8A6NKH3 93 aa6.46□□□□□ -1.38
TPM1-227ENST00000560970 K7EP34 96 aa6.46□□□□□ -1.38
TPM1-227ENST00000560970 UBE2V1Q13404 147 aa6.46□□□□□ -1.38
TPM1-227ENST00000560970 MIR7-3HGQ8N6C7 128 aa6.46□□□□□ -1.38
TPM1-227ENST00000560970 DAND5Q8N907 189 aa6.46□□□□□ -1.38
TPM1-227ENST00000560970 TSPAN13O95857 204 aa6.45□□□□□ -1.38
TPM1-227ENST00000560970 NKAPP1Q8N9T2 125 aa6.45□□□□□ -1.38
TPM1-227ENST00000560970 NAA38Q9BRA0 125 aaKnown RBP6.45□□□□□ -1.38
TPM1-227ENST00000560970 SPCS1Q9Y6A9 102 aa6.45□□□□□ -1.38
TPM1-227ENST00000560970 KRTAP1-4P0C5Y4 121 aa6.44□□□□□ -1.38
TPM1-227ENST00000560970 NPC2P61916 151 aa6.44□□□□□ -1.38
TPM1-227ENST00000560970 SOSTDC1Q6X4U4 206 aa6.44□□□□□ -1.38
TPM1-227ENST00000560970 IGKV2-28A0A075B6P5 120 aa6.43□□□□□ -1.38
TPM1-227ENST00000560970 LOC107984156A0A0G2JMH3 177 aa6.43□□□□□ -1.38
TPM1-227ENST00000560970 IGKV2D-28P01615 120 aa6.43□□□□□ -1.38
TPM1-227ENST00000560970 RPL13AP40429 203 aaKnown RBP6.43□□□□□ -1.38
TPM1-227ENST00000560970 ARL17AQ8IVW1 177 aa6.43□□□□□ -1.38
TPM1-227ENST00000560970 NCR3O14931 201 aa6.41□□□□□ -1.38
TPM1-227ENST00000560970 BCE1O60756 84 aa6.41□□□□□ -1.38
TPM1-227ENST00000560970 Q1RN00 199 aa6.41□□□□□ -1.38
TPM1-227ENST00000560970 TRBV20-1A0A075B6N2 111 aa6.4□□□□□ -1.38
TPM1-227ENST00000560970 TRAV13-2A0A0B4J235 113 aa6.4□□□□□ -1.38
TPM1-227ENST00000560970 PSMB2P49721 201 aa6.4□□□□□ -1.38
TPM1-227ENST00000560970 PRR4Q16378 134 aa6.4□□□□□ -1.38
TPM1-227ENST00000560970 KRTAP13-1Q8IUC0 172 aa6.4□□□□□ -1.38
TPM1-227ENST00000560970 A0A0U1RQV1 116 aa6.39□□□□□ -1.39
TPM1-227ENST00000560970 H7C2G1 150 aa6.39□□□□□ -1.39
TPM1-227ENST00000560970 ZNF861PO60384 105 aa6.39□□□□□ -1.39
TPM1-227ENST00000560970 NDUFC2O95298 119 aa6.39□□□□□ -1.39
TPM1-227ENST00000560970 MUC2Q02817 5179 aa6.38□□□□□ -1.39
TPM1-227ENST00000560970 M0R378 163 aa6.38□□□□□ -1.39
TPM1-227ENST00000560970 COX6CP09669 75 aa6.38□□□□□ -1.39
TPM1-227ENST00000560970 TMEM126AQ9H061 195 aa6.38□□□□□ -1.39
TPM1-227ENST00000560970 TRIAP1O43715 76 aa6.37□□□□□ -1.39
TPM1-227ENST00000560970 SCGB1C2P0DMR2 95 aa6.37□□□□□ -1.39
TPM1-227ENST00000560970 PRLHP81277 87 aa6.36□□□□□ -1.39
TPM1-227ENST00000560970 TRBV10-3A0A0K0K1G6 114 aa6.35□□□□□ -1.39
TPM1-227ENST00000560970 RPL28P46779 137 aaKnown RBP6.35□□□□□ -1.39
TPM1-227ENST00000560970 UBE2AP49459 152 aa6.35□□□□□ -1.39
TPM1-227ENST00000560970 ATXN8Q156A1 80 aa6.35□□□□□ -1.39
TPM1-227ENST00000560970 FAM19A1Q7Z5A9 133 aa6.35□□□□□ -1.39
TPM1-227ENST00000560970 LINC00337Q8N6G1 96 aa6.35□□□□□ -1.39
TPM1-227ENST00000560970 F8W1H4 67 aa6.34□□□□□ -1.39
TPM1-227ENST00000560970 H3BMG7 143 aa6.34□□□□□ -1.39
TPM1-227ENST00000560970 PRYO14603 147 aa6.34□□□□□ -1.39
TPM1-227ENST00000560970 TCL1BO95988 128 aa6.34□□□□□ -1.39
TPM1-227ENST00000560970 TRBV10-2A0A0K0K1G8 114 aa6.33□□□□□ -1.4
TPM1-227ENST00000560970 KRTAP4-16G5E9R7 235 aaPredicted RBP6.32□□□□□ -1.4
TPM1-227ENST00000560970 SPRR1AP35321 89 aa6.32□□□□□ -1.4
TPM1-227ENST00000560970 KCNQ1DNQ9H478 68 aa6.32□□□□□ -1.4
TPM1-227ENST00000560970 PRO0461Q9UI25 63 aa6.32□□□□□ -1.4
TPM1-227ENST00000560970 A0A087X002 238 aa6.31□□□□□ -1.4
TPM1-227ENST00000560970 LST1O00453 97 aa6.31□□□□□ -1.4
TPM1-227ENST00000560970 OR13C6PQ8NH95 151 aa6.31□□□□□ -1.4
TPM1-227ENST00000560970 SMIM11BQ8TCY0 68 aa6.31□□□□□ -1.4
TPM1-227ENST00000560970 ANAPC11Q9NYG5 84 aa6.31□□□□□ -1.4
TPM1-227ENST00000560970 H0YGX0 51 aa6.3□□□□□ -1.4
TPM1-227ENST00000560970 IGLV6-57P01721 117 aa6.3□□□□□ -1.4
TPM1-227ENST00000560970 LCE2CQ5TA81 110 aa6.3□□□□□ -1.4
TPM1-227ENST00000560970 KRTAP9-2Q9BYQ4 174 aa6.3□□□□□ -1.4
TPM1-227ENST00000560970 TRACP01848 142 aa6.29□□□□□ -1.4
TPM1-227ENST00000560970 S100A7L2Q5SY68 101 aa6.29□□□□□ -1.4
TPM1-227ENST00000560970 CBY1Q9Y3M2 126 aa6.29□□□□□ -1.4
TPM1-227ENST00000560970 C9JAW5 83 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms