RNA–Protein interactions for RNA: ENST00000557085.1

PSMC6-213, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-213ENST00000557085 LRBAP50851 2863 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 A8MTW9 85 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 TMEM262E9PQX1 116 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 M0QY20 66 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 M0R2P5 195 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 INE1O15225 51 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 COX6B1P14854 86 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 COX7CP15954 63 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 UBE2D1P51668 147 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 MIR22HGQ0VDD5 57 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 DEFB112Q30KQ8 113 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 SPANXDQ9BXN6 97 aa2.14□□□□□ -2.07
PSMC6-213ENST00000557085 TRAV12-3A0A0B4J271 114 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 A0A0J9YY99 117 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 TRBV6-4A0A1B0GX49 114 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 COX6CP09669 75 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 IFITM1P13164 125 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 ZNF56Q15929 161 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 TMEM170BQ5T4T1 132 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 TEN1Q86WV5 123 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 RPL39LQ96EH5 51 aaKnown RBP2.13□□□□□ -2.07
PSMC6-213ENST00000557085 LINC01600Q96MT4 127 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 AMELXQ99217 191 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 PRO1854Q9UHT4 67 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 ERG28Q9UKR5 140 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 DOPEY1Q5JWR5 2465 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 MED13LQ71F56 2210 aa2.13□□□□□ -2.07
PSMC6-213ENST00000557085 NCOR2Q9Y618 2525 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 IGKV3-7A0A075B6H7 116 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 IGKV3D-7A0A0C4DH55 119 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 IGKV3OR2-268A0A0C4DH90 116 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 TRBV10-1A0A0K0K1A3 114 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 IGHV3-30P01768 117 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 IGHV3-30-5P0DP03 117 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 UBE2D3P61077 147 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 UBE2D2P62837 147 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 FAM74A4Q5TZK3 123 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 CFAP126Q5VTH2 177 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 NDUFA11Q86Y39 141 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 SBSPONQ8IVN8 264 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 PPDPFLQ8WWR9 84 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 CHD8Q9HCK8 2581 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 ACACBO00763 2458 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 ASH1LQ9NR48 2969 aaKnown RBP2.12□□□□□ -2.07
PSMC6-213ENST00000557085 CACNA1AO00555 2505 aa2.12□□□□□ -2.07
PSMC6-213ENST00000557085 SPG11Q96JI7 2443 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 COL6A6A6NMZ7 2263 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.11□□□□□ -2.072e-6■■■■□ 24.7
PSMC6-213ENST00000557085 TRAV12-2A0A075B6T6 113 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 A0A096LNT2 108 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 LOC107984156A0A0G2JMH3 177 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 TRBV30A0A0K0K1B3 111 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 IGHV3-33P01772 117 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 PRB4P10163 310 aaPredicted RBP2.11□□□□□ -2.07
PSMC6-213ENST00000557085 DEFB131AP59861 70 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 RPL39P62891 51 aaKnown RBP2.11□□□□□ -2.07
PSMC6-213ENST00000557085 WFDC2Q14508 124 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 ATXN8Q156A1 80 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 SPINK13Q1W4C9 94 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 DEFB114Q30KQ6 69 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 ETDBQ3ZM63 59 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 SFTA2Q6UW10 78 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 ARL17AQ8IVW1 177 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 DYNLRB2Q8TF09 96 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 USP9YO00507 2555 aaPredicted RBP2.11□□□□□ -2.07
PSMC6-213ENST00000557085 SPTBN4Q9H254 2564 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 DCHS2Q6V1P9 2916 aa2.11□□□□□ -2.07
PSMC6-213ENST00000557085 MYO18BQ8IUG5 2567 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 ITPR1Q14643 2758 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 HIVEP3Q5T1R4 2406 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 NAV2Q8IVL1 2488 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 CASC2Q6XLA1 102 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 MUSTN1Q8IVN3 82 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 TMEM263Q8WUH6 116 aaKnown RBP2.1□□□□□ -2.07
PSMC6-213ENST00000557085 NDUFA12Q9UI09 145 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 HRNRQ86YZ3 2850 aaPredicted RBP2.1□□□□□ -2.07
PSMC6-213ENST00000557085 PKD1L2Q7Z442 2459 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 CFAP46Q8IYW2 2715 aa2.1□□□□□ -2.07
PSMC6-213ENST00000557085 MAP1AP78559 2803 aaPredicted RBP2.09□□□□□ -2.07
PSMC6-213ENST00000557085 COL12A1Q99715 3063 aa2.09□□□□□ -2.07
PSMC6-213ENST00000557085 NDUFA1O15239 70 aa2.09□□□□□ -2.07
PSMC6-213ENST00000557085 ACYP1P07311 99 aa2.09□□□□□ -2.07
PSMC6-213ENST00000557085 HTN1P15515 57 aa2.09□□□□□ -2.07
PSMC6-213ENST00000557085 DEFB1P60022 68 aa2.09□□□□□ -2.07
PSMC6-213ENST00000557085 UBE2D4Q9Y2X8 147 aa2.09□□□□□ -2.07
PSMC6-213ENST00000557085 AKAP6Q13023 2319 aa2.09□□□□□ -2.07
PSMC6-213ENST00000557085 HIVEP2P31629 2446 aa2.09□□□□□ -2.08
PSMC6-213ENST00000557085 USP9XQ93008 2570 aaPredicted RBP2.08□□□□□ -2.08
PSMC6-213ENST00000557085 DCHS1Q96JQ0 3298 aa2.08□□□□□ -2.08
PSMC6-213ENST00000557085 FLNCQ14315 2725 aa2.08□□□□□ -2.08
PSMC6-213ENST00000557085 RELNP78509 3460 aa2.08□□□□□ -2.08
PSMC6-213ENST00000557085 TRAV13-2A0A0B4J235 113 aa2.08□□□□□ -2.08
PSMC6-213ENST00000557085 MYO9AB2RTY4 2548 aa2.08□□□□□ -2.08
PSMC6-213ENST00000557085 LRRK2Q5S007 2527 aa2.08□□□□□ -2.08
PSMC6-213ENST00000557085 CSPG4Q6UVK1 2322 aa2.07□□□□□ -2.08
PSMC6-213ENST00000557085 TRGV1A0A0A0MS02 117 aa2.07□□□□□ -2.08
PSMC6-213ENST00000557085 H0YGX0 51 aa2.07□□□□□ -2.08
PSMC6-213ENST00000557085 SNCGO76070 127 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms