RNA–Protein interactions for RNA: ENST00000557085.1

PSMC6-213, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 2

Gene PSMC6, Length 890 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-213ENST00000557085 AEBP2Q6ZN18 517 aaPredicted RBP24.15■■□□□ 1.46
PSMC6-213ENST00000557085 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
PSMC6-213ENST00000557085 SENP3Q9H4L4 574 aaPredicted RBP20.63■□□□□ 0.89
PSMC6-213ENST00000557085 PHF23Q9BUL5 403 aaPredicted RBP20.34■□□□□ 0.85
PSMC6-213ENST00000557085 FOXD1Q16676 465 aa19.28■□□□□ 0.68
PSMC6-213ENST00000557085 POTEDQ86YR6 584 aa18.23■□□□□ 0.51
PSMC6-213ENST00000557085 MSH5O43196 834 aa18.14■□□□□ 0.49
PSMC6-213ENST00000557085 PLPPR3Q6T4P5 718 aa17.95■□□□□ 0.46
PSMC6-213ENST00000557085 PIAS4Q8N2W9 510 aaPredicted RBP17.94■□□□□ 0.46
PSMC6-213ENST00000557085 PPP6R1Q9UPN7 881 aa17.81■□□□□ 0.44
PSMC6-213ENST00000557085 ADRA2BP18089 450 aa17.74■□□□□ 0.43
PSMC6-213ENST00000557085 MAPK8IP2Q13387 824 aaPredicted RBP16.4■□□□□ 0.22
PSMC6-213ENST00000557085 DMRT2Q9Y5R5 561 aa16.32■□□□□ 0.2
PSMC6-213ENST00000557085 SCAF1Q9H7N4 1312 aaKnown RBP16.21■□□□□ 0.19
PSMC6-213ENST00000557085 CACNB1Q02641 598 aaPredicted RBP15.77■□□□□ 0.12
PSMC6-213ENST00000557085 PPP4R3CPQ6ZMV5 832 aa15.7■□□□□ 0.1
PSMC6-213ENST00000557085 DCAF8L1A6NGE4 600 aa15.69■□□□□ 0.1
PSMC6-213ENST00000557085 HOXD11P31277 338 aaPredicted RBP15.6■□□□□ 0.09
PSMC6-213ENST00000557085 CNKSR2Q8WXI2 1034 aa15.47■□□□□ 0.07
PSMC6-213ENST00000557085 RNF39Q9H2S5 420 aa15.46■□□□□ 0.07
PSMC6-213ENST00000557085 RNF216Q9NWF9 866 aaPredicted RBP15.4■□□□□ 0.06
PSMC6-213ENST00000557085 C1QBPQ07021 282 aaKnown RBP15.21■□□□□ 0.03
PSMC6-213ENST00000557085 DNAJC5BQ9UF47 199 aa15.1■□□□□ 0.01
PSMC6-213ENST00000557085 NCBP3Q53F19 620 aaKnown RBP15.07■□□□□ 0
PSMC6-213ENST00000557085 KCNA4P22459 653 aa15.01□□□□□ -0.01
PSMC6-213ENST00000557085 EHMT2Q96KQ7 1210 aa14.9□□□□□ -0.02
PSMC6-213ENST00000557085 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.88□□□□□ -0.03
PSMC6-213ENST00000557085 NPM3O75607 178 aaKnown RBP14.79□□□□□ -0.04
PSMC6-213ENST00000557085 U3KPZ7 1027 aaPredicted RBP14.53□□□□□ -0.08
PSMC6-213ENST00000557085 SLC4A1APQ9BWU0 796 aaKnown RBP14.44□□□□□ -0.1
PSMC6-213ENST00000557085 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
PSMC6-213ENST00000557085 SPINK5Q9NQ38 1064 aaPredicted RBP14.42□□□□□ -0.1
PSMC6-213ENST00000557085 CAPN15O75808 1086 aa14.4□□□□□ -0.1
PSMC6-213ENST00000557085 DSG3P32926 999 aa14.38□□□□□ -0.11
PSMC6-213ENST00000557085 POTEHQ6S545 545 aa14.23□□□□□ -0.13
PSMC6-213ENST00000557085 SLC4A2P04920 1241 aa14.2□□□□□ -0.14
PSMC6-213ENST00000557085 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
PSMC6-213ENST00000557085 APLP2Q06481 763 aa14.07□□□□□ -0.16
PSMC6-213ENST00000557085 ABCB7O75027 752 aa14.05□□□□□ -0.16
PSMC6-213ENST00000557085 ZNF219Q9P2Y4 722 aaPredicted RBP14.04□□□□□ -0.16
PSMC6-213ENST00000557085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14□□□□□ -0.17
PSMC6-213ENST00000557085 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
PSMC6-213ENST00000557085 SAMD1Q6SPF0 538 aaPredicted RBP13.91□□□□□ -0.18
PSMC6-213ENST00000557085 ZBTB22O15209 634 aa13.85□□□□□ -0.19
PSMC6-213ENST00000557085 FOXD4L1Q9NU39 408 aa13.75□□□□□ -0.21
PSMC6-213ENST00000557085 RBM42Q9BTD8 480 aaKnown RBP13.72□□□□□ -0.21
PSMC6-213ENST00000557085 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
PSMC6-213ENST00000557085 POLA2Q14181 598 aa13.67□□□□□ -0.22
PSMC6-213ENST00000557085 CHRDL2Q6WN34 429 aa13.55□□□□□ -0.24
PSMC6-213ENST00000557085 ATF5Q9Y2D1 282 aaPredicted RBP13.42□□□□□ -0.26
PSMC6-213ENST00000557085 AKT1S1Q96B36 256 aa13.34□□□□□ -0.27
PSMC6-213ENST00000557085 ZBTB12Q9Y330 459 aaPredicted RBP13.33□□□□□ -0.28
PSMC6-213ENST00000557085 ATXN8OSP0DMR3 200 aa13.3□□□□□ -0.28
PSMC6-213ENST00000557085 AMER1Q5JTC6 1135 aaPredicted RBP13.27□□□□□ -0.29
PSMC6-213ENST00000557085 SLC24A1O60721 1099 aa13.26□□□□□ -0.29
PSMC6-213ENST00000557085 REM2Q8IYK8 340 aaPredicted RBP13.24□□□□□ -0.29
PSMC6-213ENST00000557085 OSCARQ8IYS5 282 aa13.23□□□□□ -0.29
PSMC6-213ENST00000557085 RTN4Q9NQC3 1192 aaKnown RBP13.22□□□□□ -0.29
PSMC6-213ENST00000557085 SP7Q8TDD2 431 aaPredicted RBP13.19□□□□□ -0.3
PSMC6-213ENST00000557085 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
PSMC6-213ENST00000557085 PITPNM1O00562 1244 aa13.09□□□□□ -0.31
PSMC6-213ENST00000557085 HAX1O00165 279 aa13.03□□□□□ -0.32
PSMC6-213ENST00000557085 FXR2P51116 673 aaKnown RBP eCLIP13.03□□□□□ -0.32
PSMC6-213ENST00000557085 FKBP8Q14318 412 aa12.96□□□□□ -0.33
PSMC6-213ENST00000557085 SPDYE2BA6NHP3 402 aa12.89□□□□□ -0.35
PSMC6-213ENST00000557085 SPDYE6P0CI01 402 aa12.89□□□□□ -0.35
PSMC6-213ENST00000557085 FBLN2P98095 1184 aa12.89□□□□□ -0.35
PSMC6-213ENST00000557085 SPDYE2Q495Y8 402 aa12.89□□□□□ -0.35
PSMC6-213ENST00000557085 EVX2Q03828 476 aa12.85□□□□□ -0.35
PSMC6-213ENST00000557085 MKRN4PQ13434 485 aaPredicted RBP12.77□□□□□ -0.37
PSMC6-213ENST00000557085 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
PSMC6-213ENST00000557085 PRKAR2AP13861 404 aaKnown RBP12.76□□□□□ -0.37
PSMC6-213ENST00000557085 SPDYE1Q8NFV5 336 aaPredicted RBP12.75□□□□□ -0.37
PSMC6-213ENST00000557085 ZNF692Q9BU19 519 aaPredicted RBP12.72□□□□□ -0.37
PSMC6-213ENST00000557085 SSUH2Q9Y2M2 353 aa12.69□□□□□ -0.38
PSMC6-213ENST00000557085 C19orf67A6NJJ6 358 aa12.63□□□□□ -0.39
PSMC6-213ENST00000557085 CHADLQ6NUI6 762 aa12.56□□□□□ -0.4
PSMC6-213ENST00000557085 GABBR2O75899 941 aa12.53□□□□□ -0.4
PSMC6-213ENST00000557085 PABPN1Q86U42 306 aaKnown RBP eCLIP12.52□□□□□ -0.41
PSMC6-213ENST00000557085 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
PSMC6-213ENST00000557085 LHX8Q68G74 356 aa12.39□□□□□ -0.43
PSMC6-213ENST00000557085 SPDYE4A6NLX3 237 aa12.35□□□□□ -0.43
PSMC6-213ENST00000557085 CD44P16070 742 aaKnown RBP12.33□□□□□ -0.44
PSMC6-213ENST00000557085 FBXO3Q9UK99 471 aa12.33□□□□□ -0.44
PSMC6-213ENST00000557085 FARP1Q9Y4F1 1045 aaPredicted RBP12.33□□□□□ -0.44
PSMC6-213ENST00000557085 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
PSMC6-213ENST00000557085 PROM2Q8N271 834 aa12.21□□□□□ -0.45
PSMC6-213ENST00000557085 CLCN6P51797 869 aa12.2□□□□□ -0.46
PSMC6-213ENST00000557085 PLCB2Q00722 1185 aa12.2□□□□□ -0.46
PSMC6-213ENST00000557085 DCBLD2Q96PD2 775 aa12.13□□□□□ -0.47
PSMC6-213ENST00000557085 VASPP50552 380 aaPredicted RBP12.12□□□□□ -0.47
PSMC6-213ENST00000557085 CREBZFQ9NS37 354 aa12.12□□□□□ -0.47
PSMC6-213ENST00000557085 ZRANB1Q9UGI0 708 aa12.12□□□□□ -0.47
PSMC6-213ENST00000557085 STAG3Q9UJ98 1225 aa12.12□□□□□ -0.47
PSMC6-213ENST00000557085 ZNF579Q8NAF0 562 aaKnown RBP12.11□□□□□ -0.47
PSMC6-213ENST00000557085 IFNLR1Q8IU57 520 aaPredicted RBP12.01□□□□□ -0.49
PSMC6-213ENST00000557085 GALR2O43603 387 aaPredicted RBP12□□□□□ -0.49
PSMC6-213ENST00000557085 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
PSMC6-213ENST00000557085 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
PSMC6-213ENST00000557085 PKD2Q13563 968 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms