RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 COX7BP24311 80 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 ETDBQ3ZM63 59 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 NMSQ5H8A3 153 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 COL5A1-AS1Q5SY13 56 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 NCMAPQ5T1S8 102 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 HEPN1Q6WQI6 88 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 ZNF720Q7Z2F6 126 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 AP4S1Q9Y587 144 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 TROQ12816 1431 aaPredicted RBP-0.33□□□□□ -2.46
SPG11-222ENST00000560435 CNTLNQ9NXG0 1405 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 MYO18BQ8IUG5 2567 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.33□□□□□ -2.46
SPG11-222ENST00000560435 CUBNO60494 3623 aa-0.33□□□□□ -2.46
SPG11-222ENST00000560435 UTP20O75691 2785 aaKnown RBP-0.34□□□□□ -2.46
SPG11-222ENST00000560435 HERC2O95714 4834 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 LYSTQ99698 3801 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 BCORQ6W2J9 1755 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 GCN1Q92616 2671 aaKnown RBP-0.34□□□□□ -2.46
SPG11-222ENST00000560435 UQCRHLA0A096LP55 91 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 H0YGG7 62 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 M0R143 59 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 NDUFA3O95167 84 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 HMGN2P05204 90 aaKnown RBP-0.34□□□□□ -2.46
SPG11-222ENST00000560435 FAUP35544 74 aaKnown RBP-0.34□□□□□ -2.46
SPG11-222ENST00000560435 PDE4DIPQ5VU43 2346 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 CRYBG1Q9Y4K1 1723 aa-0.34□□□□□ -2.46
SPG11-222ENST00000560435 ATP10BO94823 1461 aa-0.35□□□□□ -2.46
SPG11-222ENST00000560435 QSER1Q2KHR3 1735 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 UBR4Q5T4S7 5183 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 DNAH9Q9NYC9 4486 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 VPS8Q8N3P4 1428 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 GYPAP02724 150 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 C20orf78Q9BR46 151 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 RGPD8O14715 1765 aaPredicted RBP-0.35□□□□□ -2.47
SPG11-222ENST00000560435 COL14A1Q05707 1796 aaKnown RBP-0.35□□□□□ -2.47
SPG11-222ENST00000560435 RGPD5Q99666 1765 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 VPS13DQ5THJ4 4388 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 ATP7BP35670 1465 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 ABCC10Q5T3U5 1492 aa-0.35□□□□□ -2.47
SPG11-222ENST00000560435 PEG3Q9GZU2 1588 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 KIF20BQ96Q89 1820 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 AKAP9Q99996 3911 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 MYH4Q9Y623 1939 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 CLTCQ00610 1675 aaKnown RBP-0.36□□□□□ -2.47
SPG11-222ENST00000560435 PREX1Q8TCU6 1659 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 NEXMIFQ5QGS0 1516 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 A0A1B0GUT8 65 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 C9orf92A6NGG3 77 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 SMIM11AP58511 58 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 GAFA1Q96PS6 74 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 SNHG12Q9BXW3 62 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 UBR3Q6ZT12 1888 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 ALKQ9UM73 1620 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 EPPK1P58107 5090 aaKnown RBP-0.36□□□□□ -2.47
SPG11-222ENST00000560435 MUC17Q685J3 4493 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 RGPD1P0DJD0 1748 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 NBEAL2Q6ZNJ1 2754 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 LRRC9Q6ZRR7 1453 aa-0.36□□□□□ -2.47
SPG11-222ENST00000560435 RGPD2P0DJD1 1756 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 CEP162Q5TB80 1403 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 TEX15Q9BXT5 2789 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 DNAH3Q8TD57 4116 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 MGAM2Q2M2H8 2515 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 PKD1L3Q7Z443 1732 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 IQCF6A8MYZ5 107 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 C3orf79P0CE67 100 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 PKIAP61925 76 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 RPL38P63173 70 aaKnown RBP-0.37□□□□□ -2.47
SPG11-222ENST00000560435 PLGLAQ15195 96 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 PYY3Q5JQD4 70 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 NEBP20929 6669 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 WIZO95785 1651 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 MTORP42345 2549 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 LRRK2Q5S007 2527 aa-0.37□□□□□ -2.47
SPG11-222ENST00000560435 LRRC7Q96NW7 1537 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 TRAV21A0A0B4J279 112 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 MYMXA0A1B0GTQ4 84 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 H3BNG1 76 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 S100A8P05109 93 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 PEA15Q15121 130 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 BAZ1AQ9NRL2 1556 aaPredicted RBP-0.38□□□□□ -2.47
SPG11-222ENST00000560435 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.38□□□□□ -2.47
SPG11-222ENST00000560435 APOBP04114 4563 aaKnown RBP-0.38□□□□□ -2.47
SPG11-222ENST00000560435 C4AP0C0L4 1744 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 C4BP0C0L5 1744 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 UBR1Q8IWV7 1749 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 ANKRD26Q9UPS8 1709 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 MYO3AQ8NEV4 1616 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 USP32Q8NFA0 1604 aa-0.38□□□□□ -2.47
SPG11-222ENST00000560435 FRYQ5TBA9 3013 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 TNRC6CQ9HCJ0 1690 aaKnown RBP-0.39□□□□□ -2.47
SPG11-222ENST00000560435 PLXNC1O60486 1568 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 PLIN4Q96Q06 1357 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 A0A0C4DFX4 3053 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 TRIOO75962 3097 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 LCE6AA0A183 80 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 LYNX1G3V0Z9 82 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 H0YAA0 97 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 NDUFB1O75438 58 aa-0.39□□□□□ -2.47
SPG11-222ENST00000560435 CYB5AP00167 134 aa-0.39□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms