RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	ALS2	Q96Q42	1657 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	LINC00959	A0A1B0GUT2	108 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	FAM103A1	Q9BTL3	118 aa	Known RBP	0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	TMEM167B	Q9NRX6	74 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	QSER1	Q2KHR3	1735 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	TIAM2	Q8IVF5	1701 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	LRP6	O75581	1613 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	NHSL1	Q5SYE7	1610 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	ABCA6	Q8N139	1617 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	RNF17	Q9BXT8	1623 aa	Known RBP	0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	ABCC6	O95255	1503 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	CPS1	P31327	1500 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	KIAA0586	Q9BVV6	1533 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	AKAP6	Q13023	2319 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	ARFGEF2	Q9Y6D5	1785 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	SCN7A	Q01118	1682 aa		0.37	□□□□□ -2.35
SLTM-223	ENST00000560532	SSC5D	A1L4H1	1573 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	DIP2A	Q14689	1571 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	NWD1	Q149M9	1564 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	UGGT1	Q9NYU2	1555 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	PLXNB2	O15031	1838 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	ABCA12	Q86UK0	2595 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	PRH1	P02810	166 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	FCER1G	P30273	86 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	TOMM5	Q8N4H5	51 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	MRPL34	Q9BQ48	92 aa	Known RBP	0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	ABRACL	Q9P1F3	81 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	PRO0255	Q9UI72	69 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	ZFHX3	Q15911	3703 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	BCOR	Q6W2J9	1755 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	PIEZO1	Q92508	2521 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	PIEZO2	Q9H5I5	2752 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	GVINP1	Q7Z2Y8	2422 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	PDE4DIP	Q5VU43	2346 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	PCNX1	Q96RV3	2341 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	PTPN13	Q12923	2485 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	USF3	Q68DE3	2245 aa		0.36	□□□□□ -2.35
SLTM-223	ENST00000560532	RICTOR	Q6R327	1708 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	ZNF462	Q96JM2	2506 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	MADD	Q8WXG6	1647 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	COL14A1	Q05707	1796 aa	Known RBP	0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	PAPPA2	Q9BXP8	1791 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	EFCAB6	Q5THR3	1501 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	C3	P01024	1663 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	PREX1	Q8TCU6	1659 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	LINC01546	A6NGU7	62 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	IGIP	A6NJ69	53 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532		I3L2K1	104 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	KRTAP19-3	Q7Z4W3	81 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	PRO3102	Q9H379	93 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	TSC2	P49815	1807 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	ZNF236	Q9UL36	1845 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	ABCC8	Q09428	1581 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	LY75	O60449	1722 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	ASH1L	Q9NR48	2969 aa	Known RBP	0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	ABCA2	Q9BZC7	2435 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	CHD8	Q9HCK8	2581 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	DEPDC5	O75140	1603 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	BIVM-ERCC5	R4GMW8	1640 aa		0.35	□□□□□ -2.35
SLTM-223	ENST00000560532	BDP1	A6H8Y1	2624 aa		0.34	□□□□□ -2.35
SLTM-223	ENST00000560532	CROCC2	H7BZ55	1655 aa		0.34	□□□□□ -2.35
SLTM-223	ENST00000560532	WIZ	O95785	1651 aa		0.34	□□□□□ -2.35
SLTM-223	ENST00000560532	KIF1A	Q12756	1690 aa		0.34	□□□□□ -2.35
SLTM-223	ENST00000560532	BPTF	Q12830	3046 aa		0.34	□□□□□ -2.35
SLTM-223	ENST00000560532		A0A0D9SG42	100 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	SMIM27	A0A1W2PRY6	76 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532		H3BUA1	57 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532		M0R1W7	72 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	POLR1A	O95602	1720 aa	Predicted RBP	0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	LINC00158	P58513	81 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	FMN2	Q9NZ56	1722 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	MEGF8	Q7Z7M0	2845 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	NES	P48681	1621 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	ABCA5	Q8WWZ7	1642 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	POLQ	O75417	2590 aa		0.34	□□□□□ -2.36
SLTM-223	ENST00000560532	KNL1	Q8NG31	2342 aa		0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	TRPM2	O94759	1503 aa		0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	PARP4	Q9UKK3	1724 aa	Known RBP	0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	GLI2	P10070	1586 aa		0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	IQGAP2	Q13576	1575 aa		0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	NCOR1	O75376	2440 aa		0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	LAMC1	P11047	1609 aa		0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	WNK1	Q9H4A3	2382 aa		0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	MROH2A	A6NES4	1674 aa		0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	DDX60L	Q5H9U9	1706 aa	Known RBP	0.33	□□□□□ -2.36
SLTM-223	ENST00000560532	APC2	O95996	2303 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	ZNF292	O60281	2723 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	MUC5AC	P98088	5654 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	PHGR1	C9JFL3	82 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	SPRR1B	P22528	89 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	SPRR1A	P35321	89 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	CRIP1	P50238	77 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	KRTAP21-1	Q3LI58	79 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	MINOS1	Q5TGZ0	78 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	SPINK6	Q6UWN8	80 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	DEFB105A	Q8NG35	78 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	C6orf48	Q9UBA6	75 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	CSPG4	Q6UVK1	2322 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	DOT1L	Q8TEK3	1739 aa		0.32	□□□□□ -2.36
SLTM-223	ENST00000560532	AGL	P35573	1532 aa		0.32	□□□□□ -2.36

Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms